FFCP PHASE1:Hg19::chr11:35099917..35099936,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:35099917..35099936,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:35099917..35099936,+ | |||
|id=chr11:35099917..35099936,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.42e-58!140;CL:0002057!8.60e-57!42;CL:0000860!2.28e-52!45;CL:0002087!1.00e-48!119;CL:0000037!9.68e-48!172;CL:0000566!9.68e-48!172;CL:0002031!3.27e-46!124;CL:0000988!2.92e-44!182;CL:0000766!4.70e-42!76;CL:0002032!3.39e-41!165;CL:0000837!3.39e-41!165;CL:0002009!3.35e-40!65;CL:0000557!3.29e-38!71;CL:0002194!2.61e-36!63;CL:0000576!2.61e-36!63;CL:0000040!2.61e-36!63;CL:0000559!2.61e-36!63;CL:0000839!7.20e-34!70;CL:0000763!3.13e-30!112;CL:0000049!3.13e-30!112;CL:0000134!2.15e-16!358;CL:0000624!8.02e-16!6;CL:0002320!8.92e-16!365;CL:0000219!1.32e-13!390;CL:0000034!1.78e-11!444;CL:0000048!5.06e-11!430;CL:0000723!1.17e-10!436;CL:0000791!2.45e-10!18;CL:0000789!2.45e-10!18;CL:0002420!2.45e-10!18;CL:0002419!2.45e-10!18;CL:0000790!2.45e-10!18;CL:0000838!3.86e-10!52;CL:0000542!7.17e-10!53;CL:0000051!7.17e-10!53;CL:0000767!3.30e-09!3;CL:0000898!5.49e-09!3;CL:0000623!8.40e-09!3;CL:0000825!8.40e-09!3;CL:0000842!1.01e-08!3;CL:0000094!2.74e-08!8;CL:0002393!2.17e-07!9;CL:0002397!2.17e-07!9;CL:0000084!6.01e-07!25;CL:0000827!6.01e-07!25;CL:0001014!7.88e-07!2;CL:0001016!7.88e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-28;33!CL:0002057;1.03e-28;33!CL:0000473;4.90e-20;39!CL:0000234;4.90e-20;39!CL:0000624;4.24e-18;6!CL:0000576;6.14e-17;48!CL:0002087;7.67e-16;104!CL:0000767;4.30e-14;3!CL:0000791;4.84e-14;18!CL:0000789;4.84e-14;18!CL:0002419;4.84e-14;18!CL:0000766;5.89e-14;69!CL:0000898;6.41e-14;3!CL:0000623;2.18e-13;3!CL:0000738;1.25e-10;136!CL:0001014;2.66e-10;2!CL:0001016;2.66e-10;2!CL:0000815;7.51e-10;2!CL:0000792;7.51e-10;2!CL:0002677;7.51e-10;2!CL:0000084;9.19e-10;25!CL:0000094;5.42e-09;8!CL:0002393;1.06e-07;6!CL:0002397;1.06e-07;6!CL:0000542;2.38e-07;53!CL:0000763;3.91e-07;100!CL:0000226;7.82e-07;3!CL:0000842;7.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.02e-44,136;CL:0002087,7.95e-37,115;CL:0002031,4.02e-35,120;CL:0000860,7.34e-35,42;CL:0002057,7.34e-35,42;CL:0000037,4.71e-34,168;CL:0000988,6.54e-32,177;CL:0002032,9.12e-32,161;CL:0000837,9.12e-32,161;CL:0000473,6.41e-30,48;CL:0000234,6.41e-30,48;CL:0002009,1.46e-27,61;CL:0000766,1.84e-27,72;CL:0000557,1.12e-24,67;CL:0002194,5.23e-23,59;CL:0000576,5.23e-23,59;CL:0000040,5.23e-23,59;CL:0000559,5.23e-23,59;CL:0000763,3.72e-20,108;CL:0000049,3.72e-20,108;CL:0000839,4.01e-20,66;CL:0000624,5.47e-18,6;CL:0000767,3.15e-14,3;CL:0000791,6.62e-14,18;CL:0000789,6.62e-14,18;CL:0002420,6.62e-14,18;CL:0002419,6.62e-14,18;CL:0000790,6.62e-14,18;CL:0000898,7.33e-14,3;CL:0000623,1.48e-13,3;CL:0000825,1.48e-13,3;CL:0000134,8.52e-12,354;CL:0002320,2.10e-11,361;CL:0000838,4.56e-11,52;CL:0000542,8.28e-11,53;CL:0000051,8.28e-11,53;CL:0001014,2.66e-10,2;CL:0001016,2.66e-10,2;CL:0000219,5.07e-10,386;CL:0000815,7.52e-10,2;CL:0000792,7.52e-10,2;CL:0002677,7.52e-10,2;CL:0000084,1.14e-09,25;CL:0000827,1.14e-09,25;CL:0000094,4.78e-09,8;CL:0000034,1.71e-08,441;CL:0000048,2.48e-08,427;CL:0000723,4.24e-08,433;CL:0000226,8.30e-07,3;CL:0000842,8.