FFCP PHASE1:Hg19::chr19:35632365..35632397,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:35632365..35632397,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr19:35632365..35632397,+ | |||
|id=chr19:35632365..35632397,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.30e-10!53;CL:0000051!5.30e-10!53;CL:0000838!5.68e-10!52;CL:0000236!3.50e-07!14;CL:0000791!7.13e-07!18;CL:0000789!7.13e-07!18;CL:0002420!7.13e-07!18;CL:0002419!7.13e-07!18;CL:0000790!7.13e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.64e-11;13!CL:0000945;2.73e-09;24!CL:0000542;4.07e-08;53!CL:0002322;4.95e-07;5!CL:0000791;7.61e-07;18!CL:0000789;7.61e-07;18!CL:0002419;7.61e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.59e-12,52;CL:0000236,6.40e-12,14;CL:0000542,9.15e-12,53;CL:0000051,9.15e-12,53;CL:0000945,2.30e-09,24;CL:0000826,2.30e-09,24;CL:0002322,4.90e-07,5;CL:0000791,5.24e-07,18;CL:0000789,5.24e-07,18;CL:0002420,5.24e-07,18;CL:0002419,5.24e-07,18;CL:0000790,5.24e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;4.07e-08;53!CL:0000790;7.61e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.84e-19!57;UBERON:0005068!4.84e-19!57;UBERON:0006241!4.84e-19!57;UBERON:0007135!4.84e-19!57;UBERON:0001893!2.04e-18!34;UBERON:0002020!6.28e-18!34;UBERON:0003528!6.28e-18!34;UBERON:0002791!1.05e-17!33;UBERON:0007023!1.30e-17!115;UBERON:0003080!2.04e-17!42;UBERON:0002780!2.85e-17!41;UBERON:0001890!2.85e-17!41;UBERON:0006240!2.85e-17!41;UBERON:0001869!3.46e-17!32;UBERON:0001017!1.39e-16!82;UBERON:0002619!1.48e-16!22;UBERON:0005743!5.22e-16!86;UBERON:0002616!2.32e-15!59;UBERON:0001950!3.06e-15!20;UBERON:0000955!2.42e-14!69;UBERON:0006238!2.42e-14!69;UBERON:0003075!8.57e-14!86;UBERON:0007284!8.57e-14!86;UBERON:0000073!1.70e-13!94;UBERON:0001016!1.70e-13!94;UBERON:0000956!6.34e-13!25;UBERON:0000203!6.34e-13!25;UBERON:0002346!2.83e-12!90;UBERON:0003056!2.68e-11!61;UBERON:0000033!1.20e-07!123;UBERON:0002420!4.30e-07!9;UBERON:0007245!4.30e-07!9;UBERON:0010009!4.30e-07!9;UBERON:0010011!4.30e-07!9;UBERON:0000454!4.30e-07!9;UBERON:0000153!4.37e-07!129;UBERON:0007811!4.37e-07!129;UBERON:0000178!9.81e-07!15;UBERON:0000179!9.81e-07!15;UBERON:0000463!9.81e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.71e-28;34!UBERON:0001869;2.29e-27;32!UBERON:0002619;2.43e-27;22!UBERON:0002791;3.81e-27;32!UBERON:0003528;5.78e-27;34!UBERON:0002020;5.78e-27;34!UBERON:0001950;4.62e-25;20!UBERON:0000956;4.09e-23;25!UBERON:0000203;4.09e-23;25!UBERON:0002780;1.69e-22;41!UBERON:0001890;1.69e-22;41!UBERON:0000073;2.19e-18;53!UBERON:0002616;2.19e-18;53!UBERON:0000955;7.51e-13;68!UBERON:0001017;1.47e-12;75!UBERON:0002420;4.17e-11;9!UBERON:0007245;4.17e-11;9!UBERON:0010009;4.17e-11;9!UBERON:0010011;4.17e-11;9!UBERON:0000454;4.17e-11;9!UBERON:0001016;1.73e-10;83!UBERON:0000125;5.35e-10;9!UBERON:0002308;5.35e-10;9!UBERON:0000200;3.48e-09;6!UBERON:0001871;8.66e-09;6!UBERON:0009663;1.04e-08;7!UBERON:0000349;1.73e-07;5!UBERON:0001872;2.76e-07;5!UBERON:0002021;3.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.42e-35,56;UBERON:0005068,2.42e-35,56;UBERON:0006241,2.42e-35,56;UBERON:0007135,2.42e-35,56;UBERON:0000073,6.69e-33,53;UBERON:0002616,6.69e-33,53;UBERON:0001893,7.71e-33,34;UBERON:0003528,5.79e-32,34;UBERON:0002020,5.79e-32,34;UBERON:0002780,2.51e-31,41;UBERON:0001890,2.51e-31,41;UBERON:0003080,2.51e-31,41;UBERON:0006240,2.51e-31,41;UBERON:0001869,1.09e-30,32;UBERON:0002791,1.82e-30,32;UBERON:0001017,3.51e-30,81;UBERON:0000955,8.20e-28,68;UBERON:0006238,8.20e-28,68;UBERON:0002619,1.81e-27,22;UBERON:0001016,2.28e-26,89;UBERON:0001950,3.43e-25,20;UBERON:0000956,3.16e-23,25;UBERON:0000203,3.16e-23,25;UBERON:0003075,5.01e-22,82;UBERON:0007284,5.01e-22,82;UBERON:0007023,2.03e-21,114;UBERON:0002346,3.11e-20,86;UBERON:0003056,3.63e-20,61;UBERON:0010371,1.16e-15,104;UBERON:0002420,4.04e-11,9;UBERON:0007245,4.04e-11,9;UBERON:0010009,4.04e-11,9;UBERON:0010011,4.04e-11,9;UBERON:0000454,4.04e-11,9;UBERON:0010314,6.04e-11,132;UBERON:0000125,3.84e-10,9;UBERON:0002308,3.84e-10,9;UBERON:0000200,3.59e-09,6;UBERON:0004121,5.20e-09,171;UBERON:0000924,5.20e-09,171;UBERON:0006601,5.20e-09,171;UBERON:0001871,7.10e-09,6;UBERON:0009663,9.78e-09,7;UBERON:0000349,1.78e-07,5;UBERON:0001872,2.57e-07,5;UBERON:0002021,3.26e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.436882744260345,1.58260186937072,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.14620108621927,0.57470412614962,1.02324015707783,0.393364276848