FFCP PHASE1:Hg19::chr14:50787264..50787300,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:50787264..50787300,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr14:50787264..50787300,+ | |||
|id=chr14:50787264..50787300,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-20;33!CL:0002057;1.22e-20;33!CL:0000473;5.05e-16;39!CL:0000234;5.05e-16;39!CL:0000766;8.12e-08;69!CL:0000576;1.29e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.02e-17,42;CL:0002057,3.02e-17,42;CL:0000473,3.83e-15,48;CL:0000234,3.83e-15,48;CL:0002194,3.45e-12,59;CL:0000576,3.45e-12,59;CL:0000040,3.45e-12,59;CL:0000559,3.45e-12,59;CL:0002009,8.32e-12,61;CL:0000839,5.98e-11,66;CL:0000557,8.57e-11,67;CL:0000766,4.48e-10,72;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.64e-29;1!UBERON:0003056;1.14e-10;3!CL:0002057;1.95e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.62e-07!41;UBERON:0001890!3.62e-07!41;UBERON:0006240!3.62e-07!41;UBERON:0003080!6.27e-07!42;UBERON:0001049!6.82e-07!57;UBERON:0005068!6.82e-07!57;UBERON:0006241!6.82e-07!57;UBERON:0007135!6.82e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.64e-29;1!UBERON:0001785;3.64e-29;1!UBERON:0002464;3.64e-29;1!UBERON:0004904;3.64e-29;1!UBERON:0001021;3.64e-29;1!UBERON:0001905;2.55e-15;2!UBERON:0003714;2.55e-15;2!UBERON:0005162;2.55e-15;2!UBERON:0000122;2.55e-15;2!UBERON:0002757;2.55e-15;2!UBERON:0010134;2.55e-15;2!UBERON:0005408;2.55e-15;2!UBERON:0001899;2.55e-15;2!UBERON:0003296;2.52e-08;4!UBERON:0010133;2.52e-08;4!UBERON:0002784;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0002371,1.44e-09,76;UBERON:0001474,6.78e-09,82;UBERON:0001781,2.43e-08,4;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4;UBERON:0004765,3.90e-08,90;UBERON:0002405,6.96e-08,93;UBERON:0002390,1.70e-07,98;UBERON:0003061,1.70e-07,98;UBERON:0001434,2.36e-07,100;UBERON:0002193,7.91e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0.236482229888585,2.06847408441971,2.5819387343353,0,0,0,0,8.57034898638527,5.45579346029359,3.83602275479425,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0.10893846351899,0.139423744278603,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0.504143392443436,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0.548257766857182,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:50787264..50787300,+ | |||
}} |
Latest revision as of 20:54, 24 July 2015
Short description: | p@chr14:50787264..50787300, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:50787264..50787300, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.02e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-17 | 42 |
defensive cell | 3.83e-15 | 48 |
phagocyte | 3.83e-15 | 48 |
monopoietic cell | 3.45e-12 | 59 |
monocyte | 3.45e-12 | 59 |
monoblast | 3.45e-12 | 59 |
promonocyte | 3.45e-12 | 59 |
macrophage dendritic cell progenitor | 8.32e-12 | 61 |
myeloid lineage restricted progenitor cell | 5.98e-11 | 66 |
granulocyte monocyte progenitor cell | 8.57e-11 | 67 |
myeloid leukocyte | 4.48e-10 | 72 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
neural tissue | 2.37e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
bone marrow | 1.44e-09 | 76 |
bone element | 6.78e-09 | 82 |
layer of retina | 2.43e-08 | 4 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |
skeletal element | 3.90e-08 | 90 |
immune system | 6.96e-08 | 93 |
hematopoietic system | 1.70e-07 | 98 |
blood island | 1.70e-07 | 98 |
skeletal system | 2.36e-07 | 100 |
hemolymphoid system | 7.91e-07 | 108 |