FFCP PHASE1:Hg19::chr20:17259506..17259509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:17259506..17259509,+ | |||
|description=CAGE_peak_at_chr20:17259506..17259509,+ | |description=CAGE_peak_at_chr20:17259506..17259509,+ | ||
|id=chr20:17259506..17259509,+ | |id=chr20:17259506..17259509,+ | ||
|ontology_enrichment_celltype=CL:0000242!2.17e-08!2 | |ontology_enrichment_celltype=CL:0000242!2.17e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.37e-23;2!CL:0000242;4.37e-23;2!CL:0000312;8.12e-10;5!CL:0000240;2.52e-08;6!CL:0000311;2.52e-08;6!CL:0000079;2.52e-08;6!CL:0000237;2.52e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.91e-23,2;CL:0000312,7.77e-10,5;CL:0000240,2.43e-08,6;CL:0000311,2.43e-08,6;CL:0000079,2.43e-08,6;CL:0000237,2.43e-08,6;CL:0000036,2.43e-08,6;CL:0000357,2.43e-08,6;CL:0000114,2.43e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;2.52e-08;6!CL:0000114;2.52e-08;6!UBERON:0010122;9.53e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.11e-10;10!DOID:3119;9.90e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.93e-11,10;DOID:3119,9.90e-08,14 | |||
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| ||
|short_description=p@chr20:17259506..17259509,+ | |short_description=p@chr20:17259506..17259509,+ | ||
}} | }} |
Latest revision as of 12:04, 28 July 2015
Short description: | p@chr20:17259506..17259509, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:17259506..17259509, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.91e-23 | 2 |
keratinocyte | 7.77e-10 | 5 |
stratified squamous epithelial cell | 2.43e-08 | 6 |
keratin accumulating cell | 2.43e-08 | 6 |
stratified epithelial cell | 2.43e-08 | 6 |
keratinizing barrier epithelial cell | 2.43e-08 | 6 |
epithelial fate stem cell | 2.43e-08 | 6 |
stratified epithelial stem cell | 2.43e-08 | 6 |
surface ectodermal cell | 2.43e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.93e-11 | 10 |
gastrointestinal system cancer | 9.90e-08 | 14 |