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.26e-24;42!CL:0000790;4.84e-14;18!CL:0000051;2.38e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.38e-35!80;UBERON:0002390!3.88e-34!102;UBERON:0003061!3.88e-34!102;UBERON:0001474!9.99e-32!86;UBERON:0002193!4.42e-30!112;UBERON:0004765!1.58e-25!101;UBERON:0001434!1.58e-25!101;UBERON:0002405!4.36e-24!115;UBERON:0002384!6.19e-15!375;UBERON:0003081!7.44e-12!216;UBERON:0002204!1.25e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-21,76;UBERON:0002390,9.15e-21,98;UBERON:0003061,9.15e-21,98;UBERON:0001474,2.71e-19,82;UBERON:0002193,2.48e-18,108;UBERON:0002405,3.01e-18,93;UBERON:0004765,3.74e-17,90;UBERON:0001434,5.86e-15,100;UBERON:0002384,7.21e-11,371;UBERON:0003081,3.14e-07,203;UBERON:0002204,4.38e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,2.75354993794233,2.68680578668049,4.95411594611443,0,0,0,0,0,0.293600439334847,12.1878989877013,8.22232234627581,9.98250005292918,0,0,0,0.145398238779565,0,0.242584061187816,1.16214518452842,0.411167888021826,1.54853185447552,0.863077176966451,0.512321413058201,1.89185783910868,10.6871161028352,8.39130088658974,13.5426486594342,0.752969358170419,0,0.674170453335254,10.1007684482398,4.49300637906531,14.7047538933779,0,0,0,6.09439401120026,3.97169657283798,8.09668923694247,1.25624332628372,0.521482918420201,0.65156653411535,3.02699751316684,4.41933163185078,7.27863491114034,0,0.212604299965044,0.628975936525128,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,2.84606484554724,0.587237189370939,1.14681968437569,0,1.12101712596307,0.263384084775077,0.786839080455332,2.75107533924415,1.02800749499755,0.167186495390678,2.60737813306872,0.473447805734733,0,0,2.3568472597987,0.221533894583621,2.16643091012012,0.25618263945135,0,0,0,0.289803085735052,1.63115219478266,1.60524496853828,0,0,2.29932296161153,1.71813722741315,1.51811815211702,0,0,0,0,0,0,0,0,1.00803371612366,1.60464117470104,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.94064817373566,1.66845947163673,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.37285620900479,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39937339723601,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:35099917..35099936,+ | |||
}} |
Latest revision as of 21:48, 23 July 2015
Short description: | p@chr11:35099917..35099936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35099917..35099936, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-21 | 76 |
hematopoietic system | 9.15e-21 | 98 |
blood island | 9.15e-21 | 98 |
bone element | 2.71e-19 | 82 |
hemolymphoid system | 2.48e-18 | 108 |
immune system | 3.01e-18 | 93 |
skeletal element | 3.74e-17 | 90 |
skeletal system | 5.86e-15 | 100 |
connective tissue | 7.21e-11 | 371 |
lateral plate mesoderm | 3.14e-07 | 203 |
musculoskeletal system | 4.38e-07 | 167 |