FFCP PHASE1:Mm9::chr5:72091195..72091212,+: Difference between revisions
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{{FFCP|EntrezGene=14400|HGNC=|MCL_coexpression_id=1|UniProt=P50571|association_with_transcript=24bp_to_ENSMUST00000031122_5end|description=CAGE_peak_2_at_Gabrb1_5end|id=chr5:72091195..72091212,+|ontology_enrichment_celltype=CL:0000117!1.68e-09!23;CL:0000337!1.68e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-09,23;CL:0000337,1.25e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.63e-25!52;UBERON:0005068!5.63e-25!52;UBERON:0006241!5.63e-25!52;UBERON:0007135!5.63e-25!52;UBERON:0000955!1.07e-23!50;UBERON:0006238!1.07e-23!50;UBERON:0001017!2.33e-23!73;UBERON:0005743!2.33e-23!73;UBERON:0002616!5.80e-23!49;UBERON:0000073!5.46e-22!75;UBERON:0001016!5.46e-22!75;UBERON:0000033!3.87e-21!63;UBERON:0002346!4.42e-21!71;UBERON:0003075!4.42e-21!71;UBERON:0007284!4.42e-21!71;UBERON:0002020!1.88e-19!34;UBERON:0003080!1.23e-18!40;UBERON:0002780!7.21e-18!39;UBERON:0001890!7.21e-18!39;UBERON:0006240!7.21e-18!39;UBERON:0003056!7.64e-18!49;UBERON:0002791!2.82e-16!29;UBERON:0003528!2.82e-16!29;UBERON:0001893!2.82e-16!29;UBERON:0004121!5.19e-16!102;UBERON:0000924!5.19e-16!102;UBERON:0006601!5.19e-16!102;UBERON:0000956!2.14e-11!21;UBERON:0001869!2.14e-11!21;UBERON:0000203!2.14e-11!21;UBERON:0002619!3.62e-10!17;UBERON:0000153!5.11e-10!94;UBERON:0007811!7.19e-10!86;UBERON:0002021!9.42e-09!10;UBERON:0000411!9.42e-09!10;UBERON:0001950!9.42e-09!10;UBERON:0000025!1.72e-07!114;UBERON:0003076!6.53e-07!12;UBERON:0003057!6.53e-07!12;UBERON:0004111!7.17e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-32,54;UBERON:0001049,2.66e-30,52;UBERON:0005068,2.66e-30,52;UBERON:0006241,2.66e-30,52;UBERON:0007135,2.66e-30,52;UBERON:0001017,1.38e-28,73;UBERON:0001016,2.12e-27,75;UBERON:0000955,2.95e-25,47;UBERON:0006238,2.95e-25,47;UBERON:0002346,1.72e-24,64;UBERON:0003075,1.72e-24,64;UBERON:0007284,1.72e-24,64;UBERON:0002616,3.30e-24,46;UBERON:0002020,1.77e-23,34;UBERON:0003080,1.17e-21,40;UBERON:0010371,6.66e-21,73;UBERON:0002780,1.52e-20,39;UBERON:0001890,1.52e-20,39;UBERON:0006240,1.52e-20,39;UBERON:0004121,2.99e-20,95;UBERON:0000924,2.99e-20,95;UBERON:0006601,2.99e-20,95;UBERON:0003528,1.04e-18,29;UBERON:0002791,1.04e-18,29;UBERON:0001893,1.04e-18,29;UBERON:0003056,4.20e-18,49;UBERON:0010314,1.35e-14,92;UBERON:0002619,4.49e-13,17;UBERON:0002021,7.86e-13,10;UBERON:0000411,7.86e-13,10;UBERON:0001950,7.86e-13,10;UBERON:0000956,1.66e-11,21;UBERON:0001869,1.66e-11,21;UBERON:0000203,1.66e-11,21;UBERON:0000025,4.48e-10,114;UBERON:0004111,3.49e-09,122;UBERON:0003076,5.14e-09,12;UBERON:0003057,5.14e-09,12;UBERON:0002420,8.65e-09,8;UBERON:0007245,8.65e-09,8;UBERON:0010009,8.65e-09,8;UBERON:0010011,8.65e-09,8;UBERON:0000454,8.65e-09,8;UBERON:0002240,2.86e-07,6;UBERON:0005174,2.86e-07,6;UBERON:0001137,2.86e-07,6|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,3.29529274101708,6.61061656852564,0.55994568650145,0,0,0,0,0,0,1.54701627683233,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0,2.30530983192933,0.622137673850866,0.945041568321835,0.630974884054146,3.99911378165325,3.97563373712904,0.61245399607477,0.479227355091182,0,6.60695285996332,11.3641730895817,15.0534402591119,1.58263545276233,1.55528994124096,2.6045668527838,4.74611098302348,19.1339287410771,20.0165704587621,10.0173719061047,10.1083893367363,2.79599168737951,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,8.49064311333487,8.3778682725382,0,0,0,0,17