FFCP PHASE1:Hg19::chr12:10366223..10366251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23710 | |EntrezGene=23710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4068 | |HGNC=4068 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000545290_5end | |association_with_transcript=0bp_to_ENST00000545290_5end | ||
|cluster_id=chr12:10366223..10366251,+ | |||
|description=CAGE_peak_4_at_GABARAPL1_5end | |description=CAGE_peak_4_at_GABARAPL1_5end | ||
|id=chr12:10366223..10366251,+ | |id=chr12:10366223..10366251,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.16e-23!76;CL:0002057!2.58e-20!42;CL:0000860!6.09e-20!45;CL:0002194!1.38e-17!63;CL:0000576!1.38e-17!63;CL:0000040!1.38e-17!63;CL:0000559!1.38e-17!63;CL:0000839!2.79e-17!70;CL:0000557!5.49e-17!71;CL:0002009!1.67e-16!65;CL:0000738!1.46e-12!140;CL:0000763!2.49e-09!112;CL:0000049!2.49e-09!112;CL:0002087!7.00e-09!119;CL:0000134!3.11e-08!358;CL:0002031!3.97e-08!124;CL:0002320!8.22e-08!365;CL:0000048!2.25e-07!430;CL:0000723!6.38e-07!436;CL:0000094!8.25e-07!8 | |ontology_enrichment_celltype=CL:0000766!1.16e-23!76;CL:0002057!2.58e-20!42;CL:0000860!6.09e-20!45;CL:0002194!1.38e-17!63;CL:0000576!1.38e-17!63;CL:0000040!1.38e-17!63;CL:0000559!1.38e-17!63;CL:0000839!2.79e-17!70;CL:0000557!5.49e-17!71;CL:0002009!1.67e-16!65;CL:0000738!1.46e-12!140;CL:0000763!2.49e-09!112;CL:0000049!2.49e-09!112;CL:0002087!7.00e-09!119;CL:0000134!3.11e-08!358;CL:0002031!3.97e-08!124;CL:0002320!8.22e-08!365;CL:0000048!2.25e-07!430;CL:0000723!6.38e-07!436;CL:0000094!8.25e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.74e-22;33!CL:0002057;3.74e-22;33!CL:0000473;3.99e-20;39!CL:0000234;3.99e-20;39!CL:0000766;6.04e-16;69!CL:0000576;1.23e-15;48!CL:0000094;7.59e-10;8 | |ontology_enrichment_celltype_v019=CL:0000860;3.74e-22;33!CL:0002057;3.74e-22;33!CL:0000473;3.99e-20;39!CL:0000234;3.99e-20;39!CL:0000766;6.04e-16;69!CL:0000576;1.23e-15;48!CL:0000094;7.59e-10;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.96e-37,72;CL:0000473,7.46e-32,48;CL:0000234,7.46e-32,48;CL:0000860,1.23e-30,42;CL:0002057,1.23e-30,42;CL:0000839,9.79e-28,66;CL:0002194,1.01e-27,59;CL:0000576,1.01e-27,59;CL:0000040,1.01e-27,59;CL:0000559,1.01e-27,59;CL:0000557,4.90e-27,67;CL:0000738,1.96e-26,136;CL:0002009,3.17e-26,61;CL:0002087,2.31e-20,115;CL:0002031,5.73e-19,120;CL:0000763,7.77e-19,108;CL:0000049,7.77e-19,108;CL:0000037,7.16e-17,168;CL:0002032,1.10e-15,161;CL:0000837,1.10e-15,161;CL:0000988,9.66e-15,177;CL:0000134,1.34e-12,354;CL:0002320,1.13e-11,361;CL:0000094,7.33e-10,8;CL:0000219,1.62e-09,386;CL:0000048,7.10e-08,427;CL:0002393,1.17e-07,9;CL:0002397,1.17e-07,9;CL:0000723,2.55e-07,433;CL:0000034,5.34e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-22;42 | |ontology_enrichment_development_v019=CL:0002057;1.81e-22;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.60e-14!80;UBERON:0001474!1.69e-13!86;UBERON:0004765!6.96e-11!101;UBERON:0001434!6.96e-11!101;UBERON:0002390!3.61e-10!102;UBERON:0003061!3.61e-10!102;UBERON:0002405!3.97e-09!115;UBERON:0002193!4.58e-09!112;UBERON:0002780!7.89e-09!41;UBERON:0001890!7.89e-09!41;UBERON:0006240!7.89e-09!41;UBERON:0001049!1.99e-08!57;UBERON:0005068!1.99e-08!57;UBERON:0006241!1.99e-08!57;UBERON:0007135!1.99e-08!57;UBERON:0001869!2.49e-08!32;UBERON:0002616!2.55e-08!59;UBERON:0003080!3.20e-08!42;UBERON:0000955!4.97e-08!69;UBERON:0006238!4.97e-08!69;UBERON:0002204!5.57e-08!167;UBERON:0001893!1.10e-07!34;UBERON:0002020!2.62e-07!34;UBERON:0003528!2.62e-07!34;UBERON:0002619!3.16e-07!22;UBERON:0002791!3.50e-07!33;UBERON:0002384!8.80e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!3.60e-14!80;UBERON:0001474!1.69e-13!86;UBERON:0004765!6.96e-11!101;UBERON:0001434!6.96e-11!101;UBERON:0002390!3.61e-10!102;UBERON:0003061!3.61e-10!