FFCP PHASE1:Hg19::chr13:31501193..31501196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:31501193..31501196,+ | |||
|description=CAGE_peak_at_chr13:31501193..31501196,+ | |description=CAGE_peak_at_chr13:31501193..31501196,+ | ||
|id=chr13:31501193..31501196,+ | |id=chr13:31501193..31501196,+ | ||
|ontology_enrichment_celltype=CL:0000359!5.10e-15!32;CL:0000192!8.89e-12!42;CL:0000514!8.89e-12!42;CL:0002539!1.35e-11!10;CL:0000187!1.09e-10!54;CL:0000680!1.27e-10!57;CL:0000056!1.27e-10!57;CL:0000355!1.27e-10!57;CL:0000393!1.47e-10!60;CL:0000211!1.47e-10!60;CL:0000183!4.11e-09!59;CL:0000055!6.76e-09!180 | |ontology_enrichment_celltype=CL:0000359!5.10e-15!32;CL:0000192!8.89e-12!42;CL:0000514!8.89e-12!42;CL:0002539!1.35e-11!10;CL:0000187!1.09e-10!54;CL:0000680!1.27e-10!57;CL:0000056!1.27e-10!57;CL:0000355!1.27e-10!57;CL:0000393!1.47e-10!60;CL:0000211!1.47e-10!60;CL:0000183!4.11e-09!59;CL:0000055!6.76e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0002539;1.87e-27;10!CL:0000359;6.14e-27;32!CL:0000192;2.75e-15;43!CL:0000327;5.31e-14;15!CL:0000153;1.22e-12;9!CL:0000447;1.22e-12;9!CL:0000569;9.68e-11;4!CL:0000499;4.54e-09;28!CL:0002595;1.51e-08;5!CL:0000187;1.92e-07;55!CL:0000138;2.28e-07;6!CL:0000214;3.34e-07;3!CL:0000632;7.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.48e-28,32;CL:0002539,6.33e-28,10;CL:0000192,5.30e-20,43;CL:0000514,5.30e-20,43;CL:0000187,6.88e-15,55;CL:0000327,5.51e-14,15;CL:0000680,6.07e-14,58;CL:0000056,6.07e-14,58;CL:0000355,6.07e-14,58;CL:0000393,4.31e-13,61;CL:0000211,4.31e-13,61;CL:0000153,1.58e-12,9;CL:0000447,1.58e-12,9;CL:0000569,7.09e-11,4;CL:0000011,7.09e-11,4;CL:0000499,4.55e-09,28;CL:0002595,8.73e-09,5;CL:0000222,7.40e-08,121;CL:0000214,2.92e-07,3;CL:0000058,3.16e-07,6;CL:0000138,3.16e-07,6;CL:0000632,5.66e-07,3;CL:0002494,9.46e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.75e-15;43!CL:0000011;9.68e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;5.32e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,5.18e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004573!3.12e-19!33;UBERON:0004571!3.12e-19!33;UBERON:0001637!8.68e-15!42;UBERON:0003509!8.68e-15!42;UBERON:0004572!8.68e-15!42;UBERON:0000947!3.89e-12!21;UBERON:0010191!3.89e-12!21;UBERON:0001981!4.36e-12!60;UBERON:0007500!4.36e-12!60;UBERON:0004537!4.36e-12!60;UBERON:0006965!4.36e-12!60;UBERON:0000055!7.80e-12!69;UBERON:0002049!1.25e-11!79;UBERON:0007798!1.25e-11!79;UBERON:0004237!1.35e-11!10;UBERON:0004695!1.35e-11!10;UBERON:0002111!1.35e-11!10;UBERON:0004178!1.35e-11!10;UBERON:0004872!2.17e-11!84;UBERON:0001135!2.52e-11!15;UBERON:0001009!9.07e-11!113;UBERON:0004535!1.29e-10!110;UBERON:0002385!1.68e-10!63;UBERON:0001015!1.68e-10!63;UBERON:0000383!1.68e-10!63;UBERON:0001134!2.82e-10!61;UBERON:0002036!2.82e-10!61;UBERON:0003082!2.82e-10!61;UBERON:0003914!6.11e-09!118;UBERON:0004290!1.51e-08!70;UBERON:0000914!2.29e-08!83;UBERON:0002329!2.29e-08!83;UBERON:0003077!2.29e-08!83;UBERON:0003059!2.29e-08!83;UBERON:0007282!2.29e-08!83;UBERON:0009618!2.29e-08!83;UBERON:0007285!2.29e-08!83;UBERON:0000486!1.19e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.74e-29;33!UBERON:0004571;9.74e-29;33!UBERON:0004237;1.87e-27;10!UBERON:0004695;1.87e-27;10!UBERON:0002111;1.87e-27;10!UBERON:0004178;1.87e-27;10!UBERON:0000947;2.29e-19;21!UBERON:0010191;2.29e-19;21!UBERON:0001637;2.38e-18;42!UBERON:0003509;2.38e-18;42!UBERON:0004572;2.38e-18;42!UBERON:0001135;7.11e-18;15!UBERON:0004457;3.96e-17;9!UBERON:0000042;3.96e-17;9!UBERON:0003688;1.32e-11;6!UBERON:0002358;1.32e-11;6!UBERON:0003684;1.32e-11;6!UBERON:0001178;1.32e-11;6!UBERON:0002133;3.91e-10;2!UBERON:0007500;1.36e-09;56!UBERON:0001981;1.36e-09;56!UBERON:0004537;1.36e-09;56!UBERON:0000948;5.30e-09;22!UBERON:0003834;1.51e-08;5!UBERON:0001533;1.51e-08;5!UBERON:0002385;6.40e-08;31!UBERON:0001015;6.40e-08;