FFCP PHASE1:Mm9::chr13:100191678..100191695,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100191678..100191695,-|id=chr13:100191678..100191695,-|ontology_enrichment_celltype=CL:0000540!2.57e-26!33;CL:0000047!2.57e-26!33;CL:0000031!2.57e-26!33;CL:0000404!2.57e-26!33;CL:0000117!5.03e-21!23;CL:0000337!5.03e-21!23;CL:0002319!5.85e-21!43;CL:0000393!1.79e-20!39;CL:0000211!1.79e-20!39;CL:0000221!3.31e-20!44;CL:0000133!3.31e-20!44;CL:0000055!2.38e-16!50;CL:0002321!1.48e-08!70;CL:0000220!1.48e-08!70;CL:0000107!1.71e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,9.80e-42,33;CL:0000047,9.80e-42,33;CL:0000031,9.80e-42,33;CL:0000404,9.80e-42,33;CL:0000393,1.35e-34,39;CL:0000211,1.35e-34,39;CL:0000117,9.86e-33,23;CL:0000337,9.86e-33,23;CL:0002319,6.10e-31,43;CL:0000221,3.94e-30,44;CL:0000133,3.94e-30,44;CL:0002321,3.52e-17,70;CL:0000723,4.09e-12,91;CL:0000048,4.09e-12,91;CL:0000107,4.49e-11,9;CL:0000034,4.53e-11,97;CL:0002610,1.59e-09,3;CL:0002613,1.94e-09,3;CL:0002609,1.50e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.38e-35!75;UBERON:0001016!9.38e-35!75;UBERON:0001017!6.89e-34!73;UBERON:0005743!6.89e-34!73;UBERON:0004121!6.90e-30!102;UBERON:0000924!6.90e-30!102;UBERON:0006601!6.90e-30!102;UBERON:0002346!1.13e-28!71;UBERON:0003075!1.13e-28!71;UBERON:0007284!1.13e-28!71;UBERON:0002020!7.42e-28!34;UBERON:0001049!3.84e-25!52;UBERON:0005068!3.84e-25!52;UBERON:0006241!3.84e-25!52;UBERON:0007135!3.84e-25!52;UBERON:0002791!6.58e-23!29;UBERON:0003528!6.58e-23!29;UBERON:0001893!6.58e-23!29;UBERON:0002616!1.02e-22!49;UBERON:0000955!5.45e-22!50;UBERON:0006238!5.45e-22!50;UBERON:0003080!2.62e-20!40;UBERON:0003056!3.57e-20!49;UBERON:0000033!7.75e-20!63;UBERON:0002780!1.21e-19!39;UBERON:0001890!1.21e-19!39;UBERON:0006240!1.21e-19!39;UBERON:0000956!5.47e-16!21;UBERON:0001869!5.47e-16!21;UBERON:0000203!5.47e-16!21;UBERON:0002619!1.31e-12!17;UBERON:0002021!1.40e-11!10;UBERON:0000411!1.40e-11!10;UBERON:0001950!1.40e-11!10;UBERON:0007811!7.79e-11!86;UBERON:0000153!2.05e-09!94;UBERON:0002420!4.59e-08!8;UBERON:0007245!4.59e-08!8;UBERON:0010009!4.59e-08!8;UBERON:0010011!4.59e-08!8;UBERON:0000454!4.59e-08!8;UBERON:0000010!5.57e-08!11;UBERON:0002410!1.71e-07!9;UBERON:0002240!9.38e-07!6;UBERON:0005174!9.38e-07!6;UBERON:0001137!9.38e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-33,73;UBERON:0001016,1.14e-32,75;UBERON:0002020,1.39e-30,34;UBERON:0003528,7.33e-26,29;UBERON:0002791,7.33e-26,29;UBERON:0001893,7.33e-26,29;UBERON:0004121,1.17e-24,95;UBERON:0000924,1.17e-24,95;UBERON:0006601,1.17e-24,95;UBERON:0000073,2.52e-24,54;UBERON:0002021,7.17e-19,10;UBERON:0000411,7.17e-19,10;UBERON:0001950,7.17e-19,10;UBERON:0001049,1.61e-18,52;UBERON:0005068,1.61e-18,52;UBERON:0006241,1.61e-18,52;UBERON:0007135,1.61e-18,52;UBERON:0002780,2.73e-18,39;UBERON:0001890,2.73e-18,39;UBERON:0006240,2.73e-18,39;UBERON:0000956,3.19e-18,21;UBERON:0001869,3.19e-18,21;UBERON:0000203,3.19e-18,21;UBERON:0002346,8.37e-18,64;UBERON:0003075,8.37e-18,64;UBERON:0007284,8.37e-18,64;UBERON:0003080,9.65e-18,40;UBERON:0002619,4.11e-16,17;UBERON:0010371,4.89e-15,73;UBERON:0002616,5.96e-15,46;UBERON:0000955,1.48e-14,47;UBERON:0006238,1.48e-14,47;UBERON:0003056,8.21e-14,49;UBERON:0002410,4.49e-11,9;UBERON:0010314,5.66e-11,92;UBERON:0004684,1.59e-09,3;UBERON:0002275