FFCP PHASE1:Hg19::chr19:54062603..54062676,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:54062603..54062676,+ to FFCP PHASE1:Hg19::chr19:54062603..54062676,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:54062603..54062676,+ | |||
|coexpression_cluster_id=C437 | |||
|description=CAGE_peak_at_chr19:54062603..54062676,+ | |||
|id=chr19:54062603..54062676,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.89e-13!140;CL:0002057!7.44e-13!42;CL:0000860!5.16e-12!45;CL:0002031!5.59e-11!124;CL:0000557!9.59e-11!71;CL:0002087!1.74e-10!119;CL:0000766!2.06e-10!76;CL:0000839!1.97e-09!70;CL:0002009!4.10e-09!65;CL:0002194!3.20e-08!63;CL:0000576!3.20e-08!63;CL:0000040!3.20e-08!63;CL:0000559!3.20e-08!63;CL:0000037!4.85e-08!172;CL:0000566!4.85e-08!172;CL:0002032!2.09e-07!165;CL:0000837!2.09e-07!165;CL:0000988!4.00e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.45e-12;33!CL:0002057;4.45e-12;33!CL:0000624;8.60e-12;6!CL:0000473;1.69e-09;39!CL:0000234;1.69e-09;39!CL:0000576;1.34e-07;48!CL:0000791;1.58e-07;18!CL:0000789;1.58e-07;18!CL:0002419;1.58e-07;18!CL:0000766;1.66e-07;69!CL:0000623;3.83e-07;3!CL:0000226;7.55e-07;3!CL:0000842;7.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-17,136;CL:0002031,3.87e-16,120;CL:0002087,2.41e-15,115;CL:0000860,7.74e-13,42;CL:0002057,7.74e-13,42;CL:0000557,1.68e-12,67;CL:0000037,1.76e-12,168;CL:0000624,6.09e-12,6;CL:0000473,1.37e-11,48;CL:0000234,1.37e-11,48;CL:0000988,3.48e-11,177;CL:0002032,4.48e-11,161;CL:0000837,4.48e-11,161;CL:0000766,4.82e-11,72;CL:0002009,1.05e-10,61;CL:0000839,1.44e-10,66;CL:0002194,4.12e-09,59;CL:0000576,4.12e-09,59;CL:0000040,4.12e-09,59;CL:0000559,4.12e-09,59;CL:0000791,1.35e-07,18;CL:0000789,1.35e-07,18;CL:0002420,1.35e-07,18;CL:0002419,1.35e-07,18;CL:0000790,1.35e-07,18;CL:0000623,3.89e-07,3;CL:0000825,3.89e-07,3;CL:0000763,6.25e-07,108;CL:0000049,6.25e-07,108;CL:0000226,7.47e-07,3;CL:0000842,7.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-10;42!CL:0000790;1.58e-07;18!UBERON:0005062;2.34e-07;4!UBERON:0007284;2.34e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-19!115;UBERON:0001049!1.18e-13!57;UBERON:0005068!1.18e-13!57;UBERON:0006241!1.18e-13!57;UBERON:0007135!1.18e-13!57;UBERON:0002780!3.27e-13!41;UBERON:0001890!3.27e-13!41;UBERON:0006240!3.27e-13!41;UBERON:0003080!1.49e-12!42;UBERON:0002616!3.48e-11!59;UBERON:0000955!8.49e-11!69;UBERON:0006238!8.49e-11!69;UBERON:0001017!1.46e-10!82;UBERON:0002390!6.17e-10!102;UBERON:0003061!6.17e-10!102;UBERON:0002020!1.19e-09!34;UBERON:0003528!1.19e-09!34;UBERON:0001893!1.27e-09!34;UBERON:0005743!1.42e-09!86;UBERON:0002791!2.40e-09!33;UBERON:0002346!4.69e-09!90;UBERON:0001474!5.48e-09!86;UBERON:0002371!6.51e-09!80;UBERON:0001869!1.05e-08!32;UBERON:0003075!1.52e-08!86;UBERON:0007284!1.52e-08!86;UBERON:0002193!2.06e-08!112;UBERON:0000073!4.69e-08!94;UBERON:0001016!4.69e-08!94;UBERON:0001950!1.39e-07!20;UBERON:0002619!2.82e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.51e-07;4!UBERON:0010133;1.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.59e-11,76;UBERON:0001474,1.31e-10,82;UBERON:0002390,2.57e-10,98;UBERON:0003061,2.57e-10,98;UBERON:0002193,2.68e-09,108;UBERON:0002405,2.71e-09,93;UBERON:0004765,5.45e-09,90;UBERON:0007023,5.88e-09,114;UBERON:0001049,7.02e-09,56;UBERON:0005068,7.02e-09,56;UBERON:0006241,7.02e-09,56;UBERON:0007135,7.02e-09,56;UBERON:0001434,4.71e-08,100;UBERON:0002346,7.45e-08,86;UBERON:0000073,9.67e-08,53;UBERON:0002616,9.67e-08,53;UBERON:0003296,2.17e-07,4;UBERON:0010133,2.17e-07,4;UBERON:0003075,4.63e-07,82;UBERON:0007284,4.63e-07,82;UBERON:0002780,5.41e-07,41;UBERON:0001890,5.41e-07,41;UBERON:0003080,5.41e-07,41;UBERON:0006240,5.41e-07,41 | |||
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| ||
|short_description=p@chr19:54062603..54062676,+ | |||
}} | }} |
Latest revision as of 17:00, 27 July 2015
Short description: | p@chr19:54062603..54062676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54062603..54062676, + |
Coexpression cluster: | C437_CD4_CD8_Natural_CD19_thyroid_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.59e-11 | 76 |
bone element | 1.31e-10 | 82 |
hematopoietic system | 2.57e-10 | 98 |
blood island | 2.57e-10 | 98 |
hemolymphoid system | 2.68e-09 | 108 |
immune system | 2.71e-09 | 93 |
skeletal element | 5.45e-09 | 90 |
adult organism | 5.88e-09 | 114 |
neural tube | 7.02e-09 | 56 |
neural rod | 7.02e-09 | 56 |
future spinal cord | 7.02e-09 | 56 |
neural keel | 7.02e-09 | 56 |
skeletal system | 4.71e-08 | 100 |
neurectoderm | 7.45e-08 | 86 |
regional part of nervous system | 9.67e-08 | 53 |
regional part of brain | 9.67e-08 | 53 |
gland of diencephalon | 2.17e-07 | 4 |
neuroendocrine gland | 2.17e-07 | 4 |
neural plate | 4.63e-07 | 82 |
presumptive neural plate | 4.63e-07 | 82 |
regional part of forebrain | 5.41e-07 | 41 |
forebrain | 5.41e-07 | 41 |
anterior neural tube | 5.41e-07 | 41 |
future forebrain | 5.41e-07 | 41 |