FFCP PHASE1:Mm9::chr5:34630935..34630954,-: Difference between revisions
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{{FFCP|EntrezGene=231125|HGNC=|MCL_coexpression_id=39|UniProt=Q6ZPK7|association_with_transcript=18bp_to_NM_001015039,uc008xca.1_5end|description=CAGE_peak_5_at_Zfyve28_5end|id=chr5:34630935..34630954,-|ontology_enrichment_celltype=CL:0000117!3.08e-10!23;CL:0000337!3.08e-10!23;CL:0000540!1.09e-07!33;CL:0000047!1.09e-07!33;CL:0000031!1.09e-07!33;CL:0000404!1.09e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.59e-09,23;CL:0000337,6.59e-09,23;CL:0002610,7.67e-08,3;CL:0002614,5.98e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.94e-23!75;UBERON:0001016!1.94e-23!75;UBERON:0001017!6.21e-23!73;UBERON:0005743!6.21e-23!73;UBERON:0001049!7.11e-23!52;UBERON:0005068!7.11e-23!52;UBERON:0006241!7.11e-23!52;UBERON:0007135!7.11e-23!52;UBERON:0002346!7.55e-22!71;UBERON:0003075!7.55e-22!71;UBERON:0007284!7.55e-22!71;UBERON:0000955!7.63e-22!50;UBERON:0006238!7.63e-22!50;UBERON:0004121!1.00e-21!102;UBERON:0000924!1.00e-21!102;UBERON:0006601!1.00e-21!102;UBERON:0002616!5.37e-21!49;UBERON:0000033!3.34e-19!63;UBERON:0002020!1.61e-16!34;UBERON:0003080!3.61e-16!40;UBERON:0003056!5.19e-16!49;UBERON:0002780!2.53e-15!39;UBERON:0001890!2.53e-15!39;UBERON:0006240!2.53e-15!39;UBERON:0002791!6.07e-13!29;UBERON:0003528!6.07e-13!29;UBERON:0001893!6.07e-13!29;UBERON:0007811!5.43e-11!86;UBERON:0002021!8.12e-11!10;UBERON:0000411!8.12e-11!10;UBERON:0001950!8.12e-11!10;UBERON:0002619!1.19e-10!17;UBERON:0000153!1.57e-10!94;UBERON:0000956!5.54e-09!21;UBERON:0001869!5.54e-09!21;UBERON:0000203!5.54e-09!21;UBERON:0003076!1.99e-07!12;UBERON:0003057!1.99e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.05e-34,54;UBERON:0001049,1.77e-30,52;UBERON:0005068,1.77e-30,52;UBERON:0006241,1.77e-30,52;UBERON:0007135,1.77e-30,52;UBERON:0001017,5.97e-29,73;UBERON:0001016,5.69e-28,75;UBERON:0002346,3.33e-27,64;UBERON:0003075,3.33e-27,64;UBERON:0007284,3.33e-27,64;UBERON:0000955,2.91e-25,47;UBERON:0006238,2.91e-25,47;UBERON:0002020,3.87e-24,34;UBERON:0002616,1.04e-23,46;UBERON:0004121,1.91e-23,95;UBERON:0000924,1.91e-23,95;UBERON:0006601,1.91e-23,95;UBERON:0010371,6.07e-23,73;UBERON:0002021,2.33e-22,10;UBERON:0000411,2.33e-22,10;UBERON:0001950,2.33e-22,10;UBERON:0003528,4.70e-19,29;UBERON:0002791,4.70e-19,29;UBERON:0001893,4.70e-19,29;UBERON:0003080,1.76e-18,40;UBERON:0003056,2.06e-17,49;UBERON:0002780,5.66e-17,39;UBERON:0001890,5.66e-17,39;UBERON:0006240,5.66e-17,39;UBERON:0010314,1.09e-16,92;UBERON:0002619,1.21e-14,17;UBERON:0000956,1.49e-13,21;UBERON:0001869,1.49e-13,21;UBERON:0000203,1.49e-13,21;UBERON:0003076,3.20e-13,12;UBERON:0003057,3.20e-13,12;UBERON:0000025,4.13e-10,114;UBERON:0004111,5.32e-09,122;UBERON:0002950,5.83e-09,4;UBERON:0001891,5.83e-09,4;UBERON:0009616,5.83e-09,4;UBERON:0010286,5.83e-09,4;UBERON:0002240,3.39e-08,6;UBERON:0005174,3.39e-08,6;UBERON:0001137,3.39e-08,6;UBERON:0004684,7.67e-08,3;UBERON:0002275,7.67e-08,3;UBERON:0002038,5.98e-07,3;UBERON:0009663,5.98e-07,3;UBERON:0009661,5.98e-07,3;UBERON:0000125,5.98e-07,3;UBERON:0002308,5.98e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.99955689082663,0.883474