FFCP PHASE1:Hg19::chr15:38276910..38276918,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_ENST00000558081,uc001zjx.1_5end | |||
|cluster_id=chr15:38276910..38276918,+ | |||
|description=CAGE_peak_2_at_ENST00000558081_5end,CAGE_peak_2_at_uc001zjx.1_5end | |||
|id=chr15:38276910..38276918,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.01e-08;6!CL:0000404;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.62e-41;1!UBERON:0003056;1.22e-14;3!UBERON:0008947;4.27e-13;29!CL:0000031;7.01e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.08e-09!4;UBERON:0005058!2.08e-09!4;UBERON:0009113!2.08e-09!4;UBERON:0003295!2.08e-09!4;UBERON:0005562!2.08e-09!4;UBERON:0007023!5.40e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.62e-41;1!UBERON:0001785;6.62e-41;1!UBERON:0002464;6.62e-41;1!UBERON:0004904;6.62e-41;1!UBERON:0001021;6.62e-41;1!UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0003714;3.11e-21;2!UBERON:0005162;3.11e-21;2!UBERON:0000122;3.11e-21;2!UBERON:0003127;4.66e-21;2!UBERON:0005178;7.68e-09;34!UBERON:0002224;7.68e-09;34!UBERON:0002048;3.21e-08;22!UBERON:0000117;3.21e-08;22!UBERON:0000171;3.21e-08;22!UBERON:0000170;3.21e-08;22!UBERON:0000065;1.98e-07;44!UBERON:0003126;5.70e-07;7!UBERON:0001005;5.70e-07;7!UBERON:0005181;8.71e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.62e-41,1;UBERON:0001785,6.62e-41,1;UBERON:0002464,6.62e-41,1;UBERON:0004904,6.62e-41,1;UBERON:0001021,6.62e-41,1;UBERON:0003902,6.62e-41,1;UBERON:0005425,6.62e-41,1;UBERON:0002171,3.30e-40,1;UBERON:0006518,3.30e-40,1;UBERON:0008949,3.30e-40,1;UBERON:0000101,3.30e-40,1;UBERON:0002167,3.30e-40,1;UBERON:0003714,3.11e-21,2;UBERON:0005162,3.11e-21,2;UBERON:0000122,3.11e-21,2;UBERON:0003127,4.66e-21,2;UBERON:0001781,2.53e-11,4;UBERON:0005178,2.76e-11,34;UBERON:0002224,2.76e-11,34;UBERON:0005181,5.49e-11,35;UBERON:0008947,3.49e-10,38;UBERON:0003258,3.49e-10,38;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0000915,1.20e-07,52;UBERON:0000065,2.17e-07,54;UBERON:0003126,5.70e-07,7;UBERON:0001005,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977766799900771,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.854299300541557,3.45849471219265,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,4.28308260777463,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0.426467963801962,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,2.15166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000558081,p2@uc001zjx.1 | |||
}} |
Latest revision as of 01:06, 25 July 2015
Short description: | p2@ENST00000558081, p2@uc001zjx.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000558081_5end, CAGE_peak_2_at_uc001zjx.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENST00000558081, uc001zjx.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.78e-08 | 6 |
neuroblast | 6.78e-08 | 6 |
electrically signaling cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.62e-41 | 1 |
cranial nerve | 6.62e-41 | 1 |
nerve trunk | 6.62e-41 | 1 |
nerve connecting eye with brain | 6.62e-41 | 1 |
nerve | 6.62e-41 | 1 |
retinal neural layer | 6.62e-41 | 1 |
presumptive neural retina | 6.62e-41 | 1 |
lower lobe of right lung | 3.30e-40 | 1 |
right lung lobe | 3.30e-40 | 1 |
lower lobe of lung | 3.30e-40 | 1 |
lobe of lung | 3.30e-40 | 1 |
right lung | 3.30e-40 | 1 |
neural tissue | 3.11e-21 | 2 |
multi cell component structure | 3.11e-21 | 2 |
neuron projection bundle | 3.11e-21 | 2 |
open tracheal system trachea | 4.66e-21 | 2 |
layer of retina | 2.53e-11 | 4 |
thoracic cavity element | 2.76e-11 | 34 |
thoracic cavity | 2.76e-11 | 34 |
thoracic segment organ | 5.49e-11 | 35 |
respiratory primordium | 3.49e-10 | 38 |
endoderm of foregut | 3.49e-10 | 38 |
lung | 3.27e-08 | 22 |
respiratory tube | 3.27e-08 | 22 |
respiration organ | 3.27e-08 | 22 |
pair of lungs | 3.27e-08 | 22 |
lung primordium | 3.27e-08 | 22 |
lung bud | 3.27e-08 | 22 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
thoracic segment of trunk | 1.20e-07 | 52 |
respiratory tract | 2.17e-07 | 54 |
trachea | 5.70e-07 | 7 |
respiratory airway | 5.70e-07 | 7 |