FFCP PHASE1:Hg19::chr19:45977515..45977522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45977515..45977522,+ | |||
|coexpression_cluster_id=C269 | |||
|description=CAGE_peak_at_chr19:45977515..45977522,+ | |description=CAGE_peak_at_chr19:45977515..45977522,+ | ||
|id=chr19:45977515..45977522,+ | |id=chr19:45977515..45977522,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.26e-27!42;CL:0000860!1.43e-24!45;CL:0000766!8.72e-22!76;CL:0000738!9.39e-22!140;CL:0000557!1.99e-20!71;CL:0002031!1.83e-19!124;CL:0000839!4.27e-19!70;CL:0002087!1.16e-17!119;CL:0002009!1.24e-17!65;CL:0002194!1.01e-16!63;CL:0000576!1.01e-16!63;CL:0000040!1.01e-16!63;CL:0000559!1.01e-16!63;CL:0000037!2.32e-15!172;CL:0000566!2.32e-15!172;CL:0002032!1.02e-14!165;CL:0000837!1.02e-14!165;CL:0000988!7.63e-14!182;CL:0000763!4.79e-13!112;CL:0000049!4.79e-13!112;CL:0000134!7.90e-08!358;CL:0002320!2.08e-07!365;CL:0000623!2.09e-07!3;CL:0000825!2.09e-07!3 | |ontology_enrichment_celltype=CL:0002057!7.26e-27!42;CL:0000860!1.43e-24!45;CL:0000766!8.72e-22!76;CL:0000738!9.39e-22!140;CL:0000557!1.99e-20!71;CL:0002031!1.83e-19!124;CL:0000839!4.27e-19!70;CL:0002087!1.16e-17!119;CL:0002009!1.24e-17!65;CL:0002194!1.01e-16!63;CL:0000576!1.01e-16!63;CL:0000040!1.01e-16!63;CL:0000559!1.01e-16!63;CL:0000037!2.32e-15!172;CL:0000566!2.32e-15!172;CL:0002032!1.02e-14!165;CL:0000837!1.02e-14!165;CL:0000988!7.63e-14!182;CL:0000763!4.79e-13!112;CL:0000049!4.79e-13!112;CL:0000134!7.90e-08!358;CL:0002320!2.08e-07!365;CL:0000623!2.09e-07!3;CL:0000825!2.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.63e-23;5!CL:0002541;2.49e-17;3!CL:0000163;2.36e-13;9!CL:0001014;1.16e-07;2!CL:0001016;1.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.51e-23,5;CL:0002028,1.51e-23,5;CL:0002541,1.64e-17,3;CL:0000163,2.27e-13,9;CL:0000738,1.23e-11,136;CL:0002031,4.15e-11,120;CL:0000557,5.42e-11,67;CL:0000766,3.41e-10,72;CL:0002032,1.34e-09,161;CL:0000837,1.34e-09,161;CL:0000037,3.90e-09,168;CL:0000988,1.36e-08,177;CL:0000839,1.42e-08,66;CL:0000763,2.62e-08,108;CL:0000049,2.62e-08,108;CL:0001014,1.12e-07,2;CL:0001016,1.12e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.25e-13;1!UBERON:0003852;1.25e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.59e-18!80;UBERON:0001474!4.47e-18!86;UBERON:0002390!9.11e-15!102;UBERON:0003061!9.11e-15!102;UBERON:0004765!4.40e-14!101;UBERON:0001434!4.40e-14!101;UBERON:0002193!1.16e-12!112;UBERON:0002405!3.58e-11!115;UBERON:0002384!7.67e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.49e-17;3!UBERON:0000920;2.49e-17;3!UBERON:0005705;1.25e-13;1!UBERON:0008193;1.25e-13;1!UBERON:0010912;1.25e-13;1!UBERON:0002514;1.25e-13;1!UBERON:0003457;1.25e-13;1!UBERON:0008907;1.25e-13;1!UBERON:0008001;1.25e-13;1!UBERON:0007213;1.25e-13;1!UBERON:0009891;1.25e-13;1!UBERON:0007914;1.25e-13;1!UBERON:0007375;1.25e-13;1!UBERON:0003323;1.25e-13;1!UBERON:0010258;1.25e-13;1!UBERON:0005253;1.25e-13;1!UBERON:0007842;1.25e-13;1!UBERON:0002397;1.25e-13;1!UBERON:0003113;1.25e-13;1!UBERON:0003277;1.25e-13;1!UBERON:0001709;1.25e-13;1!UBERON:0002244;1.25e-13;1!UBERON:0005620;1.25e-13;1!UBERON:0010364;1.25e-13;1!UBERON:0004288;1.25e-13;1!UBERON:0004089;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.64e-17,3;UBERON:0005705,1.61e-13,1;UBERON:0008193,1.61e-13,1;UBERON:0010912,1.61e-13,1;UBERON:0002514,1.61e-13,1;UBERON:0003457,1.61e-13,1;UBERON:0008907,1.61e-13,1;UBERON:0008001,1.61e-13,1;UBERON:0007213,1.61e-13,1;UBERON:0009891,1.61e-13,1;UBERON:0007914,1.61e-13,1;UBERON:0009292,1.61e-13,1;UBERON:0003099,1.61e-13,1;UBERON:0007375,1.61e-13,1;UBERON:0003323,1.61e-13,1;UBERON:0010258,1.61e-13,1;UBERON:0007842,1.61e-13,1;UBERON:0009494,1.61e-13,1;UBERON:0010042,1.61e-13,1;UBERON:0010045,1.61e-13,1;UBERON:0010259,1.61e-13,1;UBERON:0010359,1.61e-13,1;UBERON:0009526,1.61e-13,1;UBERON:0002397,1.61e-13,1;UBERON:0003113,1.61e-13,1;UBERON:0003277,1.61e-13,1;UBERON:0001709,1.61e-13,1;UBERON:0004066,1.61e-13,1;UBERON:0002244,1.61e-13,1;UBERON:0005620,1.61e-13,1;UBERON:0004362,1.61e-13,1;UBERON:0010364,1.61e-13,1;UBERON:0010046,1.61e-13,1;UBERON:0005868,1.61e-13,1;UBERON:0007238,1.61e-13,1;UBERON:0004288,1.61e-13,1;UBERON:0004068,1.61e-13,1;UBERON:0010334,1.61e-13,1;UBERON:0003852,1.61e-13,1;UBERON:0010253,1.61e-13,1;UBERON:0001474,3.55e-11,82;UBERON:0004765,4.21e-10,90;UBERON:0002371,1.31e-09,76;UBERON:0001434,5.36e-09,100;UBERON:0003124,4.92e-08,7;UBERON:0002405,1.02e-07,93;UBERON:0005253,2.12e-07,2;UBERON:0004089,2.12e-07,2;UBERON:0002390,2.78e-07,98;UBERON:0003061,2.78e-07,98;UBERON:0002384,9.92e-07,371 | |||
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| ||
|short_description=p@chr19:45977515..45977522,+ | |short_description=p@chr19:45977515..45977522,+ | ||
}} | }} |
Latest revision as of 15:03, 27 July 2015
Short description: | p@chr19:45977515..45977522, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45977515..45977522, + |
Coexpression cluster: | C269_Basophils_Mast_Eosinophils_mature_CD14_chorionic_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.51e-23 | 5 |
basophil mast progenitor cell | 1.51e-23 | 5 |
chorionic membrane mesenchymal stem cell | 1.64e-17 | 3 |
endocrine cell | 2.27e-13 | 9 |
leukocyte | 1.23e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 4.15e-11 | 120 |
granulocyte monocyte progenitor cell | 5.42e-11 | 67 |
myeloid leukocyte | 3.41e-10 | 72 |
hematopoietic oligopotent progenitor cell | 1.34e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-09 | 161 |
hematopoietic stem cell | 3.90e-09 | 168 |
hematopoietic cell | 1.36e-08 | 177 |
myeloid lineage restricted progenitor cell | 1.42e-08 | 66 |
myeloid cell | 2.62e-08 | 108 |
common myeloid progenitor | 2.62e-08 | 108 |
CD1a-positive Langerhans cell | 1.12e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-07 | 2 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |