FFCP PHASE1:Mm9::chr7:126328112..126328133,-: Difference between revisions
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{{FFCP|EntrezGene=209776|HGNC=|MCL_coexpression_id=87|UniProt=Q80UC8|association_with_transcript=-224bp_to_ENSMUST00000084650,NM_001024138,uc009jky.1_5end|description=CAGE_peak_3_at_Gpr139_5end|id=chr7:126328112..126328133,-|ontology_enrichment_celltype=CL:0000117!1.00e-26!23;CL:0000337!1.00e-26!23;CL:0000540!1.60e-16!33;CL:0000047!1.60e-16!33;CL:0000031!1.60e-16!33;CL:0000404!1.60e-16!33;CL:0000393!5.86e-13!39;CL:0000211!5.86e-13!39;CL:0002319!3.40e-12!43;CL:0000221!9.12e-12!44;CL:0000133!9.12e-12!44;CL:0000055!1.42e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.03e-50,23;CL:0000337,2.03e-50,23;CL:0000540,1.77e-34,33;CL:0000047,1.77e-34,33;CL:0000031,1.77e-34,33;CL:0000404,1.77e-34,33;CL:0000393,7.93e-29,39;CL:0000211,7.93e-29,39;CL:0002319,6.21e-26,43;CL:0000221,2.72e-25,44;CL:0000133,2.72e-25,44;CL:0000120,1.54e-15,3;CL:0002612,2.98e-15,3;CL:0002321,5.11e-15,70;CL:0002613,6.38e-15,3;CL:0002614,1.22e-14,3;CL:0002610,2.07e-14,3;CL:0000723,5.54e-11,91;CL:0000048,5.54e-11,91;CL:0000034,3.79e-10,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.10e-16!75;UBERON:0001016!6.10e-16!75;UBERON:0001017!1.15e-15!73;UBERON:0005743!1.15e-15!73;UBERON:0001049!1.49e-15!52;UBERON:0005068!1.49e-15!52;UBERON:0006241!1.49e-15!52;UBERON:0007135!1.49e-15!52;UBERON:0002616!3.12e-14!49;UBERON:0000955!8.61e-14!50;UBERON:0006238!8.61e-14!50;UBERON:0002346!9.06e-13!71;UBERON:0003075!9.06e-13!71;UBERON:0007284!9.06e-13!71;UBERON:0002420!1.26e-12!8;UBERON:0007245!1.26e-12!8;UBERON:0010009!1.26e-12!8;UBERON:0010011!1.26e-12!8;UBERON:0000454!1.26e-12!8;UBERON:0004121!4.06e-12!102;UBERON:0000924!4.06e-12!102;UBERON:0006601!4.06e-12!102;UBERON:0000033!4.76e-12!63;UBERON:0002020!1.39e-10!34;UBERON:0003080!5.71e-10!40;UBERON:0003056!1.07e-09!49;UBERON:0002298!2.38e-09!6;UBERON:0002780!3.98e-09!39;UBERON:0001890!3.98e-09!39;UBERON:0006240!3.98e-09!39;UBERON:0000369!1.92e-08!5;UBERON:0002435!1.92e-08!5;UBERON:0000204!1.92e-08!5;UBERON:0010082!1.92e-08!5;UBERON:0002791!2.55e-07!29;UBERON:0003528!2.55e-07!29;UBERON:0001893!2.55e-07!29;UBERON:0002950!5.76e-07!4;UBERON:0001891!5.76e-07!4;UBERON:0009616!5.76e-07!4;UBERON:0003076!6.65e-07!12;UBERON:0003057!6.65e-07!12;UBERON:0007811!9.97e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002420,4.07e-28,8;UBERON:0007245,4.07e-28,8;UBERON:0010009,4.07e-28,8;UBERON:0010011,4.07e-28,8;UBERON:0000454,4.07e-28,8;UBERON:0001017,2.35e-16,73;UBERON:0001016,7.49e-16,75;UBERON:0000369,2.15e-15,5;UBERON:0002435,2.15e-15,5;UBERON:0000204,2.15e-15,5;UBERON:0010082,2.15e-15,5;UBERON:0002257,2.98e-15,3;UBERON:0002020,3.74e-15,34;UBERON:0000073,6.72e-15,54;UBERON:0002038,1.22e-14,3;UBERON:0009663,1.22e-14,3;UBERON:0009661,1.22e-14,3;UBERON:0000125,1.22e-14,3;UBERON:0002308,1.22e-14,3;UBERON:0004684,2.07e-14,3;UBERON:0002275,2.07e-14,3;UBERON:0004121,5.57e-12,95;UBERON:0000924,5.57e-12,95;UBERON:0006601,5.57e-12,95;UBERON:0002950,4.05e-11,4;UBERON:0001891,4.05e-11,4;UBERON:0009616,4.05e-11,4;UBERON:0010286,4.05e-11,4;UBERON:0001948,2.35e-09,5;UBERON:0002315,2.35e-09,5;UBERON:0001049,2.50e-09,52;UBERON:0005068,2.50e-09,52;UBERON:0006241,2.50e-09,52;UBERON:0007135,2.50e-09,52;UBERON:0003528,2.50e-09,29;UBERON:0002791,2.50e-09,29;UBERON:0001893,2.50e-09,29;UBERON:0002240,7.16e-08,6;UBERON:0005174,7.16e-08,6;UBERON:0001137,7.16e-08,6;UBERON:0002346,2.93e-07,64;UBERON:0003075,2.93e-07,64;UBERON:0007284,2.93e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0.210324961351382,0.285650984403804,0,1.10241719293459,0.862609239164127,0,2.20231761998777,1.53224805702225,1.68967186581868,1.71452174049252,2.92760459527711,2.08365348222704,2.51264699101243,2.25105044012672,1.06958773443767,3.24091444021034,1.85083185038834,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,1.7591609295801,0,0.255715457330331,0.41557608911912,0.648965052271031,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,1.28367683836726,0.252697211763798,0,0.188626341386076,0.280924522409647,0.448176066834085,0.402048282689293,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,1.22769312950907,0,0.578719832943424,0.249810577937946,0,0,0,0,0|short_description=p3@Gpr139}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:209776 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80UC8 | |||
|association_with_transcript=-224bp_to_ENSMUST00000084650,NM_001024138,uc009jky.1_5end | |||
|cluster_id=chr7:126328112..126328133,- | |||
|description=CAGE_peak_3_at_Gpr139_5end | |||
|id=chr7:126328112..126328133,- | |||
|ontology_enrichment_celltype=CL:0000117!1.00e-26!23;CL:0000337!1.00e-26!23;CL:0000540!1.60e-16!33;CL:0000047!1.60e-16!33;CL:0000031!1.60e-16!33;CL:0000404!1.60e-16!33;CL:0000393!5.86e-13!39;CL:0000211!5.86e-13!39;CL:0002319!3.40e-12!43;CL:0000221!9.12e-12!44;CL:0000133!9.12e-12!44;CL:0000055!1.42e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.03e-50,23;CL:0000337,2.03e-50,23;CL:0000540,1.77e-34,33;CL:0000047,1.77e-34,33;CL:0000031,1.77e-34,33;CL:0000404,1.77e-34,33;CL:0000393,7.93e-29,39;CL:0000211,7.93e-29,39;CL:0002319,6.21e-26,43;CL:0000221,2.72e-25,44;CL:0000133,2.72e-25,44;CL:0000120,1.54e-15,3;CL:0002612,2.98e-15,3;CL:0002321,5.11e-15,70;CL:0002613,6.38e-15,3;CL:0002614,1.22e-14,3;CL:0002610,2.07e-14,3;CL:0000723,5.54e-11,91;CL:0000048,5.54e-11,91;CL:0000034,3.79e-10,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.10e-16!75;UBERON:0001016!6.10e-16!75;UBERON:0001017!1.15e-15!73;UBERON:0005743!1.15e-15!73;UBERON:0001049!1.49e-15!52;UBERON:0005068!1.49e-15!52;UBERON:0006241!1.49e-15!52;UBERON:0007135!1.49e-15!52;UBERON:0002616!3.12e-14!49;UBERON:0000955!8.61e-14!50;UBERON:0006238!8.61e-14!50;UBERON:0002346!9.06e-13!71;UBERON:0003075!9.06e-13!71;UBERON:0007284!9.06e-13!71;UBERON:0002420!1.26e-12!8;UBERON:0007245!1.26e-12!8;UBERON:0010009!1.26e-12!8;UBERON:0010011!1.26e-12!8;UBERON:0000454!1.26e-12!8;UBERON:0004121!4.06e-12!102;UBERON:0000924!4.06e-12!102;UBERON:0006601!4.06e-12!102;UBERON:0000033!4.76e-12!63;UBERON:0002020!1.39e-10!34;UBERON:0003080!5.71e-10!40;UBERON:0003056!1.07e-09!49;UBERON:0002298!2.38e-09!6;UBERON:0002780!3.98e-09!39;UBERON:0001890!3.98e-09!39;UBERON:0006240!3.98e-09!39;UBERON:0000369!1.92e-08!5;UBERON:0002435!1.92e-08!5;UBERON:0000204!1.92e-08!5;UBERON:0010082!1.92e-08!5;UBERON:0002791!2.55e-07!29;UBERON:0003528!2.55e-07!29;UBERON:0001893!2.55e-07!29;UBERON:0002950!5.76e-07!4;UBERON:0001891!5.76e-07!4;UBERON:0009616!5.76e-07!4;UBERON:0003076!6.65e-07!12;UBERON:0003057!6.65e-07!12;UBERON:0007811!9.97e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,4.07e-28,8;UBERON:0007245,4.07e-28,8;UBERON:0010009,4.07e-28,8;UBERON:0010011,4.07e-28,8;UBERON:0000454,4.07e-28,8;UBERON:0001017,2.35e-16,73;UBERON:0001016,7.49e-16,75;UBERON:0000369,2.15e-15,5;UBERON:0002435,2.15e-15,5;UBERON:0000204,2.15e-15,5;UBERON:0010082,2.15e-15,5;UBERON:0002257,2.98e-15,3;UBERON:0002020,3.74e-15,34;UBERON:0000073,6.72e-15,54;UBERON:0002038,1.22e-14,3;UBERON:0009663,1.22e-14,3;UBERON:0009661,1.22e-14,3;UBERON:0000125,1.22e-14,3;UBERON:0002308,1.22e-14,3;UBERON:0004684,2.07e-14,3;UBERON:0002275,2.07e-14,3;UBERON:0004121,5.57e-12,95;UBERON:0000924,5.57e-12,95;UBERON:0006601,5.57e-12,95;UBERON:0002950,4.05e-11,4;UBERON:0001891,4.05e-11,4;UBERON:0009616,4.05e-11,4;UBERON:0010286,4.05e-11,4;UBERON:0001948,2.35e-09,5;UBERON:0002315,2.35e-09,5;UBERON:0001049,2.50e-09,52;UBERON:0005068,2.50e-09,52;UBERON:0006241,2.50e-09,52;UBERON:0007135,2.50e-09,52;UBERON:0003528,2.50e-09,29;UBERON:0002791,2.50e-09,29;UBERON:0001893,2.50e-09,29;UBERON:0002240,7.16e-08,6;UBERON:0005174,7.16e-08,6;UBERON:0001137,7.16e-08,6;UBERON:0002346,2.93e-07,64;UBERON:0003075,2.93e-07,64;UBERON:0007284,2.93e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0.210324961351382,0.285650984403804,0,1.10241719293459,0.862609239164127,0,2.20231761998777,1.53224805702225,1.68967186581868,1.71452174049252,2.92760459527711,2.08365348222704,2.51264699101243,2.25105044012672,1.06958773443767,3.24091444021034,1.85083185038834,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,1.7591609295801,0,0.255715457330331,0.41557608911912,0.648965052271031,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,1.28367683836726,0.252697211763798,0,0.188626341386076,0.280924522409647,0.448176066834085,0.402048282689293,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,1.22769312950907,0,0.578719832943424,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Gpr139 | |||
}} |
Revision as of 03:12, 4 August 2015
Short description: | p3@Gpr139 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gpr139_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -224bp_to_ENSMUST00000084650, NM_001024138, uc009jky.1_5end |
EntrezGene: | 209776 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.03e-50 | 23 |
neuroblast (sensu Vertebrata) | 2.03e-50 | 23 |
neuron | 1.77e-34 | 33 |
neuronal stem cell | 1.77e-34 | 33 |
neuroblast | 1.77e-34 | 33 |
electrically signaling cell | 1.77e-34 | 33 |
electrically responsive cell | 7.93e-29 | 39 |
electrically active cell | 7.93e-29 | 39 |
neural cell | 6.21e-26 | 43 |
ectodermal cell | 2.72e-25 | 44 |
neurectodermal cell | 2.72e-25 | 44 |
granule cell | 1.54e-15 | 3 |
neuron of the ventral spinal cord | 2.98e-15 | 3 |
embryonic cell | 5.11e-15 | 70 |
striatum neuron | 6.38e-15 | 3 |
neuron of the substantia nigra | 1.22e-14 | 3 |
raphe nuclei neuron | 2.07e-14 | 3 |
somatic stem cell | 5.54e-11 | 91 |
multi fate stem cell | 5.54e-11 | 91 |
stem cell | 3.79e-10 | 97 |