FFCP PHASE1:Hg19::chr3:146874115..146874120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:146874115..146874120,- | |||
|coexpression_cluster_id=C1079 | |coexpression_cluster_id=C1079 | ||
|description=CAGE_peak_at_chr3:146874115..146874120,- | |description=CAGE_peak_at_chr3:146874115..146874120,- | ||
|id=chr3:146874115..146874120,- | |id=chr3:146874115..146874120,- | ||
|ontology_enrichment_celltype=CL:0000708!3.33e-07!3;CL:0000128!3.78e-07!7;CL:0000126!3.78e-07!7;CL:0000127!3.78e-07!7;CL:0002453!3.78e-07!7;CL:0002603!3.91e-07!3 | |ontology_enrichment_celltype=CL:0000708!3.33e-07!3;CL:0000128!3.78e-07!7;CL:0000126!3.78e-07!7;CL:0000127!3.78e-07!7;CL:0002453!3.78e-07!7;CL:0002603!3.91e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000708;4.72e-14;3!CL:0000228;3.63e-11;1!CL:0002372;3.63e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,5.05e-14,3;CL:0000228,4.01e-11,1;CL:0002372,4.01e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.15e-31;3!UBERON:0010115;1.52e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.82e-11;4!DOID:1325;8.36e-07;7!DOID:3904;8.36e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.82e-11,4;DOID:1325,8.37e-07,7;DOID:3904,8.37e-07,7 | |||
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| ||
|short_description=p@chr3:146874115..146874120,- | |short_description=p@chr3:146874115..146874120,- | ||
}} | }} |
Latest revision as of 16:41, 29 July 2015
Short description: | p@chr3:146874115..146874120, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:146874115..146874120, - |
Coexpression cluster: | C1079_synovial_cerebellum_small_Smooth_medulla_spinal_dura |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 5.05e-14 | 3 |
multinucleate cell | 4.01e-11 | 1 |
myotube | 4.01e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 5.82e-32 | 15 |
chordal neural plate | 5.82e-32 | 15 |
segmental subdivision of hindbrain | 1.46e-29 | 12 |
hindbrain | 1.46e-29 | 12 |
presumptive hindbrain | 1.46e-29 | 12 |
segmental subdivision of nervous system | 2.87e-27 | 13 |
cerebellum | 4.28e-27 | 6 |
rhombic lip | 4.28e-27 | 6 |
regional part of metencephalon | 3.59e-18 | 9 |
metencephalon | 3.59e-18 | 9 |
future metencephalon | 3.59e-18 | 9 |
medulla oblongata | 3.87e-14 | 3 |
myelencephalon | 3.87e-14 | 3 |
future myelencephalon | 3.87e-14 | 3 |
blood-cerebrospinal fluid barrier | 5.05e-14 | 3 |
central nervous system | 7.35e-13 | 81 |
dura mater | 1.60e-11 | 1 |
future meninx | 1.60e-11 | 1 |
ectomeninx | 1.60e-11 | 1 |
future dura mater | 1.60e-11 | 1 |
nervous system | 1.92e-11 | 89 |
brain | 2.81e-10 | 68 |
future brain | 2.81e-10 | 68 |
neural tube | 2.99e-10 | 56 |
neural rod | 2.99e-10 | 56 |
future spinal cord | 2.99e-10 | 56 |
neural keel | 2.99e-10 | 56 |
brain vasculature | 8.84e-09 | 5 |
regional part of nervous system | 2.36e-08 | 53 |
regional part of brain | 2.36e-08 | 53 |
brainstem | 1.63e-07 | 6 |
neural plate | 9.77e-07 | 82 |
presumptive neural plate | 9.77e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.82e-11 | 4 |
bronchus cancer | 8.37e-07 | 7 |
bronchogenic carcinoma | 8.37e-07 | 7 |