.0761328921498,14.1825186873774,2.89005009859588,19.9897968221118,18.9229438424445,13.9217989854905,17.5220564113178,2.74966282395854,1.36847667671102,2.52722758433675,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.768682321709099,0.281105173679186,1.81092359517311,0,0.189106080167819,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.393528463494808,0,0.232533944750408,0,0,0,0,0,0,0,0,26.7068234676442,8.64398743985989,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.325929952884052,0,0,0,0,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,14.2890025089135,16.6440594960929,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.584511715822624,0,12.5315313404505,0.425820255624806,0.890328018336276,1.95464351224291,2.14461159864296,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,18.3837387107046,0.18006109403131,0,0,0.709360934569094,1.07021290561242,1.81003922662333,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0,18.1716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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14400 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P50571 | |||
|association_with_transcript=24bp_to_ENSMUST00000031122_5end | |||
|cluster_id=chr5:72091195..72091212,+ | |||
|description=CAGE_peak_2_at_Gabrb1_5end | |||
|id=chr5:72091195..72091212,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.68e-09!23;CL:0000337!1.68e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-09,23;CL:0000337,1.25e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.63e-25!52;UBERON:0005068!5.63e-25!52;UBERON:0006241!5.63e-25!52;UBERON:0007135!5.63e-25!52;UBERON:0000955!1.07e-23!50;UBERON:0006238!1.07e-23!50;UBERON:0001017!2.33e-23!73;UBERON:0005743!2.33e-23!73;UBERON:0002616!5.80e-23!49;UBERON:0000073!5.46e-22!75;UBERON:0001016!5.46e-22!75;UBERON:0000033!3.87e-21!63;UBERON:0002346!4.42e-21!71;UBERON:0003075!4.42e-21!71;UBERON:0007284!4.42e-21!71;UBERON:0002020!1.88e-19!34;UBERON:0003080!1.23e-18!40;UBERON:0002780!7.21e-18!39;UBERON:0001890!7.21e-18!39;UBERON:0006240!7.21e-18!39;UBERON:0003056!7.64e-18!49;UBERON:0002791!2.82e-16!29;UBERON:0003528!2.82e-16!29;UBERON:0001893!2.82e-16!29;UBERON:0004121!5.19e-16!102;UBERON:0000924!5.19e-16!102;UBERON:0006601!5.19e-16!102;UBERON:0000956!2.14e-11!21;UBERON:0001869!2.14e-11!21;UBERON:0000203!2.14e-11!21;UBERON:0002619!3.62e-10!17;UBERON:0000153!5.11e-10!94;UBERON:0007811!7.19e-10!86;UBERON:0002021!9.42e-09!10;UBERON:0000411!9.42e-09!10;UBERON:0001950!9.42e-09!10;UBERON:0000025!1.72e-07!114;UBERON:0003076!6.53e-07!12;UBERON:0003057!6.53e-07!12;UBERON:0004111!7.17e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-32,54;UBERON:0001049,2.66e-30,52;UBERON:0005068,2.66e-30,52;UBERON:0006241,2.66e-30,52;UBERON:0007135,2.66e-30,52;UBERON:0001017,1.38e-28,73;UBERON:0001016,2.12e-27,75;UBERON:0000955,2.95e-25,47;UBERON:0006238,2.95e-25,47;UBERON:0002346,1.72e-24,64;UBERON:0003075,1.72e-24,64;UBERON:0007284,1.72e-24,64;UBERON:0002616,3.30e-24,46;UBERON:0002020,1.77e-23,34;UBERON:0003080,1.17e-21,40;UBERON:0010371,6.66e-21,73;UBERON:0002780,1.52e-20,39;UBERON:0001890,1.52e-20,39;UBERON:0006240,1.52e-20,39;UBERON:0004121,2.99e-20,95;UBERON:0000924,2.99e-20,95;UBERON:0006601,2.99e-20,95;UBERON:0003528,1.04e-18,29;UBERON:0002791,1.04e-18,29;UBERON:0001893,1.04e-18,29;UBERON:0003056,4.20e-18,49;UBERON:0010314,1.35e-14,92;UBERON:0002619,4.49e-13,17;UBERON:0002021,7.86e-13,10;UBERON:0000411,7.86e-13,10;UBERON:0001950,7.86e-13,10;UBERON:0000956,1.66e-11,21;UBERON:0001869,1.66e-11,21;UBERON:0000203,1.66e-11,21;UBERON:0000025,4.48e-10,114;UBERON:0004111,3.49e-09,122;UBERON:0003076,5.14e-09,12;UBERON:0003057,5.14e-09,12;UBERON:0002420,8.65e-09,8;UBERON:0007245,8.65e-09,8;UBERON:0010009,8.65e-09,8;UBERON:0010011,8.65e-09,8;UBERON:0000454,8.65e-09,8;UBERON:0002240,2.86e-07,6;UBERON:0005174,2.86e-07,6;UBERON:0001137,2.86e-07,6 