163806454,0.244981598429908,0.0958454710182364,0.919218786610021,9.91042928994498,5.10749352340751,6.14426133024974,0.131886287730194,0.457438218012048,0,5.58365998002762,1.68828783009504,3.0559649555362,1.17851434189467,1.99320353118744,1.67759501242771,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,15.8101630386235,14.6612694769419,0,0,0,0,5.84183493678809,22.4175295381127,2.01046963380583,3.47648640384553,4.09144731728529,7.48036960414416,6.81413304884582,0,0,0,1.68353484709179,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,2.58703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,1.89260953707715,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,3.5163505977661,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0,0.807322133479528,0.120625849856312,0.238744688006273,0.164140899745061,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.777804753376191,0.516639293910924,0.337912250981556,0.704143431874524,1.0416350787516,1.8874681996628,1.20792060413003,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.443971906748129,0.0897138566094757,0,0.19318959403219,0,0,0,0,7.90652579663893,2.76195141904306,6.87474616127276,4.1244763762485,5.48066015816514,7.55393897389701,6.07520250208625,8.10578165803597,9.5159905886683,7.7664046762773,0.207574695168353,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p5@Zfyve28}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:231125 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZPK7 | |||
|association_with_transcript=18bp_to_NM_001015039,uc008xca.1_5end | |||
|cluster_id=chr5:34630935..34630954,- | |||
|description=CAGE_peak_5_at_Zfyve28_5end | |||
|id=chr5:34630935..34630954,- | |||
|ontology_enrichment_celltype=CL:0000117!3.08e-10!23;CL:0000337!3.08e-10!23;CL:0000540!1.09e-07!33;CL:0000047!1.09e-07!33;CL:0000031!1.09e-07!33;CL:0000404!1.09e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.59e-09,23;CL:0000337,6.59e-09,23;CL:0002610,7.67e-08,3;CL:0002614,5.98e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.94e-23!75;UBERON:0001016!1.94e-23!75;UBERON:0001017!6.21e-23!73;UBERON:0005743!6.21e-23!73;UBERON:0001049!7.11e-23!52;UBERON:0005068!7.11e-23!52;UBERON:0006241!7.11e-23!52;UBERON:0007135!7.11e-23!52;UBERON:0002346!7.55e-22!71;UBERON:0003075!7.55e-22!71;UBERON:0007284!7.55e-22!71;UBERON:0000955!7.63e-22!50;UBERON:0006238!7.63e-22!50;UBERON:0004121!1.00e-21!102;UBERON:0000924!1.00e-21!102;UBERON:0006601!1.00e-21!102;UBERON:0002616!5.37e-21!49;UBERON:0000033!3.34e-19!63;UBERON:0002020!1.61e-16!34;UBERON:0003080!3.61e-16!40;UBERON:0003056!5.19e-16!49;UBERON:0002780!2.53e-15!39;UBERON:0001890!2.53e-15!39;UBERON:0006240!2.53e-15!39;UBERON:0002791!6.07e-13!29;UBERON:0003528!6.07e-13!29;UBERON:0001893!6.07e-13!29;UBERON:0007811!5.43e-11!86;UBERON:0002021!8.12e-11!10;UBERON:0000411!8.12e-11!10;UBERON:0001950!8.12e-11!10;UBERON:0002619!1.19e-10!17;UBERON:0000153!1.57e-10!94;UBERON:0000956!5.54e-09!21;UBERON:0001869!5.54e-09!21;UBERON:0000203!5.54e-09!21;UBERON:0003076!1.99e-07!12;UBERON:0003057!1.99e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.05e-34,54;UBERON:0001049,1.77e-30,52;UBERON:0005068,1.77e-30,52;UBERON:0006241,1.77e-30,