FFCP PHASE1:Hg19::chr14:65232928..65232952,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:65232928..65232952,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr14:65232928..65232952,- | |description=CAGE_peak_at_chr14:65232928..65232952,- | ||
|id=chr14:65232928..65232952,- | |id=chr14:65232928..65232952,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.36e-09;2!CL:0000558;4.36e-09;2!CL:0000097;2.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.31e-09,2;CL:0000765,4.31e-09,2;CL:0000050,4.31e-09,2;CL:0000038,4.31e-09,2;CL:0000558,4.31e-09,2;CL:0000547,4.31e-09,2;CL:0000549,4.31e-09,2;CL:0000550,4.31e-09,2;CL:0000552,4.31e-09,2;CL:0000097,2.47e-07,5;CL:0002028,2.47e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.44e-12;3!UBERON:0005062;1.21e-08;4!UBERON:0007284;1.21e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;6.17e-11;8!DOID:3910;2.11e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.69e-11,8;DOID:3910,2.70e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-39!115;UBERON:0001049!1.32e-24!57;UBERON:0005068!1.32e-24!57;UBERON:0006241!1.32e-24!57;UBERON:0007135!1.32e-24!57;UBERON:0000955!4.74e-22!69;UBERON:0006238!4.74e-22!69;UBERON:0001017!9.22e-22!82;UBERON:0002346!1.13e-21!90;UBERON:0005743!3.41e-21!86;UBERON:0000073!1.41e-20!94;UBERON:0001016!1.41e-20!94;UBERON:0002616!1.53e-20!59;UBERON:0003075!3.57e-20!86;UBERON:0007284!3.57e-20!86;UBERON:0002780!2.08e-17!41;UBERON:0001890!2.08e-17!41;UBERON:0006240!2.08e-17!41;UBERON:0003080!8.78e-17!42;UBERON:0002020!7.28e-16!34;UBERON:0003528!7.28e-16!34;UBERON:0001893!1.72e-15!34;UBERON:0002791!1.27e-14!33;UBERON:0001869!4.71e-14!32;UBERON:0002619!2.30e-13!22;UBERON:0001950!3.71e-13!20;UBERON:0000153!4.16e-12!129;UBERON:0007811!4.16e-12!129;UBERON:0000924!8.51e-12!173;UBERON:0006601!8.51e-12!173;UBERON:0000956!3.43e-11!25;UBERON:0000203!3.43e-11!25;UBERON:0004121!9.56e-11!169;UBERON:0003056!1.10e-10!61;UBERON:0000033!1.30e-10!123;UBERON:0003076!3.70e-09!15;UBERON:0003057!3.70e-09!15;UBERON:0004733!2.70e-08!12;UBERON:0002028!2.70e-08!12;UBERON:0007277!2.70e-08!12;UBERON:0002298!1.72e-07!8;UBERON:0004732!1.79e-07!13;UBERON:0001871!2.16e-07!7;UBERON:0000025!6.66e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.21e-11;3!UBERON:0000946;2.21e-11;3!UBERON:0004733;2.86e-10;12!UBERON:0002028;2.86e-10;12!UBERON:0002680;6.38e-10;9!UBERON:0001895;6.38e-10;9!UBERON:0004732;1.99e-09;13!UBERON:0005090;7.58e-09;2!UBERON:0001630;7.58e-09;2!UBERON:0003296;9.66e-09;4!UBERON:0010133;9.66e-09;4!UBERON:0000007;2.11e-08;2!UBERON:0004903;2.11e-08;2!UBERON:0002173;2.11e-08;2!UBERON:0002186;2.11e-08;2!UBERON:0002133;2.88e-08;2!UBERON:0000073;6.13e-08;53!UBERON:0002616;6.13e-08;53!UBERON:0002148;6.58e-08;2!UBERON:0006331;6.58e-08;2!UBERON:0009662;6.58e-08;2!UBERON:0007023;2.22e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.87e-24,114;UBERON:0003978,1.10e-11,3;UBERON:0009751,1.10e-11,3;UBERON:0000946,1.10e-11,3;UBERON:0002523,1.10e-11,3;UBERON:0005983,1.10e-11,3;UBERON:0002165,1.10e-11,3;UBERON:0002062,1.10e-11,3;UBERON:0007280,1.10e-11,3;UBERON:0000073,2.90e-11,53;UBERON:0002616,2.90e-11,53;UBERON:0001049,1.71e-10,56;UBERON:0005068,1.71e-10,56;UBERON:0006241,1.71e-10,56;UBERON:0007135,1.71e-10,56;UBERON:0004733,3.19e-10,12;UBERON:0002028,3.19e-10,12;UBERON:0007277,3.19e-10,12;UBERON:0002680,6.13e-10,9;UBERON:0001895,6.13e-10,9;UBERON:0010092,6.13e-10,9;UBERON:0003075,1.54e-09,82;UBERON:0007284,1.54e-09,82;UBERON:0004732,2.20e-09,13;UBERON:0002346,6.50e-09,86;UBERON:0005090,8.23e-09,2;UBERON:0001630,8.23e-09,2;UBERON:0003296,1.05e-08,4;UBERON:0010133,1.05e-08,4;UBERON:0000007,1.29e-08,2;UBERON:0002133,1.87e-08,2;UBERON:0004