FFCP PHASE1:Hg19::chr6:3224908..3224938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:3224908..3224938,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_at_chr6:3224908..3224938,- | |description=CAGE_peak_at_chr6:3224908..3224938,- | ||
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|ontology_enrichment_celltype=CL:0002319!3.72e-13!25;CL:0000047!3.17e-12!8;CL:0000133!1.16e-11!59;CL:0000540!9.67e-10!6;CL:0000031!9.67e-10!6;CL:0000404!9.67e-10!6;CL:0000221!2.65e-08!71;CL:0000128!4.56e-07!7;CL:0000126!4.56e-07!7;CL:0000127!4.56e-07!7;CL:0002453!4.56e-07!7 | |ontology_enrichment_celltype=CL:0002319!3.72e-13!25;CL:0000047!3.17e-12!8;CL:0000133!1.16e-11!59;CL:0000540!9.67e-10!6;CL:0000031!9.67e-10!6;CL:0000404!9.67e-10!6;CL:0000221!2.65e-08!71;CL:0000128!4.56e-07!7;CL:0000126!4.56e-07!7;CL:0000127!4.56e-07!7;CL:0002453!4.56e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.18e-22;25!CL:0000540;6.45e-22;6!CL:0000404;6.45e-22;6!CL:0002605;9.36e-11;3!CL:0000047;5.19e-08;2!CL:0000123;6.29e-08;2!CL:0000242;6.29e-08;2!CL:0000128;7.91e-08;7!CL:0000126;7.91e-08;7!CL:0000127;7.91e-08;7 | |ontology_enrichment_celltype_v019=CL:0002319;2.18e-22;25!CL:0000540;6.45e-22;6!CL:0000404;6.45e-22;6!CL:0002605;9.36e-11;3!CL:0000047;5.19e-08;2!CL:0000123;6.29e-08;2!CL:0000242;6.29e-08;2!CL:0000128;7.91e-08;7!CL:0000126;7.91e-08;7!CL:0000127;7.91e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.61e-28,8;CL:0002319,2.18e-22,25;CL:0000540,7.17e-22,6;CL:0000031,7.17e-22,6;CL:0000404,7.17e-22,6;CL:0000133,1.05e-15,59;CL:0000221,4.01e-12,72;CL:0002605,8.10e-11,3;CL:0000242,6.32e-08,2;CL:0000128,6.61e-08,7;CL:0000126,6.61e-08,7;CL:0000127,6.61e-08,7;CL:0002453,6.61e-08,7 | |||
|ontology_enrichment_development_v019=CL:0000031;6.45e-22;6!UBERON:0006241;1.29e-11;3!UBERON:0003057;1.29e-11;3!CL:0000133;2.09e-09;59 | |ontology_enrichment_development_v019=CL:0000031;6.45e-22;6!UBERON:0006241;1.29e-11;3!UBERON:0003057;1.29e-11;3!CL:0000133;2.09e-09;59 | ||
|ontology_enrichment_disease=DOID:3095!4.19e-08!22;DOID:2994!4.19e-08!22 | |ontology_enrichment_disease=DOID:3095!4.19e-08!22;DOID:2994!4.19e-08!22 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr6:3224908..3224938,- | |short_description=p@chr6:3224908..3224938,- | ||
}} | }} |
Latest revision as of 00:21, 31 July 2015
Short description: | p@chr6:3224908..3224938, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:3224908..3224938, - |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.61e-28 | 8 |
neural cell | 2.18e-22 | 25 |
neuron | 7.17e-22 | 6 |
neuroblast | 7.17e-22 | 6 |
electrically signaling cell | 7.17e-22 | 6 |
neurectodermal cell | 1.05e-15 | 59 |
ectodermal cell | 4.01e-12 | 72 |
astrocyte of the cerebral cortex | 8.10e-11 | 3 |
Merkel cell | 6.32e-08 | 2 |
oligodendrocyte | 6.61e-08 | 7 |
macroglial cell | 6.61e-08 | 7 |
astrocyte | 6.61e-08 | 7 |
oligodendrocyte precursor cell | 6.61e-08 | 7 |