FFCP PHASE1:Hg19::chr5:71479431..71479458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:71479431..71479458,+ | |||
|coexpression_cluster_id=C545 | |coexpression_cluster_id=C545 | ||
|description=CAGE_peak_at_chr5:71479431..71479458,+ | |description=CAGE_peak_at_chr5:71479431..71479458,+ | ||
|id=chr5:71479431..71479458,+ | |id=chr5:71479431..71479458,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.36e-21!7;CL:0000126!1.36e-21!7;CL:0000127!1.36e-21!7;CL:0002453!1.36e-21!7;CL:0002319!4.12e-17!25;CL:0002605!3.80e-14!3;CL:0000047!1.40e-13!8;CL:0002603!6.28e-13!3;CL:0000133!6.33e-09!59;CL:0000243!1.73e-08!15;CL:0000125!1.73e-08!15;CL:0000030!1.73e-08!15;CL:0000339!1.73e-08!15;CL:0000095!1.60e-07!17;CL:0000123!1.60e-07!17;CL:0000540!3.74e-07!6;CL:0000031!3.74e-07!6;CL:0000404!3.74e-07!6;CL:0000221!5.24e-07!71 | |ontology_enrichment_celltype=CL:0000128!1.36e-21!7;CL:0000126!1.36e-21!7;CL:0000127!1.36e-21!7;CL:0002453!1.36e-21!7;CL:0002319!4.12e-17!25;CL:0002605!3.80e-14!3;CL:0000047!1.40e-13!8;CL:0002603!6.28e-13!3;CL:0000133!6.33e-09!59;CL:0000243!1.73e-08!15;CL:0000125!1.73e-08!15;CL:0000030!1.73e-08!15;CL:0000339!1.73e-08!15;CL:0000095!1.60e-07!17;CL:0000123!1.60e-07!17;CL:0000540!3.74e-07!6;CL:0000031!3.74e-07!6;CL:0000404!3.74e-07!6;CL:0000221!5.24e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002605;9.90e-35;3!CL:0002319;1.07e-25;25!CL:0000047;4.89e-23;2!CL:0000540;1.95e-17;6!CL:0000404;1.95e-17;6!CL:0000128;2.84e-15;7!CL:0000126;2.84e-15;7!CL:0000127;2.84e-15;7!CL:0000306;6.55e-12;4!CL:0002222;6.55e-12;4!CL:0002224;6.55e-12;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.90e-35,3;CL:0000047,1.13e-34,8;CL:0002319,1.05e-25,25;CL:0000540,2.01e-17,6;CL:0000031,2.01e-17,6;CL:0000404,2.01e-17,6;CL:0000128,2.84e-15,7;CL:0000126,2.84e-15,7;CL:0000127,2.84e-15,7;CL:0002453,2.84e-15,7;CL:0000133,9.62e-14,59;CL:0000306,6.73e-12,4;CL:0002222,6.73e-12,4;CL:0002224,6.73e-12,4;CL:0000221,3.93e-11,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.95e-17;6!CL:0000133;5.73e-10;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.72e-58!82;UBERON:0005743!3.96e-55!86;UBERON:0001049!1.93e-51!57;UBERON:0005068!1.93e-51!57;UBERON:0006241!1.93e-51!57;UBERON:0007135!1.93e-51!57;UBERON:0002616!1.72e-49!59;UBERON:0000073!3.15e-49!94;UBERON:0001016!3.15e-49!94;UBERON:0000955!3.95e-47!69;UBERON:0006238!3.95e-47!69;UBERON:0003075!7.34e-46!86;UBERON:0007284!7.34e-46!86;UBERON:0002346!1.71e-43!90;UBERON:0002780!2.78e-41!41;UBERON:0001890!2.78e-41!41;UBERON:0006240!2.78e-41!41;UBERON:0003080!3.40e-40!42;UBERON:0003056!5.76e-38!61;UBERON:0004121!5.31e-33!169;UBERON:0000924!4.81e-32!173;UBERON:0006601!4.81e-32!173;UBERON:0000033!1.56e-31!123;UBERON:0002791!1.68e-30!33;UBERON:0000153!1.02e-29!129;UBERON:0007811!1.02e-29!129;UBERON:0001893!1.64e-29!34;UBERON:0001869!5.85e-28!32;UBERON:0002020!3.85e-26!34;UBERON:0003528!3.85e-26!34;UBERON:0000956!5.43e-17!25;UBERON:0000203!5.43e-17!25;UBERON:0000369!2.71e-16!4;UBERON:0002