FFCP PHASE1:Hg19::chr3:194299051..194299068,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:194299051..194299068,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr3:194299051..194299068,+ | |description=CAGE_peak_at_chr3:194299051..194299068,+ | ||
|id=chr3:194299051..194299068,+ | |id=chr3:194299051..194299068,+ | ||
|ontology_enrichment_celltype=CL:0000860;2.93e-44;33!CL:0002057;2.93e-44;33!CL:0000473;3.63e-38;39!CL:0000234;3.63e-38;39!CL:0000576;1.58e-23;48!CL:0000766;4.46e-19;69!CL:0000359;1.19e-16;32!CL:0002494;1.05e-10;16!CL:0000192;2.87e-09;43!CL:0002595;1.04e-08;5!CL:0000763;2.49e-08;100!CL:0000569;8.77e-08;4!CL:0002087;8.95e-07;104 | |ontology_enrichment_celltype=CL:0002057!1.23e-32!42;CL:0000860!1.29e-30!45;CL:0000557!1.81e-30!71;CL:0000766!5.61e-30!76;CL:0002009!2.82e-29!65;CL:0000839!3.47e-28!70;CL:0002194!1.09e-27!63;CL:0000576!1.09e-27!63;CL:0000040!1.09e-27!63;CL:0000559!1.09e-27!63;CL:0000048!3.72e-24!430;CL:0000034!3.48e-23!444;CL:0000723!4.22e-23!436;CL:0000763!3.43e-18!112;CL:0000049!3.43e-18!112;CL:0000134!2.97e-17!358;CL:0002320!3.87e-16!365;CL:0000738!3.76e-14!140;CL:0000219!3.75e-13!390;CL:0002371!5.58e-13!591;CL:0000359!5.65e-13!32;CL:0000144!1.12e-12!625;CL:0002031!1.88e-12!124;CL:0002087!1.12e-11!119;CL:0000012!2.28e-10!682;CL:0000548!1.41e-09!679;CL:0000004!1.41e-09!679;CL:0000255!1.41e-09!679;CL:0000037!4.61e-09!172;CL:0000566!4.61e-09!172;CL:0002494!9.49e-09!16;CL:0000192!1.03e-08!42;CL:0000514!1.03e-08!42;CL:0002032!1.26e-08!165;CL:0000837!1.26e-08!165;CL:0000988!5.67e-08!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.93e-44;33!CL:0002057;2.93e-44;33!CL:0000473;3.63e-38;39!CL:0000234;3.63e-38;39!CL:0000576;1.58e-23;48!CL:0000766;4.46e-19;69!CL:0000359;1.19e-16;32!CL:0002494;1.05e-10;16!CL:0000192;2.87e-09;43!CL:0002595;1.04e-08;5!CL:0000763;2.49e-08;100!CL:0000569;8.77e-08;4!CL:0002087;8.95e-07;104 | ||
|ontology_enrichment_disease=DOID:2394;2.64e-14;14!DOID:120;3.72e-07;27 | |ontology_enrichment_celltype_v019_2=CL:0000473,5.04e-47,48;CL:0000234,5.04e-47,48;CL:0000860,2.68e-44,42;CL:0002057,2.68e-44,42;CL:0000766,7.85e-41,72;CL:0000557,1.26e-40,67;CL:0002009,1.09e-39,61;CL:0000839,2.50e-37,66;CL:0002194,3.86e-37,59;CL:0000576,3.86e-37,59;CL:0000040,3.86e-37,59;CL:0000559,3.86e-37,59;CL:0000034,4.22e-28,441;CL:0000048,4.61e-28,427;CL:0000723,2.80e-27,433;CL:0000763,4.85e-25,108;CL:0000049,4.85e-25,108;CL:0000738,4.92e-22,136;CL:0002031,1.11e-19,120;CL:0000134,4.84e-19,354;CL:0002320,3.34e-18,361;CL:0002087,4.04e-18,115;CL:0000359,7.78e-18,32;CL:0000219,2.88e-15,386;CL:0000037,5.71e-15,168;CL:0002032,1.89e-14,161;CL:0000837,1.89e-14,161;CL:0000988,1.78e-13,177;CL:0000192,9.48e-12,43;CL:0000514,9.48e-12,43;CL:0002494,9.03e-11,16;CL:0002595,1.00e-08,5;CL:0000187,5.41e-08,55;CL:0000569,8.79e-08,4;CL:0000011,8.79e-08,4;CL:0000680,2.58e-07,58;CL:0000056,2.58e-07,58;CL:0000355,2.58e-07,58 | ||
|ontology_enrichment_uberon=UBERON:0001637;2.92e-14;42!UBERON:0003509;2.92e-14;42!UBERON:0004572;2.92e-14;42!UBERON:0004573;1.22e-13;33!UBERON:0004571;1.22e-13;33!UBERON:0003834;1.04e-08;5!UBERON:0001533;1.04e-08;5!UBERON:0002118;1.14e-08;5!UBERON:0000948;1.82e-08;22!UBERON:0007500;2.41e-08;56!UBERON:0001981;2.41e-08;56!UBERON:0004537;2.41e-08;56!UBERON:0003513;2.99e-08;7!UBERON:0007100;4.06e-07;25!UBERON:0000992;4.26e-07;13 | |ontology_enrichment_development_v019=CL:0002057;4.49e-33;42!CL:0000514;2.87e-09;43!CL:0000011;8.77e-08;4!CL:0000049;2.60e-07;108 | ||
