FFCP PHASE1:Hg19::chr6:152712662..152712705,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:152712662..152712705,- | |||
|description=CAGE_peak_at_chr6:152712662..152712705,- | |description=CAGE_peak_at_chr6:152712662..152712705,- | ||
|id=chr6:152712662..152712705,- | |id=chr6:152712662..152712705,- | ||
|ontology_enrichment_celltype=CL:0002580;1.09e-13;3!CL:0002616;4.15e-11;1!CL:0002334;9.86e-08;12 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002580;1.09e-13;3!CL:0002616;4.15e-11;1!CL:0002334;9.86e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.24e-13,3;CL:0002616,4.15e-11,1;CL:0002334,1.01e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.06e-13;3!UBERON:0003057;2.06e-13;3!UBERON:0003099;5.56e-11;1!UBERON:0003852;5.56e-11;1!UBERON:0010227;1.10e-10;1!UBERON:0005425;1.10e-10;1!UBERON:0005062;1.21e-10;4!UBERON:0007284;1.21e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002240;2.06e-13;3!UBERON:0005174;2.06e-13;3!UBERON:0001137;2.06e-13;3!UBERON:0002146;4.15e-11;1!UBERON:0005623;4.15e-11;1!UBERON:0005705;5.56e-11;1!UBERON:0008193;5.56e-11;1!UBERON:0010912;5.56e-11;1!UBERON:0002514;5.56e-11;1!UBERON:0003457;5.56e-11;1!UBERON:0008907;5.56e-11;1!UBERON:0008001;5.56e-11;1!UBERON:0007213;5.56e-11;1!UBERON:0009891;5.56e-11;1!UBERON:0007914;5.56e-11;1!UBERON:0007375;5.56e-11;1!UBERON:0003323;5.56e-11;1!UBERON:0010258;5.56e-11;1!UBERON:0005253;5.56e-11;1!UBERON:0007842;5.56e-11;1!UBERON:0002397;5.56e-11;1!UBERON:0003113;5.56e-11;1!UBERON:0003277;5.56e-11;1!UBERON:0001709;5.56e-11;1!UBERON:0002244;5.56e-11;1!UBERON:0005620;5.56e-11;1!UBERON:0010364;5.56e-11;1!UBERON:0004288;5.56e-11;1!UBERON:0002079;1.10e-10;1!UBERON:0000941;1.10e-10;1!UBERON:0002171;1.10e-10;1!UBERON:0001785;1.10e-10;1!UBERON:0002464;1.10e-10;1!UBERON:0004904;1.10e-10;1!UBERON:0001021;1.10e-10;1!UBERON:0006518;1.10e-10;1!UBERON:0008949;1.10e-10;1!UBERON:0000101;1.10e-10;1!UBERON:0002167;1.10e-10;1!UBERON:0003688;3.05e-07;6!UBERON:0002358;3.05e-07;6!UBERON:0003684;3.05e-07;6!UBERON:0001178;3.05e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.36e-20!115;UBERON:0001049!2.03e-16!57;UBERON:0005068!2.03e-16!57;UBERON:0006241!2.03e-16!57;UBERON:0007135!2.03e-16!57;UBERON:0003075!6.22e-15!86;UBERON:0007284!6.22e-15!86;UBERON:0002346!9.83e-15!90;UBERON:0001017!1.82e-13!82;UBERON:0005743!2.29e-13!86;UBERON:0000073!4.77e-13!94;UBERON:0001016!4.77e-13!94;UBERON:0002616!8.07e-13!59;UBERON:0000955!1.68e-12!69;UBERON:0006238!1.68e-12!69;UBERON:0002780!8.14e-11!41;UBERON:0001890!8.14e-11!41;UBERON:0006240!8.14e-11!41;UBERON:0003080!1.96e-10!42;UBERON:0001893!9.19e-10!34;UBERON:0002791!6.95e-09!33;UBERON:0002020!2.27e-08!34;UBERON:0003528!2.27e-08!34;UBERON:0001869!5.48e-08!32;UBERON:0003076!1.12e-07!15;UBERON:0003057!1.12e-07!15;UBERON:0003056!3.03e-07!61;UBERON:0004732!4.38e-07!13;UBERON:0003688!6.00e-07!6;UBERON:0002358!6.00e-07!6;UBERON:0003684!6.00e-07!6;UBERON:0001178!6.00e-07!6;UBERON:0000153!6.58e-07!129;UBERON:0007811!6.58e-07!129;UBERON:0002298!7.60e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.06e-13;3!UBERON:0005174;2.06e-13;3!UBERON:0001137;2.06e-13;3!UBERON:0002146;4.15e-11;1!UBERON:0005623;4.15e-11;1!UBERON:0005705;5.56e-11;1!UBERON:0008193;5.56e-11;1!UBERON:0010912;5.56e-11;1!UBERON:0002514;5.56e-11;1!UBERON:0003457;5.56e-11;1!UBERON:0008907;5.56e-11;1!UBERON:0008001;5.56e-11;1!UBERON:0007213;5.56e-11;1!UBERON:0009891;5.56e-11;1!UBERON:0007914;5.56e-11;1!UBERON:0007375;5.56e-11;1!UBERON:0003323;5.56e-11;1!UBERON:0010258;5.56e-11;1!UBERON:0005253;5.56e-11;1!UBERON:0007842;5.56e-11;1!UBERON:0002397;5.56e-11;1!UBERON:0003113;5.56e-11;1!UBERON:0003277;5.56e-11;1!UBERON:0001709;5.56e-11;1!UBERON:0002244;5.56e-11;1!UBERON:0005620;5.56e-11;1!UBERON:0010364;5.56e-11;1!UBERON:0004288;5.56e-11;1!UBERON:0002079;1.10e-10;1!UBERON:0000941;1.10e-10;1!UBERON:0002171;1.10e-10;1!UBERON:0001785;1.10e-10;1!UBERON:0002464;1.10e-10;1!UBERON:0004904;1.10e-10;1!UBERON:0001021;1.10e-10;1!UBERON:0006518;1.10e-10;1!UBERON:0008949;1.10e-10;1!UBERON:0000101;1.10e-10;1!UBERON:0002167;1.10e-10;1!UBERON:0003688;3.05e-07;6!UBERON:0002358;3.05e-07;6!UBERON:0003684;3.05e-07;6!UBERON:0001178;3.