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,3.29529274101708,6.61061656852564,0.55994568650145,0,0,0,0,0,0,1.54701627683233,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0,2.30530983192933,0.622137673850866,0.945041568321835,0.630974884054146,3.99911378165325,3.97563373712904,0.61245399607477,0.479227355091182,0,6.60695285996332,11.3641730895817,15.0534402591119,1.58263545276233,1.55528994124096,2.6045668527838,4.74611098302348,19.1339287410771,20.0165704587621,10.0173719061047,10.1083893367363,2.79599168737951,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,8.49064311333487,8.3778682725382,0,0,0,0,17.0761328921498,14.1825186873774,2.89005009859588,19.9897968221118,18.9229438424445,13.9217989854905,17.5220564113178,2.74966282395854,1.36847667671102,2.52722758433675,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.768682321709099,0.281105173679186,1.81092359517311,0,0.189106080167819,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.393528463494808,0,0.232533944750408,0,0,0,0,0,0,0,0,26.7068234676442,8.64398743985989,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.325929952884052,0,0,0,0,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,14.2890025089135,16.6440594960929,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.584511715822624,0,12.5315313404505,0.425820255624806,0.890328018336276,1.95464351224291,2.14461159864296,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,18.3837387107046,0.18006109403131,0,0,0.709360934569094,1.07021290561242,1.81003922662333,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0,18.17167959703,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0.747582730219894,0.66183396182839,0.194451188344048,1.03327858782185,1.01373675294467,0.704143431874524,0.911430693907651,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.214368379079066,0,23.1548255472997,19.3336599333014,12.0308057822273,15.1230800462445,11.6464028361009,12.8416962556249,24.300810008345,16.2115633160719,15.8599843144472,13.4617681055473,0,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0.551530525350042,2.66696073361938,1.44224540067226,1.28367683836726,1.26348605881899,1.2673964994512,0.565879024158229,1.96647165686753,1.08842759088278,1.83793500657962,0.476293691283074,1.73826488917283,1.15745532278223,0.824171801606613,1.32479028120958,0.342869252385415,0.887379030796687,1.43061713968393,1.0174249164263,1.03520318456864,1.52306294205018,1.28049581010941,1.05227884575137,1.49384525230448,1.68342681497322,1.89816028998679,1.37906275325789,0.409231043169689,2.63392630016142,0.964533054905707,2.24829520144151,1.16965804222704,1.93383948643468,0.382576664137687,0.661774257358546,0.927471342481686 | |||
|short_description=p2@Gabrb1 | |||
}} |
Revision as of 13:58, 4 August 2015
Short description: | p2@Gabrb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gabrb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 24bp_to_ENSMUST00000031122_5end |
EntrezGene: | 14400 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.25e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-09 | 23 |