|ontology_enrichment_disease=DOID:2394!2.41e-10!14;DOID:120!3.50e-07!27;DOID:193!3.70e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.64e-14;14!DOID:120;3.72e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.15e-14,14;DOID:120,3.15e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003081!6.21e-36!216;UBERON:0002371!2.44e-28!80;UBERON:0001474!4.74e-26!86;UBERON:0002204!4.10e-24!167;UBERON:0002390!1.10e-21!102;UBERON:0003061!1.10e-21!102;UBERON:0004765!4.56e-20!101;UBERON:0001434!4.56e-20!101;UBERON:0002405!1.55e-19!115;UBERON:0002193!2.07e-19!112;UBERON:0001637!8.06e-19!42;UBERON:0003509!8.06e-19!42;UBERON:0004572!8.06e-19!42;UBERON:0004872!1.45e-16!84;UBERON:0002384!5.31e-16!375;UBERON:0000926!1.77e-15!448;UBERON:0004120!1.77e-15!448;UBERON:0006603!1.77e-15!448;UBERON:0001981!5.18e-14!60;UBERON:0007500!5.18e-14!60;UBERON:0004537!5.18e-14!60;UBERON:0006965!5.18e-14!60;UBERON:0004573!2.89e-13!33;UBERON:0004571!2.89e-13!33;UBERON:0000055!4.88e-12!69;UBERON:0004535!1.92e-11!110;UBERON:0003914!3.44e-11!118;UBERON:0001009!1.04e-10!113;UBERON:0002049!1.81e-09!79;UBERON:0007798!1.81e-09!79;UBERON:0000948!1.88e-09!24;UBERON:0005498!1.88e-09!24;UBERON:0004140!1.88e-09!24;UBERON:0009881!1.88e-09!24;UBERON:0004141!1.88e-09!24;UBERON:0003084!1.88e-09!24;UBERON:0007005!1.88e-09!24;UBERON:0004139!1.88e-09!24;UBERON:0004291!1.88e-09!24;UBERON:0007100!8.98e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.92e-14;42!UBERON:0003509;2.92e-14;42!UBERON:0004572;2.92e-14;42!UBERON:0004573;1.22e-13;33!UBERON:0004571;1.22e-13;33!UBERON:0003834;1.04e-08;5!UBERON:0001533;1.04e-08;5!UBERON:0002118;1.14e-08;5!UBERON:0000948;1.82e-08;22!UBERON:0007500;2.41e-08;56!UBERON:0001981;2.41e-08;56!UBERON:0004537;2.41e-08;56!UBERON:0003513;2.99e-08;7!UBERON:0007100;4.06e-07;25!UBERON:0000992;4.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.56e-41,203;UBERON:0002371,3.85e-36,76;UBERON:0001474,4.75e-34,82;UBERON:0002204,8.40e-31,167;UBERON:0004765,9.36e-30,90;UBERON:0002405,1.09e-29,93;UBERON:0002390,3.54e-29,98;UBERON:0003061,3.54e-29,98;UBERON:0000926,4.03e-28,315;UBERON:0004120,4.03e-28,315;UBERON:0006603,4.03e-28,315;UBERON:0001434,1.03e-26,100;UBERON:0002193,2.36e-26,108;UBERON:0001637,1.06e-19,42;UBERON:0003509,1.06e-19,42;UBERON:0004572,1.06e-19,42;UBERON:0002384,4.62e-17,371;UBERON:0004872,8.75e-17,83;UBERON:0004573,1.95e-15,33;UBERON:0004571,1.95e-15,33;UBERON:0007500,4.12e-14,59;UBERON:0001981,4.12e-14,59;UBERON:0004537,4.12e-14,59;UBERON:0006965,4.12e-14,59;UBERON:0000055,3.16e-12,68;UBERON:0004535,3.20e-12,109;UBERON:0001009,1.28e-11,112;UBERON:0000948,2.27e-10,24;UBERON:0005498,2.27e-10,24;UBERON:0004140,2.27e-10,24;UBERON:0009881,2.27e-10,24;UBERON:0004141,2.27e-10,24;UBERON:0003084,2.27e-10,24;UBERON:0007005,2.27e-10,24;UBERON:0004139,2.27e-10,24;UBERON:0004291,2.27e-10,24;UBERON:0002049,1.09e-09,78;UBERON:0007798,1.09e-09,78;UBERON:0003914,4.11e-09,117;UBERON:0007100,7.83e-09,27;UBERON:0003834,1.00e-08,5;UBERON:0001533,1.00e-08,5;UBERON:0002118,1.07e-08,5;UBERON:0003513,3.30e-08,7;UBERON:0003498,4.20e-08,5;UBERON:0005985,4.20e-08,5;UBERON:0000992,4.02e-07,13 | |||
