FFCP PHASE1:Hg19::chr5:172195926..172195937,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:172195926..172195937,- to FFCP PHASE1:Hg19::chr5:172195926..172195937,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-269bp_to_AJ227912_5end | |||
|cluster_id=chr5:172195926..172195937,- | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_13_at_AJ227912_5end | |||
|id=chr5:172195926..172195937,- | |||
|ontology_enrichment_celltype=CL:0002057!5.22e-23!42;CL:0000860!1.71e-20!45;CL:0000766!7.47e-14!76;CL:0000557!2.73e-12!71;CL:0002009!2.20e-11!65;CL:0000839!5.20e-11!70;CL:0002194!1.86e-10!63;CL:0000576!1.86e-10!63;CL:0000040!1.86e-10!63;CL:0000559!1.86e-10!63;CL:0000738!3.75e-10!140;CL:0002031!6.94e-09!124;CL:0002393!1.42e-08!9;CL:0002397!1.42e-08!9;CL:0002087!6.11e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.98e-19;3!CL:0000766;3.64e-16;69!CL:0000860;1.40e-13;33!CL:0002057;1.40e-13;33!CL:0000094;1.64e-12;8!CL:0000097;6.52e-12;5!CL:0000473;6.39e-11;39!CL:0000234;6.39e-11;39!CL:0000081;4.00e-09;11!CL:0000576;8.22e-09;48!CL:0000763;4.33e-07;100!CL:0000163;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.12e-25,72;CL:0000775,1.88e-19,3;CL:0000738,4.74e-18,136;CL:0000860,1.10e-17,42;CL:0002057,1.10e-17,42;CL:0000839,9.27e-17,66;CL:0000557,1.82e-16,67;CL:0000763,1.11e-15,108;CL:0000049,1.11e-15,108;CL:0000473,3.45e-15,48;CL:0000234,3.45e-15,48;CL:0002032,1.58e-14,161;CL:0000837,1.58e-14,161;CL:0000037,9.92e-14,168;CL:0002031,1.67e-13,120;CL:0000988,8.53e-13,177;CL:0000094,2.06e-12,8;CL:0000097,6.31e-12,5;CL:0002028,6.31e-12,5;CL:0002194,1.08e-11,59;CL:0000576,1.08e-11,59;CL:0000040,1.08e-11,59;CL:0000559,1.08e-11,59;CL:0002009,3.05e-11,61;CL:0002087,1.74e-09,115;CL:0000081,4.70e-09,11;CL:0000163,8.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-11;42!UBERON:0000358;1.49e-07;1!UBERON:0005754;1.49e-07;1!UBERON:0003099;3.72e-07;1!UBERON:0003852;3.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.06e-09!80;UBERON:0002390!1.15e-08!102;UBERON:0003061!1.15e-08!102;UBERON:0001474!1.24e-08!86;UBERON:0004765!9.24e-08!101;UBERON:0001434!9.24e-08!101;UBERON:0002193!4.87e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.49e-07;1!UBERON:0006868;1.49e-07;1!UBERON:0002171;3.72e-07;1!UBERON:0005705;3.72e-07;1!UBERON:0008193;3.72e-07;1!UBERON:0010912;3.72e-07;1!UBERON:0006518;3.72e-07;1!UBERON:0008949;3.72e-07;1!UBERON:0002514;3.72e-07;1!UBERON:0003457;3.72e-07;1!UBERON:0008907;3.72e-07;1!UBERON:0008001;3.72e-07;1!UBERON:0007213;3.72e-07;1!UBERON:0009891;3.72e-07;1!UBERON:0007914;3.72e-07;1!UBERON:0007375;3.72e-07;1!UBERON:0003323;3.72e-07;1!UBERON:0010258;3.72e-07;1!UBERON:0000101;3.72e-07;1!UBERON:0005253;3.72e-07;1!UBERON:0007842;3.72e-07;1!UBERON:0002167;3.72e-07;1!UBERON:0002397;3.72e-07;1!UBERON:0003113;3.72e-07;1!UBERON:0003277;3.72e-07;1!UBERON:0001709;3.72e-07;1!UBERON:0002244;3.72e-07;1!UBERON:0005620;3.72e-07;1!UBERON:0010364;3.72e-07;1!UBERON:0004288;3.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,6.91e-15,82;UBERON:0002371,3.51e-14,76;UBERON:0001434,2.35e-13,100;UBERON:0004765,2.75e-13,90;UBERON:0002405,4.60e-11,93;UBERON:0002390,2.37e-10,98;UBERON:0003061,2.37e-10,98;UBERON:0002193,3.99e-09,108;UBERON:0002204,1.22e-07,167;UBERON:0000998,1.54e-07,1;UBERON:0006868,1.54e-07,1;UBERON:0003081,1.84e-07,203;UBERON:0005705,3.21e-07,1;UBERON:0008193,3.21e-07,1;UBERON:0010912,3.21e-07,1;UBERON:0002514,3.21e-07,1;UBERON:0003457,3.21e-07,1;UBERON:0008907,3.21e-07,1;UBERON:0008001,3.21e-07,1;UBERON:0007213,3.21e-07,1;UBERON:0009891,3.21e-07,1;UBERON:0007914,3.21e-07,1;UBERON:0009292,3.21e-07,1;UBERON:0003099,3.21e-07,1;UBERON:0007375,3.21e-07,1;UBERON:0003323,3.21e-07,1;UBERON:0010258,3.21e-07,1;UBERON:0007842,3.21e-07,1;UBERON:0009494,3.21e-07,1;UBERON:0010042,3.21e-07,1;UBERON:0010045,3.21e-07,1;UBERON:0010259,3.21e-07,1;UBERON:0010359,3.21e-07,1;UBERON:0009526,3.21e-07,1;UBERON:0002397,3.21e-07,1;UBERON:0003113,3.21e-07,1;UBERON:0003277,3.21e-07,1;UBERON:0001709,3.21e-07,1;UBERON:0004066,3.21e-07,1;UBERON:0002244,3.21e-07,1;UBERON:0005620,3.21e-07,1;UBERON:0004362,3.21e-07,1;UBERON:0010364,3.21e-07,1;UBERON:0010046,3.21e-07,1;UBERON:0005868,3.21e-07,1;UBERON:0007238,3.21e-07,1;UBERON:0004288,3.21e-07,1;UBERON:0004068,3.21e-07,1;UBERON:0010334,3.21e-07,1;UBERON:0003852