FFCP PHASE1:Hg19::chr14:70233822..70233868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6430 | |EntrezGene=6430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |HGNC=10787 | ||
|TSSclassifier=strong | |||
|UniProt=Q13243,B4DUA4,G3V5K8,Q6FGE0 | |UniProt=Q13243,B4DUA4,G3V5K8,Q6FGE0 | ||
|association_with_transcript=0bp_to_ENST00000451983,ENST00000553369,ENST00000553548,ENST00000557154,ENST00000557337,ENST00000557435,NM_001039465,NM_006925,uc001xln.1,uc001xlo.2,uc001xlp.2,uc001xlq.2_5end | |association_with_transcript=0bp_to_ENST00000451983,ENST00000553369,ENST00000553548,ENST00000557154,ENST00000557337,ENST00000557435,NM_001039465,NM_006925,uc001xln.1,uc001xlo.2,uc001xlp.2,uc001xlq.2_5end | ||
|cluster_id=chr14:70233822..70233868,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_SRSF5_5end | |description=CAGE_peak_1_at_SRSF5_5end | ||
|id=chr14:70233822..70233868,+ | |id=chr14:70233822..70233868,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.99e-41!172;CL:0000566!2.99e-41!172;CL:0000738!1.37e-40!140;CL:0002032!1.09e-37!165;CL:0000837!1.09e-37!165;CL:0000988!2.64e-35!182;CL:0002031!1.79e-32!124;CL:0002087!4.45e-30!119;CL:0000763!2.23e-22!112;CL:0000049!2.23e-22!112;CL:0002057!7.97e-22!42;CL:0000766!2.81e-21!76;CL:0000860!4.15e-20!45;CL:0000557!2.68e-17!71;CL:0000839!4.91e-17!70;CL:0002009!1.63e-15!65;CL:0002194!1.71e-14!63;CL:0000576!1.71e-14!63;CL:0000040!1.71e-14!63;CL:0000559!1.71e-14!63;CL:0000542!5.03e-14!53;CL:0000051!5.03e-14!53;CL:0000838!5.03e-14!52;CL:0000791!4.31e-10!18;CL:0000789!4.31e-10!18;CL:0002420!4.31e-10!18;CL:0002419!4.31e-10!18;CL:0000790!4.31e-10!18;CL:0000084!3.26e-08!25;CL:0000827!3.26e-08!25;CL:0000625!3.07e-07!11;CL:0000236!6.06e-07!14;CL:0000094!6.26e-07!8 | |ontology_enrichment_celltype=CL:0000037!2.99e-41!172;CL:0000566!2.99e-41!172;CL:0000738!1.37e-40!140;CL:0002032!1.09e-37!165;CL:0000837!1.09e-37!165;CL:0000988!2.64e-35!182;CL:0002031!1.79e-32!124;CL:0002087!4.45e-30!119;CL:0000763!2.23e-22!112;CL:0000049!2.23e-22!112;CL:0002057!7.97e-22!42;CL:0000766!2.81e-21!76;CL:0000860!4.15e-20!45;CL:0000557!2.68e-17!71;CL:0000839!4.91e-17!70;CL:0002009!1.63e-15!65;CL:0002194!1.71e-14!63;CL:0000576!1.71e-14!63;CL:0000040!1.71e-14!63;CL:0000559!1.71e-14!63;CL:0000542!5.03e-14!53;CL:0000051!5.03e-14!53;CL:0000838!5.03e-14!52;CL:0000791!4.31e-10!18;CL:0000789!4.31e-10!18;CL:0002420!4.31e-10!18;CL:0002419!4.31e-10!18;CL:0000790!4.31e-10!18;CL:0000084!3.26e-08!25;CL:0000827!3.26e-08!25;CL:0000625!3.07e-07!11;CL:0000236!6.06e-07!14;CL:0000094!6.26e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.54e-16;33!CL:0002057;9.54e-16;33!CL:0000576;9.20e-13;48!CL:0000766;4.86e-11;69!CL:0002087;6.57e-11;104!CL:0000473;2.04e-10;39!CL:0000234;2.04e-10;39!CL:0000791;4.35e-10;18!CL:0000789;4.35e-10;18!CL:0002419;4.35e-10;18!CL:0000738;5.88e-09;136!CL:0000542;8.90e-09;53!CL:0000084;3.31e-08;25!CL:0000763;1.79e-07;100!CL:0000625;3.08e-07;11!CL:0000094;6.26e-07;8!CL:0000236;6.41e-07;13!CL:0000988;7.22e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.78e-42,168;CL:0000738,7.39e-42,136;CL:0002032,1.10e-38,161;CL:0000837,1.10e-38,161;CL:0000988,5.63e-37,177;CL:0002031,1.20e-33,120;CL:0002087,3.19e-31,115;CL:0000763,2.64e-23,108;CL:0000049,2.64e-23,108;CL:0000766,1.42e-22,72;CL:0000860,7.97e-22,42;CL:0002057,7.97e-22,42;CL:0000557,1.94e-18,67;CL:0000839,3.57e-18,66;CL:0000473,6.05e-18,48;CL:0000234,6.05e-18,48;CL:0002009,1.24e-16,61;CL:0002194,1.42e-15,59;CL:0000576,1.42e-15,59;CL:0000040,1.42e-15,59;CL:0000559,1.42e-15,59;CL:0000542,5.03e-14,53;CL:0000051,5.03e-14,53;CL:0000838,5.03e-14,52;CL:0000791,4.31e-10,18;CL:0000789,4.31e-10,18;CL:0002420,4.31e-10,18;CL:0002419,4.31e-10,18;CL:0000790,4.31e-10,18;CL:0000084,3.26e-08,25;CL:0000827,3.26e-08,25;CL:0000625,3.07e-07,11;CL:0000236,6.06e-07,14;CL:0000094,6.26e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.00e-16;42!CL:0000790;4.35e-10;18!CL:0000051;8.90e-09;53!CL:0000049;6.31e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.39e-18!102;UBERON:0003061!2.39e-18!102;UBERON:0002193!9.79e-15!112;UBERON:0002371!3.50e-14!80;UBERON:0001474!8.26e-14!86;UBERON:0007023!1.00e-12!115;UBERON:0004765!9.39e-11!101;UBERON:0001434!9.39e-11!101;UBERON:0001049!2.59e-09!57;UBERON:0005068!2.59e-09!57;UBERON:0006241!2.59e-09!57;UBERON:0007135!2.59e-09!57;UBERON:0002780!6.97e-09!41;UBERON:0001890!6.97e-09!41;UBERON:0006240!6.97e-09!41;UBERON:0002405!8.58e-09!115;UBERON:0003080!2.06e-08!42;UBERON:0002020!7.83e-07!34;UBERON:0003528!7.83e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.40e-19,98;UBERON:0003061,3.40e-19,98;UBERON:0002193,2.28e-15,108;UBERON:0002371,5.04e-15,76;UBERON:0001474,1.42e-14,82;UBERON:0004765,1.87e-12,90;UBERON:0007023,1.88e-12,114;UBERON:0002405,7.83e-12,93;UBERON:0001434,2.49e-10,100;UBERON:0001049,9.97e-10,56;UBERON:0005068,9.97e-10,56;UBERON:0006241,9.97e-10,56;UBERON:0007135,9.97e-10,56;UBERON:0000073,4.97e-09,53;UBERON:0002616,4.97e-09,53;UBERON:0002780,6.97e-09,41;UBERON:0001890,6.97e-09,41;UBERON:0003080,6.97e-09,41;UBERON:0006240,6.97e-09,41;UBERON:0003528,7.83e-07,34;UBERON:0002020,7.83e-07,34 | |||
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| ||
|short_description=p1@SRSF5 | |short_description=p1@SRSF5 | ||
}} | }} |
Latest revision as of 19:28, 15 September 2015
Short description: | p1@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF5_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000451983, ENST00000553369, ENST00000553548, ENST00000557154, ENST00000557337, ENST00000557435, NM_001039465, NM_006925, uc001xln.1, uc001xlo.2, uc001xlp.2, uc001xlq.2_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | Q13243B4DUA4G3V5K8Q6FGE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.40e-19 | 98 |
blood island | 3.40e-19 | 98 |
hemolymphoid system | 2.28e-15 | 108 |
bone marrow | 5.04e-15 | 76 |
bone element | 1.42e-14 | 82 |
skeletal element | 1.87e-12 | 90 |
adult organism | 1.88e-12 | 114 |
immune system | 7.83e-12 | 93 |
skeletal system | 2.49e-10 | 100 |
neural tube | 9.97e-10 | 56 |
neural rod | 9.97e-10 | 56 |
future spinal cord | 9.97e-10 | 56 |
neural keel | 9.97e-10 | 56 |
regional part of nervous system | 4.97e-09 | 53 |
regional part of brain | 4.97e-09 | 53 |
regional part of forebrain | 6.97e-09 | 41 |
forebrain | 6.97e-09 | 41 |
anterior neural tube | 6.97e-09 | 41 |
future forebrain | 6.97e-09 | 41 |
brain grey matter | 7.83e-07 | 34 |
gray matter | 7.83e-07 | 34 |