FFCP PHASE1:Hg19::chr6:148593408..148593420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23328 | |EntrezGene=23328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19182 | |HGNC=19182 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TGN6 | |UniProt=Q5TGN6 | ||
|association_with_transcript=-19bp_to_ENST00000367469_5end | |association_with_transcript=-19bp_to_ENST00000367469_5end | ||
|cluster_id=chr6:148593408..148593420,+ | |||
|description=CAGE_peak_10_at_SASH1_5end | |description=CAGE_peak_10_at_SASH1_5end | ||
|id=chr6:148593408..148593420,+ | |id=chr6:148593408..148593420,+ | ||
|ontology_enrichment_celltype=CL:0000359;5.85e-22;32!CL:0002494;6.90e-21;16!CL:0000192;1.30e-14;43!CL:0000057;2.77e-14;73!CL:0000187;4.98e-12;55!CL:0002548;1.30e-11;6!CL:0002620;7.03e-11;23!CL:0000393;2.83e-10;61!CL:0000211;2.83e-10;61!CL:0002539;2.63e-09;10!CL:1000306;7.08e-09;4!CL:0002547;7.08e-09;4!CL:0002334;3.32e-08;12!CL:0002573;3.67e-07;2 | |ontology_enrichment_celltype=CL:0000055!3.27e-39!180;CL:0000057!7.39e-30!75;CL:0000187!1.36e-26!54;CL:0000680!2.51e-26!57;CL:0000056!2.51e-26!57;CL:0000355!2.51e-26!57;CL:0000183!8.85e-24!59;CL:0000393!5.06e-22!60;CL:0000211!5.06e-22!60;CL:0000192!6.97e-21!42;CL:0000514!6.97e-21!42;CL:0000359!2.60e-19!32;CL:0002494!3.54e-14!16;CL:0000222!1.86e-13!119;CL:0002620!1.62e-11!23;CL:0000048!2.95e-09!430;CL:0000723!1.39e-08!436;CL:0000034!9.82e-08!444;CL:0002539!1.59e-07!10;CL:0002334!1.90e-07!12;CL:0002548!9.66e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;5.85e-22;32!CL:0002494;6.90e-21;16!CL:0000192;1.30e-14;43!CL:0000057;2.77e-14;73!CL:0000187;4.98e-12;55!CL:0002548;1.30e-11;6!CL:0002620;7.03e-11;23!CL:0000393;2.83e-10;61!CL:0000211;2.83e-10;61!CL:0002539;2.63e-09;10!CL:1000306;7.08e-09;4!CL:0002547;7.08e-09;4!CL:0002334;3.32e-08;12!CL:0002573;3.67e-07;2 | ||
|ontology_enrichment_disease=DOID:17;3.03e-09;5!DOID:450;3.03e-09;5!DOID:66;3.03e-09;5!DOID:423;3.03e-09;5!DOID:0080000;3.03e-09;5!DOID:11722;3.03e-09;5 | |ontology_enrichment_celltype_v019_2=CL:0000057,6.49e-34,76;CL:0000187,2.59e-23,55;CL:0000359,3.46e-23,32;CL:0000680,1.24e-21,58;CL:0000056,1.24e-21,58;CL:0000355,1.24e-21,58;CL:0002494,4.16e-21,16;CL:0000393,4.02e-20,61;CL:0000211,4.02e-20,61;CL:0000192,1.21e-18,43;CL:0000514,1.21e-18,43;CL:0000048,1.84e-14,427;CL:0000723,6.01e-14,433;CL:0000034,2.76e-13,441;CL:0000222,2.54e-12,121;CL:0002548,6.81e-12,6;CL:0002620,3.58e-11,23;CL:0002539,3.41e-09,10;CL:1000306,4.74e-09,4;CL:0002547,4.74e-09,4;CL:0002334,5.42e-08,12;CL:0002573,3.46e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000948;2.24e-21;22!UBERON:0001637;1.15e-19;42!UBERON:0003509;1.15e-19;42!UBERON:0004572;1.15e-19;42!UBERON:0007100;3.28e-18;25!UBERON:0004573;7.59e-18;33!UBERON:0004571;7.59e-18;33!UBERON:0007500;1.12e-13;56!UBERON:0001981;1.12e-13;56!UBERON:0004537;1.12e-13;56!UBERON:0000947;2.71e-13;21!UBERON:0010191;2.71e-13;21!UBERON:0004535;2.52e-09;109!UBERON:0004237;2.63e-09;10!UBERON:0004695;2.63e-09;10!UBERON:0002111;2.63e-09;10!UBERON:0004178;2.63e-09;10!UBERON:0004797;7.08e-09;4!UBERON:0000415;7.08e-09;4!UBERON:0007240;7.08e-09;4!UBERON:0005742;7.08e-09;4!UBERON:0005734;7.08e-09;4!UBERON:0004664;7.08e-09;4!UBERON:0004663;7.08e-09;4!UBERON:0002049;1.38e-08;75!UBERON:0007798;1.38e-08;75!UBERON:0000055;2.40e-08;65!UBERON:0001009;2.45e-07;112!UBERON:0001135;2.56e-07;15!UBERON:0002385;7.20e-07;31!UBERON:0001015;7.20e-07;31!UBERON:0000383;7.20e-07;31 | |ontology_enrichment_development_v019=CL:0000514;1.30e-14;43!CL:0000355;1.77e-10;58 