,3.21e-07,1;UBERON:0010253,3.21e-07,1;UBERON:0002171,4.60e-07,1;UBERON:0006518,4.60e-07,1;UBERON:0008949,4.60e-07,1;UBERON:0000101,4.60e-07,1;UBERON:0002167,4.60e-07,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.08371286321253,0,0,0,0,0,0,0.553995408531877,1.60435557976113,1.08505435357926,0,0,0,0.290796477559129,0,0,0.697287110717054,0,0.309706370895104,0.575384784644301,0.768482119587302,0.47296445977717,1.72372840368309,1.29096936716765,0,1.12945403725563,0.272906150057846,0.449446968890169,1.53041946185451,0.962787081228281,2.55734850319616,0.329851300186716,0.598390972864896,0,1.16083695451434,0.56738522469114,1.86846674698672,1.00499466102697,0.521482918420201,0.217188844705117,0,0.368277635987565,1.58231193720442,0.211255286311942,0.850417199860174,0.838634582033504,0.673971786878971,1.35159203557356,0.48217676009124,0.570025487482497,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0.393419540227666,0.786021525498329,0.822405995998037,0,0,0,3.89653456815823,0,0.294605907474837,0.221533894583621,0.541607727530031,0,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0,0.34362744548263,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,1.00803371612366,1.60464117470104,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0.427114777637135,0.211931901159562,0,0,0.772921620136887,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,2.90259361757081,3.17063897517315,4.79721247020244,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.591092280605782,1.07813787429759,0.77005821767849,0,0,0,0,0,2.99602809578873,5.9832291840805,2.48649308061621,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.862856803274467,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0.532685175939381,0.246381468041427,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,1.39453664789186,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,1.68886108238131,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0.47748896947538,0,0.614321404198464,0,0,0.222617410045812,0,0,1.79323189425963,0.276283915531148,0,0.102268682502155,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0.461701551022782,0,0,0,0,0.957003479195758,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.252746318513952,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0.195551382734803,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0.171086837884329,0,0.747511887973863,0.157204305099666,1.24271716604159,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.453692771289717,0,0.147855149989634,0,0,0.155262956876259,0,0.265841714557995,0,0.601030435988874,0,0,0,0.322231671127465,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.926404341482917,0.219284049578707,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0.59996218756479,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0.327543835020193,0,0.0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| ||
|short_description=p13@AJ227912 | |||
}} | }} |
Latest revision as of 13:06, 30 July 2015
Short description: | p13@AJ227912 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_AJ227912_5end |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | -269bp_to_AJ227912_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.12e-25 | 72 |
neutrophil | 1.88e-19 | 3 |
leukocyte | 4.74e-18 | 136 |
classical monocyte | 1.10e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-17 | 42 |
myeloid lineage restricted progenitor cell | 9.27e-17 | 66 |
granulocyte monocyte progenitor cell | 1.82e-16 | 67 |
myeloid cell | 1.11e-15 | 108 |
common myeloid progenitor | 1.11e-15 | 108 |
defensive cell | 3.45e-15 | 48 |
phagocyte | 3.45e-15 | 48 |
hematopoietic oligopotent progenitor cell | 1.58e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-14 | 161 |
hematopoietic stem cell | 9.92e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 1.67e-13 | 120 |
hematopoietic cell | 8.53e-13 | 177 |
granulocyte | 2.06e-12 | 8 |
mast cell | 6.31e-12 | 5 |
basophil mast progenitor cell | 6.31e-12 | 5 |
monopoietic cell | 1.08e-11 | 59 |
monocyte | 1.08e-11 | 59 |
monoblast | 1.08e-11 | 59 |
promonocyte | 1.08e-11 | 59 |
macrophage dendritic cell progenitor | 3.05e-11 | 61 |
nongranular leukocyte | 1.74e-09 | 115 |
blood cell | 4.70e-09 | 11 |
endocrine cell | 8.23e-07 | 9 |