,1.59e-09,3;UBERON:0000013,1.82e-09,3;UBERON:0011216,3.24e-09,194;UBERON:0000010,5.99e-09,11;UBERON:0002420,1.06e-08,8;UBERON:0007245,1.06e-08,8;UBERON:0010009,1.06e-08,8;UBERON:0010011,1.06e-08,8;UBERON:0000454,1.06e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0,0,1.55534418462716,0.675029691658453,1.47227472945967,0.571301968807607,1.32521124570968,1.10241719293459,1.62937300731002,0,4.40463523997555,1.78762273319263,1.22885226604995,2.1101806036831,4.20843160571084,1.04182674111352,0.837548997004143,1.12552522006336,1.37518422999129,2.65165726926301,0.854230084794618,1.67759501242771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0,0.62336413367868,0.324482526135515,0,0,0,0,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,1.17131623288992,3.66219776145758,0,1.11399337041197,0.283076530788832,1.61924280669958,2.63030272120181,1.58115111178609,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,5.0827665835536,1.38097570952153,2.29158205375759,4.64003592327956,0.685082519770642,2.2661816921691,2.02506750069542,2.2516060161211,2.71885445390523,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr13:100191678..100191695,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100191678..100191695,- | |||
|description=CAGE_peak_at_chr13:100191678..100191695,- | |||
|id=chr13:100191678..100191695,- | |||
|ontology_enrichment_celltype=CL:0000540!2.57e-26!33;CL:0000047!2.57e-26!33;CL:0000031!2.57e-26!33;CL:0000404!2.57e-26!33;CL:0000117!5.03e-21!23;CL:0000337!5.03e-21!23;CL:0002319!5.85e-21!43;CL:0000393!1.79e-20!39;CL:0000211!1.79e-20!39;CL:0000221!3.31e-20!44;CL:0000133!3.31e-20!44;CL:0000055!2.38e-16!50;CL:0002321!1.48e-08!70;CL:0000220!1.48e-08!70;CL:0000107!1.71e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.80e-42,33;CL:0000047,9.80e-42,33;CL:0000031,9.80e-42,33;CL:0000404,9.80e-42,33;CL:0000393,1.35e-34,39;CL:0000211,1.35e-34,39;CL:0000117,9.86e-33,23;CL:0000337,9.86e-33,23;CL:0002319,6.10e-31,43;CL:0000221,3.94e-30,44;CL:0000133,3.94e-30,44;CL:0002321,3.52e-17,70;CL:0000723,4.09e-12,91;CL:0000048,4.09e-12,91;CL:0000107,4.49e-11,9;CL:0000034,4.53e-11,97;CL:0002610,1.59e-09,3;CL:0002613,1.94e-09,3;CL:0002609,1.50e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.38e-35!75;UBERON:0001016!9.38e-35!75;UBERON:0001017!6.89e-34!73;UBERON:0005743!6.89e-34!73;UBERON:0004121!6.90e-30!102;UBERON:0000924!6.90e-30!102;UBERON:0006601!6.90e-30!102;UBERON:0002346!1.13e-28!71;UBERON:0003075!1.13e-28!71;UBERON:0007284!1.13e-28!71;UBERON:0002020!7.42e-28!34;UBERON:0001049!3.84e-25!52;UBERON:0005068!3.84e-25!52;UBERON:0006241!3.84e-25!52;UBERON:0007135!3.84e-25!52;UBERON:0002791!6.58e-23!29;UBERON:0003528!6.58e-23!29;UBERON:0001893!6.58e-23!29;UBERON:0002616!1.02e-22!49;UBERON:0000955!5.45e-22!50;UBERON:0006238!5.45e-22!50;UBERON:0003080!2.62e-20!40;UBERON:0003056!3.57e-20!49;UBERON:0000033!7.75e-20!63;UBERON:0002780!1.21e-19!39;UBERON:0001890!1.21e-19!39;UBERON:0006240!1.21e-19!39;UBERON:0000956!5.47e-16!21;UBERON:0001869!5.47e-16!21;UBERON:0000203!5.47e-16!21;UBERON:0002619!1.31e-12!17;UBERON:0002021!1.40e-11!10;UBERON:0000411!1.40e-11!10;UBERON:0001950!1.40e-11!10;UBERON:0007811!7.79e-11!86;UBERON:0000153!2.05e-09!94;UBERON:0002420!4.59e-08!8;UBERON:0007245!4.59e-08!8;UBERON:0010009!4.59e-08!8;UBERON