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.03e-09;5!DOID:450;3.03e-09;5!DOID:66;3.03e-09;5!DOID:423;3.03e-09;5!DOID:0080000;3.03e-09;5!DOID:11722;3.03e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.08e-09,5;DOID:450,1.08e-09,5;DOID:66,1.08e-09,5;DOID:423,1.08e-09,5;DOID:0080000,1.08e-09,5;DOID:11722,1.08e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!8.08e-30!84;UBERON:0000914!1.31e-26!83;UBERON:0002329!1.31e-26!83;UBERON:0003077!1.31e-26!83;UBERON:0003059!1.31e-26!83;UBERON:0007282!1.31e-26!83;UBERON:0009618!1.31e-26!83;UBERON:0007285!1.31e-26!83;UBERON:0001134!6.20e-26!61;UBERON:0002036!6.20e-26!61;UBERON:0003082!6.20e-26!61;UBERON:0004290!1.07e-25!70;UBERON:0002385!1.77e-25!63;UBERON:0001015!1.77e-25!63;UBERON:0000383!1.77e-25!63;UBERON:0001009!8.66e-23!113;UBERON:0004535!1.45e-22!110;UBERON:0001981!1.60e-22!60;UBERON:0007500!1.60e-22!60;UBERON:0004537!1.60e-22!60;UBERON:0006965!1.60e-22!60;UBERON:0001637!5.10e-21!42;UBERON:0003509!5.10e-21!42;UBERON:0004572!5.10e-21!42;UBERON:0002049!1.36e-20!79;UBERON:0007798!1.36e-20!79;UBERON:0000486!1.52e-20!82;UBERON:0000055!1.64e-19!69;UBERON:0003914!1.52e-18!118;UBERON:0000948!1.27e-17!24;UBERON:0005498!1.27e-17!24;UBERON:0004140!1.27e-17!24;UBERON:0009881!1.27e-17!24;UBERON:0004141!1.27e-17!24;UBERON:0003084!1.27e-17!24;UBERON:0007005!1.27e-17!24;UBERON:0004139!1.27e-17!24;UBERON:0004291!1.27e-17!24;UBERON:0004573!2.38e-17!33;UBERON:0004571!2.38e-17!33;UBERON:0007100!4.67e-17!27;UBERON:0000475!5.94e-15!365;UBERON:0005256!8.23e-15!143;UBERON:0000119!6.52e-14!312;UBERON:0000025!9.69e-14!194;UBERON:0000483!1.99e-13!309;UBERON:0000477!2.67e-13!286;UBERON:0000490!4.47e-13!138;UBERON:0004111!6.00e-13!241;UBERON:0000947!1.12e-10!21;UBERON:0010191!1.12e-10!21;UBERON:0000481!1.46e-09!347;UBERON:0000468!7.31e-09!659;UBERON:0001135!2.54e-08!15;UBERON:0002100!2.90e-08!216;UBERON:0002199!5.10e-08!45;UBERON:0002416!5.10e-08!45;UBERON:0003102!5.93e-08!95;UBERON:0004237!1.59e-07!10;UBERON:0004695!1.59e-07!10;UBERON:0002111!1.59e-07!10;UBERON:0004178!1.59e-07!10;UBERON:0003104!4.76e-07!238;UBERON:0009142!4.76e-07!238;UBERON:0000467!5.99e-07!625;UBERON:0002097!6.92e-07!40;UBERON:0000480!7.43e-07!626 | |||
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| ||
|short_description=p10@SASH1 | |short_description=p10@SASH1 | ||
}} | }} |
Latest revision as of 00:37, 16 September 2015
Short description: | p10@SASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000367469_5end |
EntrezGene: | SASH1 |
HGNC: | 19182 |
UniProt: | Q5TGN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.49e-34 | 76 |
muscle cell | 2.59e-23 | 55 |
vascular associated smooth muscle cell | 3.46e-23 | 32 |
muscle precursor cell | 1.24e-21 | 58 |
myoblast | 1.24e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-21 | 58 |
cardiocyte | 4.16e-21 | 16 |
electrically responsive cell | 4.02e-20 | 61 |
electrically active cell | 4.02e-20 | 61 |
smooth muscle cell | 1.21e-18 | 43 |
smooth muscle myoblast | 1.21e-18 | 43 |
multi fate stem cell | 1.84e-14 | 427 |
somatic stem cell | 6.01e-14 | 433 |
stem cell | 2.76e-13 | 441 |
mesodermal cell | 2.54e-12 | 121 |
cardiac fibroblast | 6.81e-12 | 6 |
skin fibroblast | 3.58e-11 | 23 |
aortic smooth muscle cell | 3.41e-09 | 10 |
fibroblast of tunica adventitia of artery | 4.74e-09 | 4 |
fibroblast of the aortic adventitia | 4.74e-09 | 4 |
preadipocyte | 5.42e-08 | 12 |
Schwann cell | 3.46e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.08e-09 | 5 |
myotonic disease | 1.08e-09 | 5 |
muscle tissue disease | 1.08e-09 | 5 |
myopathy | 1.08e-09 | 5 |
muscular disease | 1.08e-09 | 5 |
myotonic dystrophy | 1.08e-09 | 5 |