52;UBERON:0007135,1.77e-30,52;UBERON:0001017,5.97e-29,73;UBERON:0001016,5.69e-28,75;UBERON:0002346,3.33e-27,64;UBERON:0003075,3.33e-27,64;UBERON:0007284,3.33e-27,64;UBERON:0000955,2.91e-25,47;UBERON:0006238,2.91e-25,47;UBERON:0002020,3.87e-24,34;UBERON:0002616,1.04e-23,46;UBERON:0004121,1.91e-23,95;UBERON:0000924,1.91e-23,95;UBERON:0006601,1.91e-23,95;UBERON:0010371,6.07e-23,73;UBERON:0002021,2.33e-22,10;UBERON:0000411,2.33e-22,10;UBERON:0001950,2.33e-22,10;UBERON:0003528,4.70e-19,29;UBERON:0002791,4.70e-19,29;UBERON:0001893,4.70e-19,29;UBERON:0003080,1.76e-18,40;UBERON:0003056,2.06e-17,49;UBERON:0002780,5.66e-17,39;UBERON:0001890,5.66e-17,39;UBERON:0006240,5.66e-17,39;UBERON:0010314,1.09e-16,92;UBERON:0002619,1.21e-14,17;UBERON:0000956,1.49e-13,21;UBERON:0001869,1.49e-13,21;UBERON:0000203,1.49e-13,21;UBERON:0003076,3.20e-13,12;UBERON:0003057,3.20e-13,12;UBERON:0000025,4.13e-10,114;UBERON:0004111,5.32e-09,122;UBERON:0002950,5.83e-09,4;UBERON:0001891,5.83e-09,4;UBERON:0009616,5.83e-09,4;UBERON:0010286,5.83e-09,4;UBERON:0002240,3.39e-08,6;UBERON:0005174,3.39e-08,6;UBERON:0001137,3.39e-08,6;UBERON:0004684,7.67e-08,3;UBERON:0002275,7.67e-08,3;UBERON:0002038,5.98e-07,3;UBERON:0009663,5.98e-07,3;UBERON:0009661,5.98e-07,3;UBERON:0000125,5.98e-07,3;UBERON:0002308,5.98e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.99955689082663,0.883474163806454,0.244981598429908,0.0958454710182364,0.919218786610021,9.91042928994498,5.10749352340751,6.14426133024974,0.131886287730194,0.457438218012048,0,5.58365998002762,1.68828783009504,3.0559649555362,1.17851434189467,1.99320353118744,1.67759501242771,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,15.8101630386235,14.6612694769419,0,0,0,0,5.84183493678809,22.4175295381127,2.01046963380583,3.47648640384553,4.09144731728529,7.48036960414416,6.81413304884582,0,0,0,1.68353484709179,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,2.58703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,1.89260953707715,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,3.5163505977661,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0,0.807322133479528,0.120625849856312,0.238744688006273,0.164140899745061,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.777804753376191,0.516639293910924,0.337912250981556,0.704143431874524,1.0416350787516,1.8874681996628,1.20792060413003,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.443971906748129,0.0897138566094757,0,0.19318959403219,0,0,0,0,7.90652579663893,2.76195141904306,6.87474616127276,4.1244763762485,5.48066015816514,7.55393897389701,6.07520250208625,8.10578165803597,9.5159905886683,7.7664046762773,0.207574695168353,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p5@Zfyve28 | |||
}} |
Revision as of 08:21, 4 August 2015
Short description: | p5@Zfyve28 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zfyve28_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 18bp_to_NM_001015039, uc008xca.1_5end |
EntrezGene: | 231125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.59e-09 | 23 |
neuroblast (sensu Vertebrata) | 6.59e-09 | 23 |
raphe nuclei neuron | 7.67e-08 | 3 |
neuron of the substantia nigra | 5.98e-07 | 3 |