903,2.70e-08,2;UBERON:0002173,2.70e-08,2;UBERON:0002186,2.70e-08,2;UBERON:0003076,4.82e-08,15;UBERON:0003057,4.82e-08,15;UBERON:0000955,6.21e-08,68;UBERON:0006238,6.21e-08,68;UBERON:0002148,7.62e-08,2;UBERON:0006331,7.62e-08,2;UBERON:0009662,7.62e-08,2;UBERON:0010371,1.13e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,3.94130590316755,4.31437326664808,0.621984346622316,0,1.51490920111656,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,42.0978963160194,11.7645952961205,0,0,0,0,2.28923662045859,0.742585499285292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,1.52927441428475,1.13929437434833,0.238231775457789,0.822724546172388,1.29694662238543,1.62009431171434,0,0,0,0,0,0.144269212976445,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,3.34087408674291,8.61611792633986,1.6227340708559,0,0,0,0,0,0,4.54617834890261,0,0,0,2.98244294329889,0.984685914873589,0,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,1.27126825146383,0,0,0.291604613383254,1.04174996959975,0,0.844175070377856,1.52581736317083,8.40402375477307,2.95547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,1.80476528493745,1.9606253431774,1.84603745673427,3.98482838720789,1.90723894776454,0,0,0,0.432777279484182,0,0,0,0,0,0,0.269604531922708,2.40773294189637,0,0,0.19566461893209,0,0,0,0.91821828489147,0.126373159256976,0.150323419414493,0.72581733978073,0.664653872707185,0,0,1.19472429772959,0,0.277349346026277,0,0,0,1.04836000945218,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.189932387867636,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,1.09524303113594,0,0,0,1.67569440763353,1.60412296808179,2.87149209830726,0,1.28767814440971,0,1.00775208730089,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.419636705079985,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0.574647645245373,0,0,0,2.65013777824443,1.55139547633861,1.19009341568421,0,0,0,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.876336514945499,0.573409195690071,1.22021956690538,0.745156835296601,0.138348634936231,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.127894371303652,0,0,0.436838552768056,0.169732529954025,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0.256916900385838,0,2.55414174491442,0.41023272848151,0,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0.818859587550484,0,0.742913430802341,0.781078098613847,1.44680757550829,0.317079050969534,0.546974809018219,0,1.48863353516788,0,0.255524855279191,0,1.00885116665647,1.82089681270989,4.55324382702595,0.620916591138472,0,0,0.951576261675644,0.328863867814245,0.118193840883968,0.111231401892069,0,0.471346769748006,0,0,0,0,0.500335809236594,0.316027223465453,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0.098150233615243,0,11.6537190693821,2.36124455769368,0,1.94284397223656,0.233939463462106,0.397901550322736,0,0.11294608203896,0.109940516745429,1.50962843566674,0,0,0.470317296361523,0,0,0,0.297046400327086,0.8453114551668,0,0,0.515663103788617,0,0,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0,0.203974470572744,1.30905207102113,0,0,0,0,0,0.327796715891087,0.126698501011437,0.203977659483963,1.87052183685892,0.0918948995348449,1.0028301571695,0,0.803892390468535,0,0.620597975171371,1.91910583710883,0.714193294391221,0,0.0620747142958579,0.33639558774184,0.12729431655633,0.202117188958219,1.52401723527873,0.684466602170562,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,3.94130590316755,4.31437326664808,0.621984346622316,0,1.51490920111656,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,42.0978963160194,11.7645952961205,0,0,0,0,2.28923662045859,0.742585499285292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