:0010011!4.59e-08!8;UBERON:0000454!4.59e-08!8;UBERON:0000010!5.57e-08!11;UBERON:0002410!1.71e-07!9;UBERON:0002240!9.38e-07!6;UBERON:0005174!9.38e-07!6;UBERON:0001137!9.38e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-33,73;UBERON:0001016,1.14e-32,75;UBERON:0002020,1.39e-30,34;UBERON:0003528,7.33e-26,29;UBERON:0002791,7.33e-26,29;UBERON:0001893,7.33e-26,29;UBERON:0004121,1.17e-24,95;UBERON:0000924,1.17e-24,95;UBERON:0006601,1.17e-24,95;UBERON:0000073,2.52e-24,54;UBERON:0002021,7.17e-19,10;UBERON:0000411,7.17e-19,10;UBERON:0001950,7.17e-19,10;UBERON:0001049,1.61e-18,52;UBERON:0005068,1.61e-18,52;UBERON:0006241,1.61e-18,52;UBERON:0007135,1.61e-18,52;UBERON:0002780,2.73e-18,39;UBERON:0001890,2.73e-18,39;UBERON:0006240,2.73e-18,39;UBERON:0000956,3.19e-18,21;UBERON:0001869,3.19e-18,21;UBERON:0000203,3.19e-18,21;UBERON:0002346,8.37e-18,64;UBERON:0003075,8.37e-18,64;UBERON:0007284,8.37e-18,64;UBERON:0003080,9.65e-18,40;UBERON:0002619,4.11e-16,17;UBERON:0010371,4.89e-15,73;UBERON:0002616,5.96e-15,46;UBERON:0000955,1.48e-14,47;UBERON:0006238,1.48e-14,47;UBERON:0003056,8.21e-14,49;UBERON:0002410,4.49e-11,9;UBERON:0010314,5.66e-11,92;UBERON:0004684,1.59e-09,3;UBERON:0002275,1.59e-09,3;UBERON:0000013,1.82e-09,3;UBERON:0011216,3.24e-09,194;UBERON:0000010,5.99e-09,11;UBERON:0002420,1.06e-08,8;UBERON:0007245,1.06e-08,8;UBERON:0010009,1.06e-08,8;UBERON:0010011,1.06e-08,8;UBERON:0000454,1.06e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0,0,1.55534418462716,0.675029691658453,1.47227472945967,0.571301968807607,1.32521124570968,1.10241719293459,1.62937300731002,0,4.40463523997555,1.78762273319263,1.22885226604995,2.1101806036831,4.20843160571084,1.04182674111352,0.837548997004143,1.12552522006336,1.37518422999129,2.65165726926301,0.854230084794618,1.67759501242771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0,0.62336413367868,0.324482526135515,0,0,0,0,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,1.17131623288992,3.66219776145758,0,1.11399337041197,0.283076530788832,1.61924280669958,2.63030272120181,1.58115111178609,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,5.0827665835536,1.38097570952153,2.29158205375759,4.64003592327956,0.685082519770642,2.2661816921691,2.02506750069542,2.2516060161211,2.71885445390523,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:100191678..100191695,- | |||
}} |
Latest revision as of 12:12, 5 August 2015
Short description: | p@chr13:100191678..100191695, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100191678..100191695, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.80e-42 | 33 |
neuronal stem cell | 9.80e-42 | 33 |
neuroblast | 9.80e-42 | 33 |
electrically signaling cell | 9.80e-42 | 33 |
electrically responsive cell | 1.35e-34 | 39 |
electrically active cell | 1.35e-34 | 39 |
CNS neuron (sensu Vertebrata) | 9.86e-33 | 23 |
neuroblast (sensu Vertebrata) | 9.86e-33 | 23 |
neural cell | 6.10e-31 | 43 |
ectodermal cell | 3.94e-30 | 44 |
neurectodermal cell | 3.94e-30 | 44 |
embryonic cell | 3.52e-17 | 70 |
somatic stem cell | 4.09e-12 | 91 |
multi fate stem cell | 4.09e-12 | 91 |
autonomic neuron | 4.49e-11 | 9 |
stem cell | 4.53e-11 | 97 |
raphe nuclei neuron | 1.59e-09 | 3 |
striatum neuron | 1.94e-09 | 3 |
neuron of cerebral cortex | 1.50e-07 | 6 |