102;UBERON:0002405!3.97e-09!115;UBERON:0002193!4.58e-09!112;UBERON:0002780!7.89e-09!41;UBERON:0001890!7.89e-09!41;UBERON:0006240!7.89e-09!41;UBERON:0001049!1.99e-08!57;UBERON:0005068!1.99e-08!57;UBERON:0006241!1.99e-08!57;UBERON:0007135!1.99e-08!57;UBERON:0001869!2.49e-08!32;UBERON:0002616!2.55e-08!59;UBERON:0003080!3.20e-08!42;UBERON:0000955!4.97e-08!69;UBERON:0006238!4.97e-08!69;UBERON:0002204!5.57e-08!167;UBERON:0001893!1.10e-07!34;UBERON:0002020!2.62e-07!34;UBERON:0003528!2.62e-07!34;UBERON:0002619!3.16e-07!22;UBERON:0002791!3.50e-07!33;UBERON:0002384!8.80e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.56e-12;22!UBERON:0001950;9.59e-12;20!UBERON:0001869;3.65e-11;32!UBERON:0001893;1.52e-10;34!UBERON:0002791;4.85e-10;32!UBERON:0003528;6.66e-10;34!UBERON:0002020;6.66e-10;34!UBERON:0000956;9.70e-10;25!UBERON:0000203;9.70e-10;25!UBERON:0002780;4.91e-09;41!UBERON:0001890;4.91e-09;41!UBERON:0000200;1.80e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002619;7.56e-12;22!UBERON:0001950;9.59e-12;20!UBERON:0001869;3.65e-11;32!UBERON:0001893;1.52e-10;34!UBERON:0002791;4.85e-10;32!UBERON:0003528;6.66e-10;34!UBERON:0002020;6.66e-10;34!UBERON:0000956;9.70e-10;25!UBERON:0000203;9.70e-10;25!UBERON:0002780;4.91e-09;41!UBERON:0001890;4.91e-09;41!UBERON:0000200;1.80e-07;6 | ||
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|phase1_expression=1.63510541343501,0.642301571672949,3.10099689011137,1.0007329835313,2.23480547213644,1.74467704820074,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.861847406537515,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,15.3412067971073,11.8987113410136,8.3600706590681,0,0,0,0,0,0.587200878669695,17.1738576644882,15.8430113501412,7.59538047505481,0,0.32389366601898,0.257575567634187,3.05336301437086,1.13362783106643,0.970336244751265,3.0215774797739,6.16751832032739,4.64559556342655,8.05538698502021,5.63553554364021,7.56743135643473,4.13694816883942,3.87290810150296,1.35426486594342,4.51781614902251,3.0019676506363,7.41587498668779,7.03992952453076,6.41858054152187,5.11469700639233,1.64925650093358,6.18337338627059,5.11469700639233,3.19230162491442,3.40431134814684,0,7.03496262718881,10.429658368404,10.4250645458456,1.81619850790011,3.31449872388808,3.79754864929061,2.32380814943136,5.31510749912609,1.25795187305026,5.61643155732475,2.85336096398862,2.08943262706204,1.99508920618874,1.19350006319454,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,6.1655941927969,0,3.73748563216283,3.93010762749165,4.31763147898969,1.00311897234407,0.977766799900771,1.4203434172042,0,0.557052284425868,2.65145316727353,1.55073726208535,0.541607727530031,0.25618263945135,0.650296737799391,0,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0.226618685395132,2.68254345521345,1.37450978193052,0.759059076058509,1.91139248594458,0,1.90090408889675,1.20460095262218,0.76791966692651,0,0.947109008176067,0,15.5237192283044,20.058014683763,8.39981542520234,0,0.670700859703636,0,0,1.00267582127178,0.579386075843295,0.795285947051099,0.486634870302636,0.567208902984407,1.55210578223795,1.05401742831751,2.35762335895883,0,0,3.24547393654683,2.61194605948901,3.0580330919339,2.38490624305342,1.71598473234038,0.371457501329565,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,25.038279312852,23.2668158488995,0,1.49091585508596,0.633152558322899,1.45650098894541,0.573673241497627,0.709336764396714,1.12135520028461,1.06748995729705,0,0.311211035399766,0.404132016209064,0.326923806226917,0.605429710579726,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0,1.82032272387605,0.718618141816238,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,1.25572744982203,0.85422955527427,1.27159140695737,0.600182192168805,1.44273540933814,1.54584324027377,0.744467