FFCP PHASE1:Hg19::chr6:151646800..151646817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9590 | |EntrezGene=9590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=370 | |HGNC=370 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000354675_5end | |association_with_transcript=-5bp_to_ENST00000354675_5end | ||
|cluster_id=chr6:151646800..151646817,+ | |||
|description=CAGE_peak_2_at_AKAP12_5end | |description=CAGE_peak_2_at_AKAP12_5end | ||
|id=chr6:151646800..151646817,+ | |id=chr6:151646800..151646817,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.84e-24!119;CL:0000055!7.56e-16!180;CL:0002139!1.28e-14!24;CL:0000680!7.90e-14!57;CL:0000056!7.90e-14!57;CL:0000355!7.90e-14!57;CL:0000183!3.56e-13!59;CL:0002078!3.75e-13!44;CL:0000187!5.70e-13!54;CL:0000220!6.61e-12!246;CL:0000115!8.21e-12!35;CL:0000071!8.59e-12!18;CL:0002546!8.59e-12!18;CL:0002321!2.80e-11!248;CL:0000213!4.80e-11!57;CL:0000215!4.80e-11!57;CL:0000359!7.07e-11!32;CL:0000393!7.87e-11!60;CL:0000211!7.87e-11!60;CL:0000192!4.78e-10!42;CL:0000514!4.78e-10!42;CL:1000413!7.76e-07!9 | |ontology_enrichment_celltype=CL:0000222!1.84e-24!119;CL:0000055!7.56e-16!180;CL:0002139!1.28e-14!24;CL:0000680!7.90e-14!57;CL:0000056!7.90e-14!57;CL:0000355!7.90e-14!57;CL:0000183!3.56e-13!59;CL:0002078!3.75e-13!44;CL:0000187!5.70e-13!54;CL:0000220!6.61e-12!246;CL:0000115!8.21e-12!35;CL:0000071!8.59e-12!18;CL:0002546!8.59e-12!18;CL:0002321!2.80e-11!248;CL:0000213!4.80e-11!57;CL:0000215!4.80e-11!57;CL:0000359!7.07e-11!32;CL:0000393!7.87e-11!60;CL:0000211!7.87e-11!60;CL:0000192!4.78e-10!42;CL:0000514!4.78e-10!42;CL:1000413!7.76e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.34e-15;24!CL:0000071;4.32e-12;18!CL:0000359;1.77e-10;32!CL:0000115;1.86e-10;36!CL:0002078;9.69e-10;45!CL:0000187;6.37e-08;55!CL:0000192;6.69e-08;43!CL:0000213;4.16e-07;58!CL:0000215;4.16e-07;58!CL:1000413;5.45e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.54e-25,121;CL:0002139,5.40e-15,24;CL:0000680,4.01e-14,58;CL:0000056,4.01e-14,58;CL:0000355,4.01e-14,58;CL:0002078,7.61e-14,45;CL:0000187,3.05e-13,55;CL:0000115,1.82e-12,36;CL:0000071,4.36e-12,18;CL:0002546,4.36e-12,18;CL:0000213,1.94e-11,58;CL:0000215,1.94e-11,58;CL:0000393,2.78e-11,61;CL:0000211,2.78e-11,61;CL:0002321,4.99e-11,250;CL:0000359,6.64e-11,32;CL:0000192,3.70e-10,43;CL:0000514,3.70e-10,43;CL:0000057,4.71e-07,76;CL:1000413,5.45e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.32e-12;18!CL:0000514;6.69e-08;43!CL:0000355;2.14e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.47e-30!312;UBERON:0002049!2.34e-29!79;UBERON:0007798!2.34e-29!79;UBERON:0000483!5.26e-29!309;UBERON:0003914!1.30e-27!118;UBERON:0000055!5.19e-26!69;UBERON:0000477!2.57e-25!286;UBERON:0001981!3.88e-24!60;UBERON:0007500!3.88e-24!60;UBERON:0004537!3.88e-24!60;UBERON:0006965!3.88e-24!60;UBERON:0000025!2.17e-23!194;UBERON:0004872!4.63e-23!84;UBERON:0000490!1.06e-22!138;UBERON:0004111!1.27e-22!241;UBERON:0001009!2.16e-20!113;UBERON:0004535!2.55e-20!110;UBERON:0000468!1.36e-19!659;UBERON:0000467!1.79e-18!625;UBERON:0001637!1.87e-18!42;UBERON:0003509!1.87e-18!42;UBERON:0004572!1.87e-18!42;UBERON:0000480!3.82e-18!626;UBERON:0000481!8.75e-18!347;UBERON:0005256!5.25e-17!143;UBERON:0000486!5.04e-16!82;UBERON:0000475!1.97e-15!365;UBERON:0004573!3.82e-15!33;UBERON:0004571!3.82e-15!33;UBERON:0001134!4.01e-15!61;UBERON:0002036!4.01e-15!61;UBERON:0003082!4.01e-15!61;UBERON:0002385!5.13e-15!63;UBERON:0001015!5.13e-15!63;UBERON:0000383!5.13e-15!63;UBERON:0002100!8.71e-15!216;UBERON:0004290!1.48e-14!70;UBERON:0000914!9.94e-14!83;UBERON:0002329!9.94e-14!83;UBERON:0003077!9.94e-14!83;UBERON:0003059!9.94e-14!83;UBERON:0007282!9.94e-14!83;UBERON:0009618!9.94e-14!83;UBERON:0007285!9.94e-14!83;UBERON:0002050!1.60e-13!605;UBERON:0005423!1.60e-13!605;UBERON:0000923!2.76e-13!604;UBERON:0005291!2.76e-13!604;UBERON:0006598!2.76e-13!604;UBERON:0002532!2.76e-13!604;UBERON:0000922!3.92e-13!612;UBERON:0006914!7.07e-13!25;UBERON:0003104!7.80e-12!238;UBERON:0009142!7.80e-12!238;UBERON:0001986!8.59e-12!18;UBERON:0004638!8.59e-12!18;UBERON:0004852!8.59e-12!18;UBERON:0000487!1.06e-11!22;UBERON:0000947!1.48e-09!21;UBERON:0010191!1.48e-09!21;UBERON:0003103!1.72e-08!69;UBERON:0000926!4.60e-07!448;UBERON:0004120!4.60e-07!448;UBERON:0006603!4.60e-07!448;UBERON:0003915!7.76e-07!9;UBERON:0004700!7.76e-07!9;UBERON:0001917!7.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.22e-14;33!UBERON:0004571;2.22e-14;33!UBERON:0001637;4.94e-14;42!UBERON:0003509;4.94e-14;42!UBERON:0004572;4.94e-14;42!UBERON:0006914;3.77e-13;25!UBERON:0000055;1.54e-12;65!UBERON:0007500;1.85e-12;56!UBERON:0001981;1.85e-12;56!UBERON:0004537;1.85e-12;56!UBERON:0002049;1.91e-12;75!UBERON:0007798;1.91e-12;75!UBERON:0004638;4.32e-12;18!UBERON:0001986;4.32e-12;18!UBERON:0004852;4.32e-12;18!UBERON:0000487;5.92e-12;22!UBERON:0003914;3.05e-11;74!UBERON:0000947;9.20e-10;21!UBERON:0010191;9.20e-10;21!UBERON:0002385;1.51e-09;31!UBERON:0001015;1.51e-09;31!UBERON:0000383;1.51e-09;31!UBERON:0000490;8.48e-08;33!UBERON:0000025;2.10e-07;93!UBERON:0004535;5.27e-07;109!UBERON:0003915;5.45e-07;9!UBERON:0004700;5.45e-07;9!UBERON:0001917;5.45e-07;9 | |||
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| ||
|short_description=p2@AKAP12 | |short_description=p2@AKAP12 | ||
}} | }} |
Latest revision as of 04:45, 16 September 2015
Short description: | p2@AKAP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AKAP12_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000354675_5end |
EntrezGene: | AKAP12 |
HGNC: | 370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.54e-25 | 121 |
endothelial cell of vascular tree | 5.40e-15 | 24 |
muscle precursor cell | 4.01e-14 | 58 |
myoblast | 4.01e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.01e-14 | 58 |
meso-epithelial cell | 7.61e-14 | 45 |
muscle cell | 3.05e-13 | 55 |
endothelial cell | 1.82e-12 | 36 |
blood vessel endothelial cell | 4.36e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.36e-12 | 18 |
lining cell | 1.94e-11 | 58 |
barrier cell | 1.94e-11 | 58 |
electrically responsive cell | 2.78e-11 | 61 |
electrically active cell | 2.78e-11 | 61 |
embryonic cell | 4.99e-11 | 250 |
vascular associated smooth muscle cell | 6.64e-11 | 32 |
smooth muscle cell | 3.70e-10 | 43 |
smooth muscle myoblast | 3.70e-10 | 43 |
fibroblast | 4.71e-07 | 76 |
endothelial cell of artery | 5.45e-07 | 9 |