31!UBERON:0000383;6.40e-08;31!UBERON:0007100;8.30e-08;25!UBERON:0006915;3.34e-07;3!UBERON:0007616;3.34e-07;3!UBERON:0002217;3.34e-07;3!UBERON:0002018;3.34e-07;3!UBERON:0003978;5.09e-07;3!UBERON:0000946;5.09e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,4.23e-31,33;UBERON:0004571,4.23e-31,33;UBERON:0004237,6.33e-28,10;UBERON:0004695,6.33e-28,10;UBERON:0002111,6.33e-28,10;UBERON:0004178,6.33e-28,10;UBERON:0001637,9.77e-27,42;UBERON:0003509,9.77e-27,42;UBERON:0004572,9.77e-27,42;UBERON:0007500,8.60e-23,59;UBERON:0001981,8.60e-23,59;UBERON:0004537,8.60e-23,59;UBERON:0006965,8.60e-23,59;UBERON:0003914,2.42e-21,117;UBERON:0004872,8.01e-21,83;UBERON:0000947,1.39e-19,21;UBERON:0010191,1.39e-19,21;UBERON:0000055,3.56e-19,68;UBERON:0001135,3.52e-18,15;UBERON:0002049,3.84e-16,78;UBERON:0007798,3.84e-16,78;UBERON:0004535,1.30e-14,109;UBERON:0001009,4.40e-14,112;UBERON:0001134,7.94e-13,62;UBERON:0002036,7.94e-13,62;UBERON:0003082,7.94e-13,62;UBERON:0000025,1.13e-12,192;UBERON:0004457,1.77e-12,12;UBERON:0000042,1.77e-12,12;UBERON:0002385,2.54e-12,64;UBERON:0001015,2.54e-12,64;UBERON:0000383,2.54e-12,64;UBERON:0000486,1.05e-11,83;UBERON:0003688,2.92e-11,6;UBERON:0002358,2.92e-11,6;UBERON:0003684,2.92e-11,6;UBERON:0001178,2.92e-11,6;UBERON:0002329,8.86e-11,71;UBERON:0003059,8.86e-11,71;UBERON:0007282,8.86e-11,71;UBERON:0004290,8.86e-11,71;UBERON:0009618,8.86e-11,71;UBERON:0003077,1.39e-10,72;UBERON:0007285,1.39e-10,72;UBERON:0000948,1.45e-10,24;UBERON:0005498,1.45e-10,24;UBERON:0004140,1.45e-10,24;UBERON:0009881,1.45e-10,24;UBERON:0004141,1.45e-10,24;UBERON:0003084,1.45e-10,24;UBERON:0007005,1.45e-10,24;UBERON:0004139,1.45e-10,24;UBERON:0004291,1.45e-10,24;UBERON:0007524,2.15e-10,73;UBERON:0002133,5.50e-10,2;UBERON:0005256,7.90e-10,122;UBERON:0007503,1.62e-09,78;UBERON:0007100,3.00e-09,27;UBERON:0004111,7.41e-09,240;UBERON:0003834,8.73e-09,5;UBERON:0001533,8.73e-09,5;UBERON:0003104,2.90e-08,160;UBERON:0009142,2.90e-08,160;UBERON:0003498,3.03e-08,5;UBERON:0005985,3.03e-08,5;UBERON:0000490,2.46e-07,148;UBERON:0006915,2.92e-07,3;UBERON:0007616,2.92e-07,3;UBERON:0002217,2.92e-07,3;UBERON:0002018,2.92e-07,3;UBERON:0002100,3.98e-07,199;UBERON:0000483,5.65e-07,306;UBERON:0004145,6.01e-07,3;UBERON:0003978,6.37e-07,3;UBERON:0009751,6.37e-07,3;UBERON:0000946,6.37e-07,3;UBERON:0002523,6.37e-07,3;UBERON:0005983,6.37e-07,3;UBERON:0002165,6.37e-07,3;UBERON:0002062,6.37e-07,3;UBERON:0007280,6.37e-07,3;UBERON:0000119,7.65e-07,309 | |||
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| ||
|short_description=p@chr13:31501193..31501196,+ | |short_description=p@chr13:31501193..31501196,+ | ||
}} | }} |
Latest revision as of 15:35, 24 July 2015
Short description: | p@chr13:31501193..31501196, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31501193..31501196, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.48e-28 | 32 |
aortic smooth muscle cell | 6.33e-28 | 10 |
smooth muscle cell | 5.30e-20 | 43 |
smooth muscle myoblast | 5.30e-20 | 43 |
muscle cell | 6.88e-15 | 55 |
extracellular matrix secreting cell | 5.51e-14 | 15 |
muscle precursor cell | 6.07e-14 | 58 |
myoblast | 6.07e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.07e-14 | 58 |
electrically responsive cell | 4.31e-13 | 61 |
electrically active cell | 4.31e-13 | 61 |
GAG secreting cell | 1.58e-12 | 9 |
carbohydrate secreting cell | 1.58e-12 | 9 |
cardiac mesenchymal cell | 7.09e-11 | 4 |
migratory trunk neural crest cell | 7.09e-11 | 4 |
stromal cell | 4.55e-09 | 28 |
smooth muscle cell of the subclavian artery | 8.73e-09 | 5 |
mesodermal cell | 7.40e-08 | 121 |
synovial cell | 2.92e-07 | 3 |
chondroblast | 3.16e-07 | 6 |
chondrocyte | 3.16e-07 | 6 |
hepatic stellate cell | 5.66e-07 | 3 |
cardiocyte | 9.46e-07 | 16 |
Ontology term | p-value | n |
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