|phase1_expression=0.726713517082227,0,0.422863212287913,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,13.3743854128627,6.90892916574983,16.7201413181362,0,0,0,0,0,0,116.893031200226,62.7704120581543,38.8449458581375,0.223915474239924,0,0,22.1005322944938,35.5203387067481,21.8325655069035,112.03079578854,195.304746810367,275.948376467537,500.584762640542,437.266326045175,642.285736377397,617.439514199284,885.604985877009,878.917897997278,100.144924636666,102.61271242175,188.543003449426,928.658529453318,1057.46114421573,1177.65898572183,36.2836430205388,56.4482151069218,42.6224750532694,424.866325352247,372.772092622079,460.888464256725,312.804588244645,392.155154651991,466.304449581885,121.685300029307,443.03799609304,431.971158856807,0.422510572623884,0,0,0.336985893439485,0.450530678524519,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,0,3.96513985737078,13.4522055115569,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,6.43924685624423,0,0,0,0,0,1.69592382577203,0.419499436209906,0.550236083880135,1.25396979922086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.379891534993739,19.3317403987299,5.73673241497627,0.354668382198357,1.68203280042692,8.5399196583764,4.19334832309172,0,0.538842688278752,1.9615428373615,0,0,0,0.624320153660641,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70148274740032,0,0.213557388818567,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404493924480493,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,1.85194205030644,0,0,0,0.492434012174795,2.10603838625314,0.743155811443641,0,0,0,0,0,0,1.97065295158377,0,3.10992173311158,0.432359860250884,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.904318131178758,0,0.399891964728228,7.29742683847143,3.51579964002488,2.10833939483032,0.479249710983165,0,0,0.434343920002738,0,0.179060963239896,0,2.1673383622212,0.215627574859517,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,7.76571122947021,36.7142798843849,0,0,0,0,0.61384789315225,0,0.896974044789907,0,0.804269605718038,1.48418066444991,0.308419387605311,1.59805552781814,1.64254312027618,0.519254429183621,1.97557643381931,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,7.870308670766,2.0911118104818,5.23657086299351,5.32306030317022,6.08953094452551,7.04232032594896,9.01686786474545,0,0,0,0.255897791311334,0,2.22742273548156,8.63443504219153,0,0,0,3.841467149893,7.92551605865041,5.05510147486777,0,1.70599442741899,6.33900880540533,0,0,2.26016233240486,24.8114404595756,15.9225354057893,7.0152141640602,0,0,5.68149055495571,2.16876448669825,0.281695602532241,0,0,4.280052617775,0,2.9555068941673,0,0,0,0,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0.409074730008619,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07643550786903,0,0,0,1.5950057986596,0,3.19820865611181,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0,2.15361907373044,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,13.9284351820431,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,0.5013797880454,2.75711019087115,2.62298104567844,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,1.34329322598187,1.16856654923612,0,21.0237335855349,0.754703705257725,0,17.6206852665631,9.07385542579434,16.6317804623575,12.12412229915,4.61960624774737,2.24901556081802,0.465788870628778,3.31764966272684,1.59505028734797,2.60872530905867,1.95334891696384,4.18885733385675,5.2893195316606,20.3670498306867,3.22231671127465,8.81664143769138,3.98095888698616,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0.983091635014877,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr3:194299051..194299068,+ | |short_description=p@chr3:194299051..194299068,+ | ||
}} | }} |
Latest revision as of 19:40, 29 July 2015
Short description: | p@chr3:194299051..194299068, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:194299051..194299068, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.15e-14 | 14 |
female reproductive organ cancer | 3.15e-07 | 27 |