FFCP PHASE1:Mm9::chrX:133366557..133366580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=212 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:133366557..133366580,+ | |||
|description=CAGE_peak_at_chrX:133366557..133366580,+ | |description=CAGE_peak_at_chrX:133366557..133366580,+ | ||
|id=chrX:133366557..133366580,+ | |id=chrX:133366557..133366580,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.10e-11!44;CL:0000133!3.10e-11!44;CL:0000540!8.05e-11!33;CL:0000047!8.05e-11!33;CL:0000031!8.05e-11!33;CL:0000404!8.05e-11!33;CL:0002319!1.15e-10!43;CL:0000107!7.30e-09!9;CL:0000393!3.73e-08!39;CL:0000211!3.73e-08!39;CL:0000055!4.14e-08!50 | |ontology_enrichment_celltype=CL:0000221!3.10e-11!44;CL:0000133!3.10e-11!44;CL:0000540!8.05e-11!33;CL:0000047!8.05e-11!33;CL:0000031!8.05e-11!33;CL:0000404!8.05e-11!33;CL:0002319!1.15e-10!43;CL:0000107!7.30e-09!9;CL:0000393!3.73e-08!39;CL:0000211!3.73e-08!39;CL:0000055!4.14e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.55e-17,33;CL:0000047,5.55e-17,33;CL:0000031,5.55e-17,33;CL:0000404,5.55e-17,33;CL:0002319,1.98e-16,43;CL:0000221,6.26e-16,44;CL:0000133,6.26e-16,44;CL:0000107,5.59e-14,9;CL:0000393,1.25e-13,39;CL:0000211,1.25e-13,39;CL:0002321,4.96e-08,70;CL:0002610,7.25e-08,3;CL:0002614,1.13e-07,3;CL:0000117,1.37e-07,23;CL:0000337,1.37e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.97e-26!75;UBERON:0001016!1.97e-26!75;UBERON:0001017!1.13e-24!73;UBERON:0005743!1.13e-24!73;UBERON:0004121!1.77e-23!102;UBERON:0000924!1.77e-23!102;UBERON:0006601!1.77e-23!102;UBERON:0000033!1.91e-14!63;UBERON:0002346!2.43e-14!71;UBERON:0003075!2.43e-14!71;UBERON:0007284!2.43e-14!71;UBERON:0001049!3.36e-14!52;UBERON:0005068!3.36e-14!52;UBERON:0006241!3.36e-14!52;UBERON:0007135!3.36e-14!52;UBERON:0000955!3.98e-14!50;UBERON:0006238!3.98e-14!50;UBERON:0002616!2.32e-13!49;UBERON:0002021!4.97e-12!10;UBERON:0000411!4.97e-12!10;UBERON:0001950!4.97e-12!10;UBERON:0002020!3.21e-11!34;UBERON:0000010!1.41e-10!11;UBERON:0002410!7.30e-09!9;UBERON:0003056!1.22e-08!49;UBERON:0002791!1.39e-08!29;UBERON:0003528!1.39e-08!29;UBERON:0001893!1.39e-08!29;UBERON:0003080!1.72e-08!40;UBERON:0002298!2.04e-08!6;UBERON:0002619!3.18e-08!17;UBERON:0002780!8.70e-08!39;UBERON:0001890!8.70e-08!39;UBERON:0006240!8.70e-08!39;UBERON:0007811!1.08e-07!86;UBERON:0003076!2.15e-07!12;UBERON:0003057!2.15e-07!12;UBERON:0000956!3.56e-07!21;UBERON:0001869!3.56e-07!21;UBERON:0000203!3.56e-07!21;UBERON:0000153!9.75e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-43,75;UBERON:0001017,1.32e-40,73;UBERON:0004121,3.31e-34,95;UBERON:0000924,3.31e-34,95;UBERON:0006601,3.31e-34,95;UBERON:0000073,1.86e-28,54;UBERON:0002346,2.12e-25,64;UBERON:0003075,2.12e-25,64;UBERON:0007284,2.12e-25,64;UBERON:0001049,5.03e-25,52;UBERON:0005068,5.03e-25,52;UBERON:0006241,5.03e-25,52;UBERON:0007135,5.03e-25,52;UBERON:0010371,2.85e-21,73;UBERON:0000955,6.95e-20,47;UBERON:0006238,6.95e-20,47;UBERON:0002020,1.17e-19,34;UBERON:0002021,2.29e-19,10;UBERON:0000411,2.29e-19,10;UBERON:0001950,2.29e-19,10;UBERON:0002616,1.24e-18,46;UBERON:0000010,6.81e-17,11;UBERON:0010314,3.20e-15,92;UBERON:0003528,8.02e-15,29;UBERON:0002791,8.02e-15,29;UBERON:0001893,8.02e-15,29;UBERON:0003080,2.08e-14,40;UBERON:0002410,5.59e-14,9;UBERON:0002780,3.56e-13,39;UBERON:0001890,3.56e-13,39;UBERON:0006240,3.56e-13,39;UBERON:0002619,1.28e-12,17;UBERON:0003076,2.12e-12,12;UBERON:0003057,2.12e-12,12;UBERON:0003056,3.71e-12,49;UBERON:0000956,1.45e-11,21;UBERON:0001869,1.45e-11,21;UBERON:0000203,1.45e-11,21;UBERON:0011216,6.34e-11,194;UBERON:0002950,2.17e-09,4;UBERON:0001891,2.17e-09,4;UBERON:0009616,2.17e-09,4;UBERON:0010286,2.17e-09,4;UBERON:0002240,2.35e-08,6;UBERON:0005174,2.35e-08,6;UBERON:0001137,2.35e-08,6;UBERON:0004684,7.25e-08,3;UBERON:0002275,7.25e-08,3;UBERON:0002038,1.13e-07,3;UBERON:0009663,1.13e-07,3;UBERON:0009661,1.13e-07,3;UBERON:0000125,1.13e-07,3;UBERON:0002308,1.13e-07,3;UBERON:0000025,1.49e-07,114 