,1.52927441428475,1.13929437434833,0.238231775457789,0.822724546172388,1.29694662238543,1.62009431171434,0,0,0,0,0,0.144269212976445,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,3.34087408674291,8.61611792633986,1.6227340708559,0,0,0,0,0,0,4.54617834890261,0,0,0,2.98244294329889,0.984685914873589,0,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,1.27126825146383,0,0,0.291604613383254,1.04174996959975,0,0.844175070377856,1.52581736317083,8.40402375477307,2.95547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,1.80476528493745,1.9606253431774,1.84603745673427,3.98482838720789,1.90723894776454,0,0,0,0.432777279484182,0,0,0,0,0,0,0.269604531922708,2.40773294189637,0,0,0.19566461893209,0,0,0,0.91821828489147,0.126373159256976,0.150323419414493,0.72581733978073,0.664653872707185,0,0,1.19472429772959,0,0.277349346026277,0,0,0,1.04836000945218,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.189932387867636,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,1.09524303113594,0,0,0,1.67569440763353,1.60412296808179,2.87149209830726,0,1.28767814440971,0,1.00775208730089,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.419636705079985,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0.574647645245373,0,0,0,2.65013777824443,1.55139547633861,1.19009341568421,0,0,0,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.876336514945499,0.573409195690071,1.22021956690538,0.745156835296601,0.138348634936231,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.127894371303652,0,0,0.436838552768056,0.169732529954025,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0.256916900385838,0,2.55414174491442,0.41023272848151,0,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0.818859587550484,0,0.742913430802341,0.781078098613847,1.44680757550829,0.317079050969534,0.546974809018219,0,1.48863353516788,0,0.255524855279191,0,1.00885116665647,1.82089681270989,4.55324382702595,0.620916591138472,0,0,0.951576261675644,0.328863867814245,0.118193840883968,0.111231401892069,0,0.471346769748006,0,0,0,0,0.500335809236594,0.316027223465453,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0.098150233615243,0,11.6537190693821,2.36124455769368,0,1.94284397223656,0.233939463462106,0.397901550322736,0,0.11294608203896,0.109940516745429,1.50962843566674,0,0,0.470317296361523,0,0,0,0.297046400327086,0.8453114551668,0,0,0.515663103788617,0,0,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0,0.203974470572744,1.30905207102113,0,0,0,0,0,0.327796715891087,0.126698501011437,0.203977659483963,1.87052183685892,0.0918948995348449,1.0028301571695,0,0.803892390468535,0,0.620597975171371,1.91910583710883,0.714193294391221,0,0.0620747142958579,0.33639558774184,0.12729431655633,0.202117188958219,1.52401723527873,0.684466602170562,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr14:65232928..65232952,- | |short_description=p@chr14:65232928..65232952,- | ||
}} | }} |
Latest revision as of 21:55, 24 July 2015
Short description: | p@chr14:65232928..65232952, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:65232928..65232952, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.31e-09 | 2 |
erythroblast | 4.31e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 4.31e-09 | 2 |
erythroid progenitor cell | 4.31e-09 | 2 |
reticulocyte | 4.31e-09 | 2 |
proerythroblast | 4.31e-09 | 2 |
basophilic erythroblast | 4.31e-09 | 2 |
polychromatophilic erythroblast | 4.31e-09 | 2 |
orthochromatic erythroblast | 4.31e-09 | 2 |
mast cell | 2.47e-07 | 5 |
basophil mast progenitor cell | 2.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.69e-11 | 8 |
lung adenocarcinoma | 2.70e-08 | 2 |