FFCP PHASE1:Mm9::chr4:43455274..43455283,+: Difference between revisions
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{{FFCP|EntrezGene=21754|HGNC=|MCL_coexpression_id=335|UniProt=O70146|association_with_transcript=125bp_to_NM_011571,uc008spq.2_5end|description=CAGE_peak_12_at_Tesk1_5end|id=chr4:43455274..43455283,+|ontology_enrichment_celltype=CL:0000117!5.62e-16!23;CL:0000337!5.62e-16!23;CL:0000540!1.34e-15!33;CL:0000047!1.34e-15!33;CL:0000031!1.34e-15!33;CL:0000404!1.34e-15!33;CL:0002319!3.10e-12!43;CL:0000221!3.21e-12!44;CL:0000133!3.21e-12!44;CL:0000393!6.29e-12!39;CL:0000211!6.29e-12!39;CL:0000055!3.15e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-54,23;CL:0000337,1.61e-54,23;CL:0000540,7.33e-37,33;CL:0000047,7.33e-37,33;CL:0000031,7.33e-37,33;CL:0000404,7.33e-37,33;CL:0000393,1.32e-30,39;CL:0000211,1.32e-30,39;CL:0002319,2.11e-27,43;CL:0000221,1.08e-26,44;CL:0000133,1.08e-26,44;CL:0002609,9.08e-20,6;CL:0002321,2.46e-15,70;CL:0000120,1.45e-11,3;CL:0000723,6.86e-11,91;CL:0000048,6.86e-11,91;CL:0002608,7.48e-11,3;CL:0002613,1.18e-10,3;CL:0002614,2.01e-10,3;CL:0000034,5.67e-10,97;CL:0002611,2.64e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.08e-14!73;UBERON:0005743!5.08e-14!73;UBERON:0000073!7.78e-14!75;UBERON:0001016!7.78e-14!75;UBERON:0001049!7.21e-11!52;UBERON:0005068!7.21e-11!52;UBERON:0006241!7.21e-11!52;UBERON:0007135!7.21e-11!52;UBERON:0004121!8.59e-11!102;UBERON:0000924!8.59e-11!102;UBERON:0006601!8.59e-11!102;UBERON:0002020!1.63e-10!34;UBERON:0002346!2.62e-10!71;UBERON:0003075!2.62e-10!71;UBERON:0007284!2.62e-10!71;UBERON:0003056!4.22e-09!49;UBERON:0000033!5.08e-09!63;UBERON:0000955!6.55e-09!50;UBERON:0006238!6.55e-09!50;UBERON:0002616!1.84e-08!49;UBERON:0003080!2.31e-08!40;UBERON:0007811!2.60e-08!86;UBERON:0002780!8.05e-08!39;UBERON:0001890!8.05e-08!39;UBERON:0006240!8.05e-08!39;UBERON:0002791!1.20e-07!29;UBERON:0003528!1.20e-07!29;UBERON:0001893!1.20e-07!29;UBERON:0002420!3.63e-07!8;UBERON:0007245!3.63e-07!8;UBERON:0010009!3.63e-07!8;UBERON:0010011!3.63e-07!8;UBERON:0000454!3.63e-07!8;UBERON:0000153!6.77e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.42e-25,34;UBERON:0000073,1.07e-20,54;UBERON:0001017,3.72e-20,73;UBERON:0003528,6.10e-20,29;UBERON:0002791,6.10e-20,29;UBERON:0001893,6.10e-20,29;UBERON:0002420,1.21e-19,8;UBERON:0007245,1.21e-19,8;UBERON:0010009,1.21e-19,8;UBERON:0010011,1.21e-19,8;UBERON:0000454,1.21e-19,8;UBERON:0001016,1.66e-19,75;UBERON:0001049,2.50e-17,52;UBERON:0005068,2.50e-17,52;UBERON:0006241,2.50e-17,52;UBERON:0007135,2.50e-17,52;UBERON:0003080,7.55e-16,40;UBERON:0004121,1.70e-14,95;UBERON:0000924,1.70e-14,95;UBERON:0006601,1.70e-14,95;UBERON:0002780,4.02e-14,39;UBERON:0001890,4.02e-14,39;UBERON:0006240,4.02e-14,39;UBERON:0002346,2.07e-13,64;UBERON:0003075,2.07e-13,64;UBERON:0007284,2.07e-13,64;UBERON:0002616,2.15e-13,46;UBERON:0002950,3.05e-13,4;UBERON:0001891,3.05e-13,4;UBERON:0009616,3.05e-13,4;UBERON:0010286,3.05e-13,4;UBERON:0000955,4.79e-13,47;UBERON:0006238,4.79e-13,47;UBERON:0003056,2.16e-12,49;UBERON:0010371,2.57e-11,73;UBERON:0000369,4.92e-11,5;UBERON:0002435,4.92e-11,5;UBERON:0000204,4.92e-11,5;UBERON:0010082,4.92e-11,5;UBERON:0002038,2.01e-10,3;UBERON:0009663,2.01e-10,3;UBERON:0009661,2.01e-10,3;UBERON:0000125,2.01e-10,3;UBERON:0002308,2.01e-10,3;UBERON:0010314,3.05e-08,92;UBERON:0002256,2.64e-07,2;UBERON:0000956,5.07e-07,21;UBERON:0001869,5.07e-07,21;UBERON:0000203,5.07e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.84473233291,0.70219357896598,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0,0,0.286533439938757,0,2.63011399117477,4.7609188134483,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.4850653216486,1.68259969081106,1.42825492201902,1.10434270475807,1.22490799214954,1.34183659425531,2.75765635983006,0,1.0214987046815,1.0752457327937,1.58263545276233,2.65314166446988,1.04182674111352,1.11673199600552