FFCP PHASE1:Hg19::chr5:146889596..146889607,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:146889596..146889607,-
|short_description=p13@DPYSL3
|description=CAGE_peak_13_at_DPYSL3_5end
|association_with_transcript=11bp_to_ENST00000343218,NM_00119...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=B3SXQ8,Q14195,Q6DEN2 | |UniProt=B3SXQ8,Q14195,Q6DEN2 | ||
|association_with_transcript=11bp_to_ENST00000343218,NM_001197294_5end | |||
|cluster_id=chr5:146889596..146889607,- | |||
|coexpression_cluster_id=C1527 | |||
|description=CAGE_peak_13_at_DPYSL3_5end | |||
|id=chr5:146889596..146889607,- | |||
|ontology_enrichment_celltype=CL:0000055!1.39e-23!180;CL:0000359!3.50e-15!32;CL:0000192!2.08e-13!42;CL:0000514!2.08e-13!42;CL:0000393!1.72e-12!60;CL:0000211!1.72e-12!60;CL:0000183!1.35e-11!59;CL:0000187!7.87e-11!54;CL:0000680!2.23e-10!57;CL:0000056!2.23e-10!57;CL:0000355!2.23e-10!57;CL:0000057!2.95e-09!75;CL:0002319!4.76e-08!25;CL:0000222!6.18e-08!119;CL:0000133!3.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.81e-17;32!CL:0000192;1.78e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.79e-18,32;CL:0000192,7.06e-13,43;CL:0000514,7.06e-13,43;CL:0000393,7.39e-11,61;CL:0000211,7.39e-11,61;CL:0000187,4.09e-10,55;CL:0000680,3.41e-09,58;CL:0000056,3.41e-09,58;CL:0000355,3.41e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.78e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!1.79e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.50e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;3.71e-18;42!UBERON:0003509;3.71e-18;42!UBERON:0004572;3.71e-18;42!UBERON:0004573;2.63e-17;33!UBERON:0004571;2.63e-17;33!UBERON:0007500;1.52e-11;56!UBERON:0001981;1.52e-11;56!UBERON:0004537;1.52e-11;56!UBERON:0000947;1.07e-10;21!UBERON:0010191;1.07e-10;21!UBERON:0000992;1.15e-08;13!UBERON:0003914;1.94e-08;74!UBERON:0000055;5.31e-08;65!UBERON:0002049;5.25e-07;75!UBERON:0007798;5.25e-07;75!UBERON:0002118;6.61e-07;5 | |||
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| ||
|short_description=p13@DPYSL3 | |||
}} | }} |
Latest revision as of 22:17, 15 September 2015
Short description: | p13@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DPYSL3_5end |
Coexpression cluster: | C1527_glioblastoma_Lens_mesothelioma_mesenchymal_granulosa_Ciliary_Smooth |
Association with transcript: | 11bp_to_ENST00000343218, NM_001197294_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | B3SXQ8Q14195Q6DEN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.79e-18 | 32 |
smooth muscle cell | 7.06e-13 | 43 |
smooth muscle myoblast | 7.06e-13 | 43 |
electrically responsive cell | 7.39e-11 | 61 |
electrically active cell | 7.39e-11 | 61 |
muscle cell | 4.09e-10 | 55 |
muscle precursor cell | 3.41e-09 | 58 |
myoblast | 3.41e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.41e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.50e-09 | 14 |