FFCP PHASE1:Hg19::chr8:103251274..103251292,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50484 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17296 | |||
|TSSclassifier=strong | |||
|UniProt=Q7LG56 | |||
|association_with_transcript=53bp_to_ENST00000251810,NM_001172478,NM_015713,uc003ykn.2,uc010mbv.1,uc010mbw.1,uc010mbx.1,uc010mby.1_5end | |||
|description=CAGE_peak_3_at_RRM2B_5end | |||
|id=chr8:103251274..103251292,- | |||
|ontology_enrichment_celltype=CL:0002057!5.04e-14!42;CL:0000766!3.63e-13!76;CL:0000860!3.00e-11!45;CL:0000557!3.10e-11!71;CL:0002009!5.17e-11!65;CL:0002194!6.08e-11!63;CL:0000576!6.08e-11!63;CL:0000040!6.08e-11!63;CL:0000559!6.08e-11!63;CL:0000839!6.93e-11!70;CL:0000763!9.01e-07!112;CL:0000049!9.01e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-12;33!CL:0002057;1.37e-12;33!CL:0000576;1.03e-10;48!CL:0000473;3.86e-10;39!CL:0000234;3.86e-10;39!CL:0000766;1.15e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.92e-16,72;CL:0000860,5.71e-15,42;CL:0002057,5.71e-15,42;CL:0000557,2.07e-14,67;CL:0000473,2.13e-14,48;CL:0000234,2.13e-14,48;CL:0002009,2.69e-14,61;CL:0002194,2.87e-14,59;CL:0000576,2.87e-14,59;CL:0000040,2.87e-14,59;CL:0000559,2.87e-14,59;CL:0000839,7.52e-14,66;CL:0000763,3.21e-08,108;CL:0000049,3.21e-08,108;CL:0000738,7.98e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-25!115;UBERON:0001049!3.97e-18!57;UBERON:0005068!3.97e-18!57;UBERON:0006241!3.97e-18!57;UBERON:0007135!3.97e-18!57;UBERON:0003080!2.13e-15!42;UBERON:0001017!2.48e-15!82;UBERON:0002616!3.67e-15!59;UBERON:0002780!3.73e-15!41;UBERON:0001890!3.73e-15!41;UBERON:0006240!3.73e-15!41;UBERON:0005743!4.84e-15!86;UBERON:0000073!1.71e-14!94;UBERON:0001016!1.71e-14!94;UBERON:0000955!2.07e-13!69;UBERON:0006238!2.07e-13!69;UBERON:0001893!8.57e-13!34;UBERON:0002020!1.04e-12!34;UBERON:0003528!1.04e-12!34;UBERON:0002791!3.46e-12!33;UBERON:0001869!6.43e-12!32;UBERON:0002390!1.37e-11!102;UBERON:0003061!1.37e-11!102;UBERON:0003075!1.15e-10!86;UBERON:0007284!1.15e-10!86;UBERON:0002193!1.35e-10!112;UBERON:0002346!3.59e-10!90;UBERON:0002619!1.39e-09!22;UBERON:0002371!1.51e-09!80;UBERON:0004765!5.46e-09!101;UBERON:0001434!5.46e-09!101;UBERON:0001950!8.68e-09!20;UBERON:0004121!9.07e-09!169;UBERON:0001474!1.18e-08!86;UBERON:0000924!1.51e-08!173;UBERON:0006601!1.51e-08!173;UBERON:0000153!1.89e-08!129;UBERON:0007811!1.89e-08!129;UBERON:0000956!2.75e-08!25;UBERON:0000203!2.75e-08!25;UBERON:0000033!5.69e-08!123;UBERON:0003056!1.24e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.40e-11;34!UBERON:0003528;1.42e-11;34!UBERON:0002020;1.42e-11;34!UBERON:0002780;2.08e-11;41!UBERON:0001890;2.08e-11;41!UBERON:0001869;3.36e-11;32!UBERON:0002791;5.09e-11;32!UBERON:0000073;2.93e-10;53!UBERON:0002616;2.93e-10;53!UBERON:0002619;4.32e-10;22!UBERON:0001950;2.58e-09;20!UBERON:0000956;1.25e-08;25!UBERON:0000203;1.25e-08;25!UBERON:0001017;9.84e-08;75!UBERON:0007023;2.85e-07;114!UBERON:0000955;2.98e-07;68!UBERON:0001016;7.32e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.36e-26,114;UBERON:0001049,1.77e-18,56;UBERON:0005068,1.77e-18,56;UBERON:0006241,1.77e-18,56;UBERON:0007135,1.77e-18,56;UBERON:0000073,4.79e-17,53;UBERON:0002616,4.79e-17,53;UBERON:0002780,1.46e-15,41;UBERON:0001890,1.46e-15,41;UBERON:0003080,1.46e-15,41;UBERON:0006240,1.46e-15,41;UBERON:0001017,3.95e-15,81;UBERON:0001016,3.00e-14,89;UBERON:0002390,6.29e-14,98;UBERON:0003061,6.29e-14,98;UBERON:0001893,3.65e-13,34;UBERON:0003528,4.49e-13,34;UBERON:0002020,4.49e-13,34;UBERON:0000955,6.49e-13,68;UBERON:0006238,6.49e-13,68;UBERON:0002193,1.84e-12,108;UBERON:0001869,3.03e-12,32;UBERON:0002791,6.00e-12,32;UBERON:0002371,7.92e-12,76;UBERON:0003075,3.41e-11,82;UBERON:0007284,3.41e-11,82;UBERON:0001474,1.03e-10,82;UBERON:0002346,1.17e-10,86;UBERON:0002405,3.87e-10,93;UBERON:0002619,5.14e-10,22;UBERON:0001434,1.63e-09,100;UBERON:0001950,3.54e-09,20;UBERON:0010371,8.29e-09,104;UBERON:0004121,1.70e-08,171;UBERON:0000924,1.70e-08,171;UBERON:0006601,1.70e-08,171;UBERON:0000956,1.93e-08,25;UBERON:0000203,1.93e-08,25;UBERON:0004765,1.94e-08,90;UBERON:0003056,2.78e-08,61 | |||
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| |||
|short_description=p3@RRM2B | |||
}} |
Revision as of 23:11, 22 January 2014
Short description: | p3@RRM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RRM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000251810, NM_001172478, NM_015713, uc003ykn.2, uc010mbv.1, uc010mbw.1, uc010mbx.1, uc010mby.1_5end |
EntrezGene: | RRM2B |
HGNC: | 17296 |
UniProt: | Q7LG56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.92e-16 | 72 |
classical monocyte | 5.71e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.71e-15 | 42 |
granulocyte monocyte progenitor cell | 2.07e-14 | 67 |
defensive cell | 2.13e-14 | 48 |
phagocyte | 2.13e-14 | 48 |
macrophage dendritic cell progenitor | 2.69e-14 | 61 |
monopoietic cell | 2.87e-14 | 59 |
monocyte | 2.87e-14 | 59 |
monoblast | 2.87e-14 | 59 |
promonocyte | 2.87e-14 | 59 |
myeloid lineage restricted progenitor cell | 7.52e-14 | 66 |
myeloid cell | 3.21e-08 | 108 |
common myeloid progenitor | 3.21e-08 | 108 |
leukocyte | 7.98e-08 | 136 |