435!2.71e-16!4;UBERON:0000204!2.71e-16!4;UBERON:0010082!2.71e-16!4;UBERON:0002420!1.86e-15!9;UBERON:0007245!1.86e-15!9;UBERON:0010009!1.86e-15!9;UBERON:0010011!1.86e-15!9;UBERON:0000454!1.86e-15!9;UBERON:0004733!2.52e-15!12;UBERON:0002028!2.52e-15!12;UBERON:0007277!2.52e-15!12;UBERON:0009663!3.27e-14!7;UBERON:0001894!3.36e-14!7;UBERON:0006222!3.36e-14!7;UBERON:0004732!4.50e-14!13;UBERON:0005383!7.39e-13!3;UBERON:0005382!7.39e-13!3;UBERON:0000025!1.75e-12!194;UBERON:0001896!2.02e-12!3;UBERON:0005290!2.02e-12!3;UBERON:0010096!2.02e-12!3;UBERON:0007023!2.03e-12!115;UBERON:0003076!4.52e-12!15;UBERON:0003057!4.52e-12!15;UBERON:0002308!5.39e-11!9;UBERON:0000125!5.39e-11!9;UBERON:0000483!2.50e-10!309;UBERON:0000119!3.78e-10!312;UBERON:0002619!6.33e-10!22;UBERON:0003296!7.52e-10!4;UBERON:0010133!7.52e-10!4;UBERON:0000007!2.53e-09!2;UBERON:0001873!3.25e-09!2;UBERON:0010122!3.25e-09!2;UBERON:0004111!1.05e-08!241;UBERON:0001950!1.60e-08!20;UBERON:0000475!4.06e-08!365;UBERON:0002298!6.18e-08!8;UBERON:0000064!7.51e-08!219;UBERON:0000477!1.22e-07!286;UBERON:0000349!1.84e-07!5;UBERON:0002680!2.84e-07!9;UBERON:0001895!2.84e-07!9;UBERON:0010092!2.84e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!3.72e-58!82;UBERON:0005743!3.96e-55!86;UBERON:0001049!1.93e-51!57;UBERON:0005068!1.93e-51!57;UBERON:0006241!1.93e-51!57;UBERON:0007135!1.93e-51!57;UBERON:0002616!1.72e-49!59;UBERON:0000073!3.15e-49!94;UBERON:0001016!3.15e-49!94;UBERON:0000955!3.95e-47!69;UBERON:0006238!3.95e-47!69;UBERON:0003075!7.34e-46!86;UBERON:0007284!7.34e-46!86;UBERON:0002346!1.71e-43!90;UBERON:0002780!2.78e-41!41;UBERON:0001890!2.78e-41!41;UBERON:0006240!2.78e-41!41;UBERON:0003080!3.40e-40!42;UBERON:0003056!5.76e-38!61;UBERON:0004121!5.31e-33!169;UBERON:0000924!4.81e-32!173;UBERON:0006601!4.81e-32!173;UBERON:0000033!1.56e-31!123;UBERON:0002791!1.68e-30!33;UBERON:0000153!1.02e-29!129;UBERON:0007811!1.02e-29!129;UBERON:0001893!1.64e-29!34;UBERON:0001869!5.85e-28!32;UBERON:0002020!3.85e-26!34;UBERON:0003528!3.85e-26!34;UBERON:0000956!5.43e-17!25;UBERON:0000203!5.43e-17!25;UBERON:0000369!2.71e-16!4;UBERON:0002435!2.71e-16!4;UBERON:0000204!2.71e-16!4;UBERON:0010082!2.71e-16!4;UBERON:0002420!1.86e-15!9;UBERON:0007245!1.86e-15!9;UBERON:0010009!1.86e-15!9;UBERON:0010011!1.86e-15!9;UBERON:0000454!1.86e-15!9;UBERON:0004733!2.52e-15!12;UBERON:0002028!2.52e-15!12;UBERON:0007277!2.52e-15!12;UBERON:0009663!3.27e-14!7;UBERON:0001894!3.36e-14!7;UBERON:0006222!3.36e-14!7;UBERON:0004732!4.50e-14!13;UBERON:0005383!7.39e-13!3;UBERON:0005382!7.39e-13!3;UBERON:0000025!1.75e-12!194;UBERON:0001896!2.02e-12!3;UBERON:0005290!2.02e-12!3;UBERON:0010096!2.02e-12!3;UBERON:0007023!2.03e-12!115;UBERON:0003076!4.52e-12!15;UBERON:0003057!4.52e-12!15;UBERON:0002308!5.39e-11!9;UBERON:0000125!5.39e-11!9;UBERON:0000483!2.50e-10!309;UBERON:0000119!3.78e-10!312;UBERON:0002619!6.33e-10!22;UBERON:0003296!7.52e-10!4;UBERON:0010133!7.52e-10!4;UBERON:0000007!2.53e-09!2;UBERON:0001873!3.25e-09!2;UBERON:0