425326359,0.506328996723799,0.292311015483596,0.504867548488229,1.28869858099219,0.80823028409406,3.90510551768276,1.20902517873168,0.508681776931463,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0,0,3.12899064659632,0.643240938192885,1.38134921352481,2.3218396401599,0.721879481669586,0.473227200159376,0.674338760312407,1.20505514941741,0.772057809126758,1.08939722046203,2.13543557199987,1.34831308160164,1.17732879075208,0.769494313892781,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.686271241194102,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,0,0.34779121492523,1.99594780200897,0,0,0.570762456703795,0,0,1.23108503043699,5.85010662848094,1.33768046059855,0,0.16798212819886,0,0,0.290633938513962,0.383382679165211,1.47798971368783,0.352193736052904,1.65862492432618,2.45003920808834,1.38866676769018,0,0.381988425558278,0,0,0.205654985406647,1.50171528921959,0.285826432630578,0.112131084345361,0,0.22001485746285,1.03417372606222,0,0,3.19125739901845,2.08014873822732,0.257207374262142,0,0.266422179016099,1.14382394926518,0.542621605391443,0,0.65147236858747,0.355391948742546,0.791951872933429,0.904318131178758,2.61460037580088,2.19940580600526,1.2162378064119,1.00451418286425,0,0.479249710983165,0,0,1.15825045334063,0.410952645100767,0.179060963239896,0.224170287987055,11.4277840917118,10.5657511681163,8.47064039446339,0.508189248444927,0,0,0,0.637938751653163,5.99205619157746,8.97484377612075,5.8018171881045,0.24538298343828,0,0.271265023699736,0.415941723061614,0.356857977594324,0.157702415033935,0.234282829985426,1.80567659836631,2.27407504055985,0,0,0.737476674166813,0.260650843404249,0.391602314925481,0.686286847621712,4.34212854858063,10.138567438475,1.70764092485511,0,0,0.604780586659361,3.96972492510043,1.68808170616869,1.68396056659844,3.33161788064823,0,2.41280881715411,0,0.308419387605311,1.42049380250502,0.328508624055237,0,0.464841513839837,0.241718899183244,0.802025881213139,0.368323955743585,1.03333003348146,1.0925470080403,0.917870904715969,0.451199612907412,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0.170093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| ||
|short_description=p4@GABARAPL1 | |short_description=p4@GABARAPL1 | ||
}} | }} |
Latest revision as of 22:35, 15 September 2015
Short description: | p4@GABARAPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GABARAPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545290_5end |
EntrezGene: | GABARAPL1 |
HGNC: | 4068 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.87e-22 | 76 |
bone element | 3.61e-21 | 82 |
hematopoietic system | 7.00e-19 | 98 |
blood island | 7.00e-19 | 98 |
skeletal element | 1.22e-17 | 90 |
immune system | 7.90e-17 | 93 |
hemolymphoid system | 3.98e-16 | 108 |
skeletal system | 1.18e-15 | 100 |
regional part of forebrain | 5.56e-13 | 41 |
forebrain | 5.56e-13 | 41 |
anterior neural tube | 5.56e-13 | 41 |
future forebrain | 5.56e-13 | 41 |
cerebral hemisphere | 2.49e-12 | 32 |
regional part of cerebral cortex | 1.06e-11 | 22 |
neocortex | 1.35e-11 | 20 |
telencephalon | 3.77e-11 | 34 |
regional part of telencephalon | 6.56e-11 | 32 |
regional part of nervous system | 6.58e-11 | 53 |
regional part of brain | 6.58e-11 | 53 |
connective tissue | 7.95e-11 | 371 |
brain grey matter | 1.20e-10 | 34 |
gray matter | 1.20e-10 | 34 |
neural tube | 8.60e-10 | 56 |
neural rod | 8.60e-10 | 56 |
future spinal cord | 8.60e-10 | 56 |
neural keel | 8.60e-10 | 56 |
cerebral cortex | 1.29e-09 | 25 |
pallium | 1.29e-09 | 25 |
brain | 3.16e-08 | 68 |
future brain | 3.16e-08 | 68 |
pre-chordal neural plate | 1.28e-07 | 61 |
gyrus | 1.99e-07 | 6 |
neural plate | 5.68e-07 | 82 |
presumptive neural plate | 5.68e-07 | 82 |
lateral plate mesoderm | 7.31e-07 | 203 |