FFCP PHASE1:Hg19::chr12:10365466..10365547,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23710 | |EntrezGene=23710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4068 | |HGNC=4068 | ||
|TSSclassifier=strong | |||
|UniProt=F5H007,F5GX12,B4E0Y7,Q9H0R8 | |UniProt=F5H007,F5GX12,B4E0Y7,Q9H0R8 | ||
|association_with_transcript=0bp_to_ENST00000537201,ENST00000540424,ENST00000541453,ENST00000543602,ENST00000545047,ENST00000545887,NM_031412,uc001qxs.2,uc001qxt.2,uc010shb.1_5end | |association_with_transcript=0bp_to_ENST00000537201,ENST00000540424,ENST00000541453,ENST00000543602,ENST00000545047,ENST00000545887,NM_031412,uc001qxs.2,uc001qxt.2,uc010shb.1_5end | ||
|cluster_id=chr12:10365466..10365547,+ | |||
|description=CAGE_peak_1_at_GABARAPL1_5end | |description=CAGE_peak_1_at_GABARAPL1_5end | ||
|id=chr12:10365466..10365547,+ | |id=chr12:10365466..10365547,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.30e-16!42;CL:0000860!2.42e-15!45;CL:0000766!2.59e-12!76;CL:0000839!2.79e-09!70;CL:0002194!4.42e-09!63;CL:0000576!4.42e-09!63;CL:0000040!4.42e-09!63;CL:0000559!4.42e-09!63;CL:0002009!1.12e-08!65;CL:0000557!6.84e-08!71 | |ontology_enrichment_celltype=CL:0002057!2.30e-16!42;CL:0000860!2.42e-15!45;CL:0000766!2.59e-12!76;CL:0000839!2.79e-09!70;CL:0002194!4.42e-09!63;CL:0000576!4.42e-09!63;CL:0000040!4.42e-09!63;CL:0000559!4.42e-09!63;CL:0002009!1.12e-08!65;CL:0000557!6.84e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.85e-14;33!CL:0002057;8.85e-14;33!CL:0000473;1.42e-10;39!CL:0000234;1.42e-10;39!CL:0000576;3.45e-08;48!CL:0000766;9.30e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;8.85e-14;33!CL:0002057;8.85e-14;33!CL:0000473;1.42e-10;39!CL:0000234;1.42e-10;39!CL:0000576;3.45e-08;48!CL:0000766;9.30e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.29e-16,42;CL:0002057,2.29e-16,42;CL:0000473,4.52e-15,48;CL:0000234,4.52e-15,48;CL:0000766,7.25e-13,72;CL:0000839,1.01e-09,66;CL:0002194,1.46e-09,59;CL:0000576,1.46e-09,59;CL:0000040,1.46e-09,59;CL:0000559,1.46e-09,59;CL:0002009,4.06e-09,61;CL:0000557,3.00e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-12;42 | |ontology_enrichment_development_v019=CL:0002057;3.19e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-36!115;UBERON:0001049!5.30e-20!57;UBERON:0005068!5.30e-20!57;UBERON:0006241!5.30e-20!57;UBERON:0007135!5.30e-20!57;UBERON:0002616!1.03e-18!59;UBERON:0005743!5.65e-17!86;UBERON:0001017!9.83e-17!82;UBERON:0000955!1.83e-16!69;UBERON:0006238!1.83e-16!69;UBERON:0003080!6.16e-16!42;UBERON:0003075!7.55e-16!86;UBERON:0007284!7.55e-16!86;UBERON:0002780!9.99e-16!41;UBERON:0001890!9.99e-16!41;UBERON:0006240!9.99e-16!41;UBERON:0002346!9.12e-15!90;UBERON:0000468!3.10e-13!659;UBERON:0000073!5.22e-13!94;UBERON:0001016!5.22e-13!94;UBERON:0000062!5.27e-13!511;UBERON:0002020!2.14e-12!34;UBERON:0003528!2.14e-12!34;UBERON:0001893!2.59e-12!34;UBERON:0002791!9.87e-12!33;UBERON:0001869!1.13e-11!32;UBERON:0003056!1.54e-11!61;UBERON:0000467!1.15e-10!625;UBERON:0000480!1.86e-10!626;UBERON:0002619!3.06e-10!22;UBERON:0001950!2.98e-09!20;UBERON:0000033!1.74e-08!123;UBERON:0000922!2.52e-08!612;UBERON:0000956!3.24e-08!25;UBERON:0000203!3.24e-08!25;UBERON:0000153!5.47e-08!129;UBERON:0007811!5.47e-08!129;UBERON:0000923!1.61e-07!604;UBERON:0005291!1.61e-07!604;UBERON:0006598!1.61e-07!604;UBERON:0002532!1.61e-07!604;UBERON:0002050!1.96e-07!605;UBERON:0005423!1.96e-07!605;UBERON:0000025!3.08e-07!194;UBERON:0004111!4.07e-07!241 | |ontology_enrichment_uberon=UBERON:0007023!1.06e-36!115;UBERON:0001049!5.30e-20!57;UBERON:0005068!5.30e-20!57;UBERON:0006241!5.30e-20!57;UBERON:0007135!5.30e-20!57;UBERON:0002616!1.03e-18!59;UBERON:0005743!5.65e-17!86;UBERON:0001017!9.83e-17!82;UBERON:0000955!1.83e-16!69;UBERON:0006238!1.83e-16!69;UBERON:0003080!6.16e-16!42;UBERON:0003075!7.55e-16!86;UBERON:0007284!7.55e-16!86;UBERON:0002780!9.99e-16!41;UBERON:0001890!9.99e-16!41;UBERON:0006240!9.99e-16!41;UBERON:0002346!9.12e-15!90;UBERON:0000468!3.10e-13!659;UBERON:0000073!5.22e-13!94;UBERON:0001016!5.22e-13!94;UBERON:0000062!5.27e-13!511;UBERON:0002020!2.14e-12!34;UBERON:0003528!2.14e-12!34;UBERON:0001893!2.59e-12!34;UBERON:0002791!9.87e-12!33;UBERON:0001869!1.13e-11!32;UBERON:0003056!1.54e-11!61;UBERON:0000467!1.15e-10!625;UBERON:0000480!1.86e-10!626;UBERON:0002619!3.06e-10!22;UBERON:0001950!2.98e-09!20;UBERON:0000033!1.74e-08!123;UBERON:0000922!2.52e-08!612;UBERON:0000956!3.24e-08!25;UBERON:0000203!3.24e-08!25;UBERON:0000153!5.47e-08!129;UBERON:0007811!5.47e-08!129;UBERON:0000923!1.61e-07!604;UBERON:0005291!1.61e-07!604;UBERON:0006598!1.61e-07!604;UBERON:0002532!1.61e-07!604;UBERON:0002050!1.96e-07!605;UBERON:0005423!1.96e-07!605;UBERON:0000025!3.08e-07!194;UBERON:0004111!4.07e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.16e-11;41!UBERON:0001890;2.16e-11;41!UBERON:0000073;6.25e-11;53!UBERON:0002616;6.25e-11;53!UBERON:0001893;8.06e-11;34!UBERON:0003528;1.25e-10;34!UBERON:0002020;1.25e-10;34!UBERON:0001869;1.67e-10;32!UBERON:0002791;2.71e-10;32!UBERON:0007023;2.91e-10;114!UBERON:0002619;3.04e-10;22!UBERON:0001950;2.93e-09;20!UBERON:0000956;3.23e-08;25!UBERON:0000203;3.23e-08;25!UBERON:0001017;3.48e-08;75!UBERON:0000955;3.58e-08;68 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.16e-11;41!UBERON:0001890;2.16e-11;41!UBERON:0000073;6.25e-11;53!UBERON:0002616;6.25e-11;53!UBERON:0001893;8.06e-11;34!UBERON:0003528;1.25e-10;34!UBERON:0002020;1.25e-10;34!UBERON:0001869;1.67e-10;32!UBERON:0002791;2.71e-10;32!UBERON:0007023;2.91e-10;114!UBERON:0002619;3.04e-10;22!UBERON:0001950;2.93e-09;20!UBERON:0000956;3.23e-08;25!UBERON:0000203;3.23e-08;25!UBERON:0001017;3.48e-08;75!UBERON:0000955;3.58e-08;68 | ||
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| ||
|short_description=p1@GABARAPL1 | |short_description=p1@GABARAPL1 | ||
}} | }} |
Latest revision as of 22:24, 15 September 2015
Short description: | p1@GABARAPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GABARAPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537201, ENST00000540424, ENST00000541453, ENST00000543602, ENST00000545047, ENST00000545887, NM_031412, uc001qxs.2, uc001qxt.2, uc010shb.1_5end |
EntrezGene: | GABARAPL1 |
HGNC: | 4068 |
UniProt: | F5H007F5GX12B4E0Y7Q9H0R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.29e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.29e-16 | 42 |
defensive cell | 4.52e-15 | 48 |
phagocyte | 4.52e-15 | 48 |
myeloid leukocyte | 7.25e-13 | 72 |
myeloid lineage restricted progenitor cell | 1.01e-09 | 66 |
monopoietic cell | 1.46e-09 | 59 |
monocyte | 1.46e-09 | 59 |
monoblast | 1.46e-09 | 59 |
promonocyte | 1.46e-09 | 59 |
macrophage dendritic cell progenitor | 4.06e-09 | 61 |
granulocyte monocyte progenitor cell | 3.00e-08 | 67 |