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.34e-13,3;UBERON:0005174,2.34e-13,3;UBERON:0001137,2.34e-13,3;UBERON:0002146,3.76e-11,1;UBERON:0005623,3.76e-11,1;UBERON:0005705,5.57e-11,1;UBERON:0008193,5.57e-11,1;UBERON:0010912,5.57e-11,1;UBERON:0002514,5.57e-11,1;UBERON:0003457,5.57e-11,1;UBERON:0008907,5.57e-11,1;UBERON:0008001,5.57e-11,1;UBERON:0007213,5.57e-11,1;UBERON:0009891,5.57e-11,1;UBERON:0007914,5.57e-11,1;UBERON:0009292,5.57e-11,1;UBERON:0003099,5.57e-11,1;UBERON:0007375,5.57e-11,1;UBERON:0003323,5.57e-11,1;UBERON:0010258,5.57e-11,1;UBERON:0007842,5.57e-11,1;UBERON:0009494,5.57e-11,1;UBERON:0010042,5.57e-11,1;UBERON:0010045,5.57e-11,1;UBERON:0010259,5.57e-11,1;UBERON:0010359,5.57e-11,1;UBERON:0009526,5.57e-11,1;UBERON:0002397,5.57e-11,1;UBERON:0003113,5.57e-11,1;UBERON:0003277,5.57e-11,1;UBERON:0001709,5.57e-11,1;UBERON:0004066,5.57e-11,1;UBERON:0002244,5.57e-11,1;UBERON:0005620,5.57e-11,1;UBERON:0004362,5.57e-11,1;UBERON:0010364,5.57e-11,1;UBERON:0010046,5.57e-11,1;UBERON:0005868,5.57e-11,1;UBERON:0007238,5.57e-11,1;UBERON:0004288,5.57e-11,1;UBERON:0004068,5.57e-11,1;UBERON:0010334,5.57e-11,1;UBERON:0003852,5.57e-11,1;UBERON:0010253,5.57e-11,1;UBERON:0002171,7.46e-11,1;UBERON:0006518,7.46e-11,1;UBERON:0008949,7.46e-11,1;UBERON:0000101,7.46e-11,1;UBERON:0002167,7.46e-11,1;UBERON:0002079,8.22e-11,1;UBERON:0000941,9.05e-11,1;UBERON:0001785,9.05e-11,1;UBERON:0002464,9.05e-11,1;UBERON:0004904,9.05e-11,1;UBERON:0001021,9.05e-11,1;UBERON:0003902,9.05e-11,1;UBERON:0005425,9.05e-11,1;UBERON:0003688,2.96e-07,6;UBERON:0002358,2.96e-07,6;UBERON:0003684,2.96e-07,6;UBERON:0001178,2.96e-07,6;UBERON:0007023,6.34e-07,114 | |||
|phase1_expression=0,0,0.140954404095971,0,1.34088328328186,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,2.00535164254356,0.434539556882471,0.795285947051099,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0.289562613335158,0,0,0.112085143993527,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0,0,0,0,1.24053903909388,3.22270143904931,0.561320188866147,0.128139149255701,0.511707249066704,2.57366273829772,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,1.14499909393593,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,10.1616474008046,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.995213339381022,0.295547618953547,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.404406797884062,0.802577647298789,0.702793337176017,0,0,0,0,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0.279282401272254,3.66656678418694,0,0,0.429226048136571,0,0.335917362433631,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,5.20117668174708,4.82582210841983,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.776503360757966,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,2.46873160583479,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0,0.807378228159255,1.42769420259154,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,5.47059807863165,0,0,0,0.337687923091973,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,1.18818560130834,0,0.679708458751268,0.0939839179798536,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,0.924351257262837,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,1.34088328328186,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,2.00535164254356,0.434539556882471,0.795285947051099,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0.289562613335158,0,0,0.112085143993527,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0,0,0,0,1.24053903909388,3.22270143904931,0.561320188866147,0.128139149255701,0.511707249066704,2.57366273829772,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,1.14499909393593,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,10.1616474008046,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.995213339381022,0.295547618953547,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.404406797884062,0.802577647298789,0.702793337176017,0,0,0,0,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0.279282401272254,3.66656678418694,0,0,0.429226048136571,0,0.335917362433631,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,5.20117668174708,4.82582210841983,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.776503360757966,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,2.46873160583479,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0,0.807378228159255,1.42769420259154,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,5.47059807863165,0,0,0,0.337687923091973,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,1.18818560130834,0,0.679708458751268,0.0939839179798536,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,0.924351257262837,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr6:152712662..152712705,- | |short_description=p@chr6:152712662..152712705,- | ||
}} | }} |
Latest revision as of 21:04, 30 July 2015
Short description: | p@chr6:152712662..152712705, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:152712662..152712705, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.24e-13 | 3 |
perirenal adipocyte cell | 4.15e-11 | 1 |
preadipocyte | 1.01e-07 | 12 |