,1.68828783009504,1.22238598221448,0.589257170947335,0.711858403995515,2.79599168737951,0.302904773332736,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.608930956624282,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0.292780797011547,0,0,0.239630249011841,0,0,1.19832511523858,0.915001205637253,1.63350657746724,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.748401490664606,0.512454881139399,0.281105173679186,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0.804820204198858,0.467061369468678,0.493679549740441,0.164167464079095,0.162137619091711,0.584799949701329,0.878200461164203,0.536825675041487,0,0.617427674275707,0.330418782983798,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0.35163505977661,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.839708713941948,0.138199973804424,0,0,0.406638934253697,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,0,11.837551712368,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,1.20792060413003,2.01621004380506,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.304827226619999,0.100826185136841,0.194915761479505,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,1.5107877947794,0,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0,0.243106717068294,0,0.367687016900028,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0.220591419119515,0|short_description=p12@Tesk1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21754 | |||
|HGNC= | |||
|MCL_coexpression_id=335 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O70146 | |||
|association_with_transcript=125bp_to_NM_011571,uc008spq.2_5end | |||
|cluster_id=chr4:43455274..43455283,+ | |||
|description=CAGE_peak_12_at_Tesk1_5end | |||
|id=chr4:43455274..43455283,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.62e-16!23;CL:0000337!5.62e-16!23;CL:0000540!1.34e-15!33;CL:0000047!1.34e-15!33;CL:0000031!1.34e-15!33;CL:0000404!1.34e-15!33;CL:0002319!3.10e-12!43;CL:0000221!3.21e-12!44;CL:0000133!3.21e-12!44;CL:0000393!6.29e-12!39;CL:0000211!6.29e-12!39;CL:0000055!3.15e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-54,23;CL:0000337,1.61e-54,23;CL:0000540,7.33e-37,33;CL:0000047,7.33e-37,33;CL:0000031,7.33e-37,33;CL:0000404,7.33e-37,33;CL:0000393,1.32e-30,39;CL:0000211,1.32e-30,39;CL:0002319,2.11e-27,43;CL:0000221,1.08e-26,44;CL:0000133,1.08e-26,44;CL:0002609,9.08e-20,6;CL:0002321,2.46e-15,70;CL:0000120,1.45e-11,3;CL:0000723,6.86e-11,91;CL:0000048,6.86e-11,91;CL:0002608,7.48e-11,3;CL:0002613,1.18e-10,3;CL:0002614,2.01e-10,3;CL:0000034,5.67e-10,97;CL:0002611,2.64e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.08e-14!73;UBERON:0005743!5.08e-14!73;UBERON:0000073!7.78e-14!75;UBERON:0001016!7.78e-14!75;UBERON:0001049!7.21e-11!52;UBERON:0005068!7.21e-11!52;UBERON:0006241!7.21e-11!52;UBERON:0007135!7.21e-11!52;UBERON:0004121!8.59e-11!102;UBERON:0000924!8.59e-11!102;UBERON:0006601!8.59e-11!102;UBERON:0002020!1.63e-10!34;UBERON:0002346!2.62e-10!71;UBERON:0003075!2.62e-10!71;UBERON:0007284!2.62e-10!71;UBERON:0003056!4.22e-09!49;UBERON:0000033!5.08e-09!63;UBERON:0000955!6.55e-09!50;UBERON:0006238!6.55e-09!50;UBERON:0002616!1.84e-08!49;UBERON:0003080!2.31e-08!40;UBERON:0007811!2.60e-08!86;UBERON:0002780!8.05e-08!39;UBERON:0001890!8.05e-08!39;UBERON:0006240!8.05e-08!39;UBERON:0002791!1.20e-07!29;UBERON:0003528!1.20e-07!29;UBERON:0001893!1.20e-07!29;UBERON:0002420!3.63e-07!8;UBERON:0007245!3.63e-07!8;UBERON:0010009!3.63e-07!8;UBERON:0010011!3.63e-07!8;UBERON:0000454!3.63e-07!8;UBERON:0000153!6.77e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.42e-25,34;UBERON:0000073,1.07e-20,54;UBERON:0001017,3.72e-20,73;UBERON:0003528,6.10e-20,29;UBERON:0002791,6.10e-20,29;UBERON:0001893,6.10e-20,29;UBERON:0002420,1.21e-19,8;UBERON:0007245,1.21e-19,8;UBERON:0010009,1.21e-19,8;UBERON:0010011,1.21e-19,8;UBERON:0000454,1.21e-19,8;UBERON:0001016,1.66e-19,75;UBERON:0001049,2.50