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,7.42692559449889,11.0434270475807,0,0.0958454710182364,0,38.540558349786,30.2618991261895,39.3232725135983,0,0,0,32.1060448851588,19.1339287410771,26.1285003698345,6.48182888042069,3.41692033917847,0,2.42323818666189,3.47629176491213,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,1.75668478206928,17.1746299587033,0,0,0,0,8.38827580667007,6.8625090422794,0,2.9550134432687,5.37002460393694,10.5971902725376,17.1975738851823,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,2.84573707812917,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0,4.6263788684108,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8073507389501,24.3800308111783,0,0,1.26203287766503,1.95219372148319,1.93881057959519,2.62865677747807,5.34716817797746,2.54768877709949,1.61924280669958,2.63030272120181,1.58115111178609,3.85585579706168,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.484393280087717,0.0603129249281559,0.119372344003136,0,0,23.9198639593557,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1187960654267,17.9526842237799,14.3223878359849,8.59265911718438,16.4419804744954,12.0863023582352,7.42524750254986,7.65546045481175,7.25027854374727,6.73088405277366,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0.765153328275374,0.661774257358546,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,7.42692559449889,11.0434270475807,0,0.0958454710182364,0,38.540558349786,30.2618991261895,39.3232725135983,0,0,0,32.1060448851588,19.1339287410771,26.1285003698345,6.48182888042069,3.41692033917847,0,2.42323818666189,3.47629176491213,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0,0,0,0,1.75668478206928,17.1746299587033,0,0,0,0,8.38827580667007,6.8625090422794,0,2.9550134432687,5.37002460393694,10.5971902725376,17.1975738851823,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,2.84573707812917,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0,4.6263788684108,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8073507389501,24.3800308111783,0,0,1.26203287766503,1.95219372148319,1.93881057959519,2.62865677747807,5.34716817797746,2.54768877709949,1.61924280669958,2.63030272120181,1.58115111178609,3.85585579706168,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.484393280087717,0.0603129249281559,0.119372344003136,0,0,23.9198639593557,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1187960654267,17.9526842237799,14.3223878359849,8.59265911718438,16.4419804744954,12.0863023582352,7.42524750254986,7.65546045481175,7.25027854374727,6.73088405277366,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0.765153328275374,0.661774257358546,0.231867835620421 | ||
|short_description=p@chrX:133366557..133366580,+ | |short_description=p@chrX:133366557..133366580,+ | ||
}} | }} |
Latest revision as of 00:24, 6 August 2015
Short description: | p@chrX:133366557..133366580, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133366557..133366580, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.55e-17 | 33 |
neuronal stem cell | 5.55e-17 | 33 |
neuroblast | 5.55e-17 | 33 |
electrically signaling cell | 5.55e-17 | 33 |
neural cell | 1.98e-16 | 43 |
ectodermal cell | 6.26e-16 | 44 |
neurectodermal cell | 6.26e-16 | 44 |
autonomic neuron | 5.59e-14 | 9 |
electrically responsive cell | 1.25e-13 | 39 |
electrically active cell | 1.25e-13 | 39 |
embryonic cell | 4.96e-08 | 70 |
raphe nuclei neuron | 7.25e-08 | 3 |
neuron of the substantia nigra | 1.13e-07 | 3 |
CNS neuron (sensu Vertebrata) | 1.37e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.37e-07 | 23 |