904,0,0.464448369948228,0,0,0,1.85921281392724,1.9903692548239,0,0,0.200544447470142,0.651032612147555,1.11957737119962,1.6194683300949,0.77272670290256,0,0,0,0,1.23350366406548,0,0.28769239232215,0.512321413058201,0,0,0,2.70852973188684,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0.422510572623884,0.425208599930087,0,0,0,0,0.285012743741249,0.99458338599545,0.547992461293902,7.03984977845291,7.09980194640771,7.11607403090844,1.28019066769952,5.20514783146816,12.6445536789986,8.59358334620321,12.4026988089597,1.70763890732835,1.76171156811282,4.58727873750275,0,0.560508562981536,0.263384084775077,1.96709770113833,1.17903228824749,2.46721798799411,0.83593247695339,2.28145586643513,1.89379122293893,0,4.01077644786625,4.41908861212256,7.08908462667588,2.97884250141517,1.79327847615945,3.77172107923647,2.30213066445147,3.31620021343018,2.02862160014537,1.03800594213442,0.267540828089713,0,1.69964014046349,3.44898444241729,2.40539211837841,2.27717722817553,0.95569624297229,3.25541726928209,0.950452044448374,2.55977702432214,0.76791966692651,2.49861453104692,1.4206635122641,1.64225599384209,0.80642697289893,1.33720097891754,1.59306844271079,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0,0,0.175669571386252,5.76307932189936,0.728590576585084,0,0,0.174129737299267,0.930705723632056,0,0.571994910780128,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,2.93649605346934,2.47606237746061,0,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.267899184852239,0.673588117878509,0.788280363383256,0,0.949265659568129,1.09921046358244,0,0,0.436094052142534,0,0,0,0,1.41867352879343,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0.576175924479999,1.64025002283658,0.624320153660641,0,0.149448680551801,0.23486899728753,0.161872944368132,0.421352420106746,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.573609190778008,15.2467132661994,6.89154795271723,9.76029120103954,6.53064646596834,8.32658807889574,7.66452454059243,0,4.5026865673502,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0.352226082707465,0.577465791044295,0,0,0,0,0.984868024349589,0.936017060556951,1.18904929830983,0.93733833986777,0.671928512795438,0.425325291727159,0.0895585227028483,0,0.383382679165211,3.4486426652716,6.4275356829655,8.50045273717165,7.35011762426503,6.81709140502452,0.825472625798197,1.52795370223311,0,3.4214489204541,1.43958489784653,1.20137223137567,6.85983438313388,0,0,0,0.258543431515556,7.15312891703765,0,0.26593811658487,0,0,0,0.532844358032199,0,1.08524321078289,0.823240336780769,0,0.355391948742546,0,0.301439377059586,6.10073421020206,1.09970290300263,10.9461402577071,3.51579964002488,0,0,1.14861935834114,0,0,0,0,0,0.985153801009636,1.50939302401662,1.66845947163673,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0,0.347534457872331,0.587403472388222,0.343143423810856,0.620304078368662,1.07857100409308,0.74709290462411,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.200506470303285,0.368323955743585,0.229628896329213,0.182091168006717,0.786746489756545,1.35359883872224,1.61732207919271,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0.215915916102139,0,0,1.00337954770971,0.509752546090077,0.831076008928724,0,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0,0.275673144969061,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0.823611089208164,0.235624804691373,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0,1.06428319221179,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,4.05958087385735,6.117097657139,4.5571774973933,0.476463550915578,2.46817363851717,1.29694662238543,3.7802200606668,4.75875105776562,0.106824071127473,0,4.16568367167754,0.371606350251437,0,0,0.9565576363729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| |||
|short_description=p@chr19:35632365..35632397,+ | |||
}} |
Latest revision as of 06:34, 26 July 2015
Short description: | p@chr19:35632365..35632397, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35632365..35632397, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.59e-12 | 52 |
B cell | 6.40e-12 | 14 |
lymphocyte | 9.15e-12 | 53 |
common lymphoid progenitor | 9.15e-12 | 53 |
lymphocyte of B lineage | 2.30e-09 | 24 |
pro-B cell | 2.30e-09 | 24 |
embryonic stem cell | 4.90e-07 | 5 |
mature alpha-beta T cell | 5.24e-07 | 18 |
alpha-beta T cell | 5.24e-07 | 18 |
immature T cell | 5.24e-07 | 18 |
mature T cell | 5.24e-07 | 18 |
immature alpha-beta T cell | 5.24e-07 | 18 |