e-17,52;UBERON:0005068,2.50e-17,52;UBERON:0006241,2.50e-17,52;UBERON:0007135,2.50e-17,52;UBERON:0003080,7.55e-16,40;UBERON:0004121,1.70e-14,95;UBERON:0000924,1.70e-14,95;UBERON:0006601,1.70e-14,95;UBERON:0002780,4.02e-14,39;UBERON:0001890,4.02e-14,39;UBERON:0006240,4.02e-14,39;UBERON:0002346,2.07e-13,64;UBERON:0003075,2.07e-13,64;UBERON:0007284,2.07e-13,64;UBERON:0002616,2.15e-13,46;UBERON:0002950,3.05e-13,4;UBERON:0001891,3.05e-13,4;UBERON:0009616,3.05e-13,4;UBERON:0010286,3.05e-13,4;UBERON:0000955,4.79e-13,47;UBERON:0006238,4.79e-13,47;UBERON:0003056,2.16e-12,49;UBERON:0010371,2.57e-11,73;UBERON:0000369,4.92e-11,5;UBERON:0002435,4.92e-11,5;UBERON:0000204,4.92e-11,5;UBERON:0010082,4.92e-11,5;UBERON:0002038,2.01e-10,3;UBERON:0009663,2.01e-10,3;UBERON:0009661,2.01e-10,3;UBERON:0000125,2.01e-10,3;UBERON:0002308,2.01e-10,3;UBERON:0010314,3.05e-08,92;UBERON:0002256,2.64e-07,2;UBERON:0000956,5.07e-07,21;UBERON:0001869,5.07e-07,21;UBERON:0000203,5.07e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.84473233291,0.70219357896598,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0,0,0.286533439938757,0,2.63011399117477,4.7609188134483,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.4850653216486,1.68259969081106,1.42825492201902,1.10434270475807,1.22490799214954,1.34183659425531,2.75765635983006,0,1.0214987046815,1.0752457327937,1.58263545276233,2.65314166446988,1.04182674111352,1.11673199600552,1.68828783009504,1.22238598221448,0.589257170947335,0.711858403995515,2.79599168737951,0.302904773332736,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.608930956624282,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0.292780797011547,0,0,0.239630249011841,0,0,1.19832511523858,0.915001205637253,1.63350657746724,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.748401490664606,0.512454881139399,0.281105173679186,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0.804820204198858,0.467061369468678,0.493679549740441,0.164167464079095,0.162137619091711,0.584799949701329,0.878200461164203,0.536825675041487,0,0.617427674275707,0.330418782983798,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0.35163505977661,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.839708713941948,0.138199973804424,0,0,0.406638934253697,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,0,11.837551712368,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,1.20792060413003,2.01621004380506,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.304827226619999,0.100826185136841,0.194915761479505,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,1.5107877947794,0,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0,0.243106717068294,0,0.367687016900028,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p12@Tesk1 | |||
}} |
Revision as of 11:40, 5 August 2015
Short description: | p12@Tesk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Tesk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:335 |
Association with transcript: | 125bp_to_NM_011571, uc008spq.2_5end |
EntrezGene: | 21754 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.61e-54 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-54 | 23 |
neuron | 7.33e-37 | 33 |
neuronal stem cell | 7.33e-37 | 33 |
neuroblast | 7.33e-37 | 33 |
electrically signaling cell | 7.33e-37 | 33 |
electrically responsive cell | 1.32e-30 | 39 |
electrically active cell | 1.32e-30 | 39 |
neural cell | 2.11e-27 | 43 |
ectodermal cell | 1.08e-26 | 44 |
neurectodermal cell | 1.08e-26 | 44 |
neuron of cerebral cortex | 9.08e-20 | 6 |
embryonic cell | 2.46e-15 | 70 |
granule cell | 1.45e-11 | 3 |
somatic stem cell | 6.86e-11 | 91 |
multi fate stem cell | 6.86e-11 | 91 |
hippocampal neuron | 7.48e-11 | 3 |
striatum neuron | 1.18e-10 | 3 |
neuron of the substantia nigra | 2.01e-10 | 3 |
stem cell | 5.67e-10 | 97 |
neuron of the dorsal spinal cord | 2.64e-07 | 2 |