010122!3.25e-09!2;UBERON:0004111!1.05e-08!241;UBERON:0001950!1.60e-08!20;UBERON:0000475!4.06e-08!365;UBERON:0002298!6.18e-08!8;UBERON:0000064!7.51e-08!219;UBERON:0000477!1.22e-07!286;UBERON:0000349!1.84e-07!5;UBERON:0002680!2.84e-07!9;UBERON:0001895!2.84e-07!9;UBERON:0010092!2.84e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.05e-15;25!UBERON:0000203;3.05e-15;25!UBERON:0010077;6.55e-12;4!UBERON:0005389;6.55e-12;4!UBERON:0000484;6.55e-12;4!UBERON:0000965;6.55e-12;4!UBERON:0001803;6.55e-12;4!UBERON:0002791;1.07e-11;32!UBERON:0001869;1.27e-11;32!UBERON:0003528;6.14e-11;34!UBERON:0002020;6.14e-11;34!UBERON:0001893;4.18e-10;34!UBERON:0002780;4.42e-10;41!UBERON:0001890;4.42e-10;41!UBERON:0007625;1.60e-09;11!UBERON:0000073;8.58e-08;53!UBERON:0002616;8.58e-08;53!UBERON:0001801;1.37e-07;14!UBERON:0001016;2.40e-07;83!UBERON:0000955;3.46e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.12e-21,81;UBERON:0001016,1.32e-18,89;UBERON:0003056,1.48e-16,61;UBERON:0000956,3.05e-15,25;UBERON:0000203,3.05e-15,25;UBERON:0004121,3.52e-14,171;UBERON:0000924,3.52e-14,171;UBERON:0006601,3.52e-14,171;UBERON:0002780,2.06e-12,41;UBERON:0001890,2.06e-12,41;UBERON:0003080,2.06e-12,41;UBERON:0006240,2.06e-12,41;UBERON:0003075,4.90e-12,82;UBERON:0007284,4.90e-12,82;UBERON:0002791,6.21e-12,32;UBERON:0001869,6.21e-12,32;UBERON:0010077,6.73e-12,4;UBERON:0005389,6.73e-12,4;UBERON:0000484,6.73e-12,4;UBERON:0002546,6.73e-12,4;UBERON:0000965,6.73e-12,4;UBERON:0001803,6.73e-12,4;UBERON:0003073,6.73e-12,4;UBERON:0005426,6.73e-12,4;UBERON:0002346,2.02e-11,86;UBERON:0003528,3.14e-11,34;UBERON:0002020,3.14e-11,34;UBERON:0001893,3.14e-11,34;UBERON:0007625,1.60e-09,11;UBERON:0000073,1.65e-09,53;UBERON:0002616,1.65e-09,53;UBERON:0000955,2.75e-09,68;UBERON:0006238,2.75e-09,68;UBERON:0010371,3.12e-09,104;UBERON:0001049,5.66e-09,56;UBERON:0005068,5.66e-09,56;UBERON:0006241,5.66e-09,56;UBERON:0007135,5.66e-09,56;UBERON:0011216,1.29e-07,223;UBERON:0001801,1.37e-07,14;UBERON:0010314,5.33e-07,132 | |||
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|short_description=p@chr5:71479431..71479458,+ | |short_description=p@chr5:71479431..71479458,+ | ||
}} | }} |
Latest revision as of 16:02, 30 July 2015
Short description: | p@chr5:71479431..71479458, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:71479431..71479458, + |
Coexpression cluster: | C545_Astrocyte_Neural_Neurons_parietal_neuroectodermal_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.90e-35 | 3 |
neuronal stem cell | 1.13e-34 | 8 |
neural cell | 1.05e-25 | 25 |
neuron | 2.01e-17 | 6 |
neuroblast | 2.01e-17 | 6 |
electrically signaling cell | 2.01e-17 | 6 |
oligodendrocyte | 2.84e-15 | 7 |
macroglial cell | 2.84e-15 | 7 |
astrocyte | 2.84e-15 | 7 |
oligodendrocyte precursor cell | 2.84e-15 | 7 |
neurectodermal cell | 9.62e-14 | 59 |
crystallin accumulating cell | 6.73e-12 | 4 |
vertebrate lens cell | 6.73e-12 | 4 |
lens epithelial cell | 6.73e-12 | 4 |
ectodermal cell | 3.93e-11 | 72 |