FFCP PHASE1:Hg19::chr19:14606956..14606978,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:14606956..14606978,-
|short_description=p2@GIPC1
|description=CAGE_peak_2_at_GIPC1_5end
|association_with_transcript=-12bp_to_ENST00000345425,ENST00000393...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10755 | |EntrezGene=10755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1226 | |HGNC=1226 | ||
|TSSclassifier=strong | |||
|UniProt=O14908,A8K4I3 | |UniProt=O14908,A8K4I3 | ||
|association_with_transcript=-12bp_to_ENST00000345425,ENST00000393028,ENST00000393029,ENST00000393033,NM_005716,NM_202467,NM_202468,NM_202469,NM_202470,NM_202494,uc002myt.2,uc002myu.2,uc002myv.2,uc002myw.2,uc002myx.2,uc002myy.2_5end | |||
|cluster_id=chr19:14606956..14606978,- | |||
|description=CAGE_peak_2_at_GIPC1_5end | |||
|id=chr19:14606956..14606978,- | |||
|ontology_enrichment_celltype=CL:0000222!1.82e-23!119;CL:0000055!8.36e-20!180;CL:0000220!9.73e-16!246;CL:0002321!5.03e-15!248;CL:0000183!5.05e-14!59;CL:0002078!2.50e-12!44;CL:0000680!1.95e-11!57;CL:0000056!1.95e-11!57;CL:0000355!1.95e-11!57;CL:0000187!2.08e-11!54;CL:0000213!6.36e-11!57;CL:0000215!6.36e-11!57;CL:0000192!1.10e-10!42;CL:0000514!1.10e-10!42;CL:0000115!1.86e-10!35;CL:0000393!4.88e-10!60;CL:0000211!4.88e-10!60;CL:0000359!1.06e-08!32;CL:0000057!3.31e-08!75;CL:1000449!3.94e-08!16;CL:0002139!7.33e-08!24;CL:0002681!1.28e-07!13;CL:0002584!1.28e-07!13;CL:0000071!3.02e-07!18;CL:0002546!3.02e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.21e-09;36!CL:0002078;1.19e-08;45!CL:0000359;1.71e-08;32!CL:1000449;4.86e-08;15!CL:0000192;7.33e-08;43!CL:0002139;1.19e-07;24!CL:0002681;1.68e-07;12!CL:0002584;1.68e-07;12!CL:0000071;3.14e-07;18!CL:0000213;4.18e-07;58!CL:0000215;4.18e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.03e-24,121;CL:0002321,2.94e-15,250;CL:0002078,7.89e-13,45;CL:0000680,1.13e-11,58;CL:0000056,1.13e-11,58;CL:0000355,1.13e-11,58;CL:0000187,1.21e-11,55;CL:0000213,2.23e-11,58;CL:0000215,2.23e-11,58;CL:0000115,5.92e-11,36;CL:0000192,6.46e-11,43;CL:0000514,6.46e-11,43;CL:0000393,2.89e-10,61;CL:0000211,2.89e-10,61;CL:0000359,1.02e-08,32;CL:0000057,1.46e-08,76;CL:1000449,5.48e-08,15;CL:0002139,7.09e-08,24;CL:0002681,1.71e-07,12;CL:0002584,1.71e-07,12;CL:0000071,2.93e-07,18;CL:0002546,2.93e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;7.33e-08;43!CL:0002546;3.14e-07;18!CL:0000222;4.39e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.29e-26!312;UBERON:0000483!2.51e-26!309;UBERON:0000475!4.53e-21!365;UBERON:0005256!1.67e-19!143;UBERON:0002049!3.32e-19!79;UBERON:0007798!3.32e-19!79;UBERON:0003914!2.59e-18!118;UBERON:0004872!1.30e-17!84;UBERON:0000481!4.90e-17!347;UBERON:0004111!6.38e-17!241;UBERON:0000025!1.66e-16!194;UBERON:0000055!2.47e-16!69;UBERON:0000477!3.16e-16!286;UBERON:0001981!2.60e-15!60;UBERON:0007500!2.60e-15!60;UBERON:0004537!2.60e-15!60;UBERON:0006965!2.60e-15!60;UBERON:0004290!4.99e-15!70;UBERON:0000914!9.94e-15!83;UBERON:0002329!9.94e-15!83;UBERON:0003077!9.94e-15!83;UBERON:0003059!9.94e-15!83;UBERON:0007282!9.94e-15!83;UBERON:0009618!9.94e-15!83;UBERON:0007285!9.94e-15!83;UBERON:0002100!1.89e-14!216;UBERON:0000486!4.13e-14!82;UBERON:0000490!7.34e-13!138;UBERON:0001134!1.88e-12!61;UBERON:0002036!1.88e-12!61;UBERON:0003082!1.88e-12!61;UBERON:0002385!1.95e-12!63;UBERON:0001015!1.95e-12!63;UBERON:0000383!1.95e-12!63;UBERON:0004535!3.34e-12!110;UBERON:0001009!5.57e-12!113;UBERON:0001637!1.37e-11!42;UBERON:0003509!1.37e-11!42;UBERON:0004572!1.37e-11!42;UBERON:0000468!3.76e-11!659;UBERON:0003104!6.24e-11!238;UBERON:0009142!6.24e-11!238;UBERON:0000467!2.35e-10!625;UBERON:0000480!4.08e-10!626;UBERON:0000353!6.41e-09!17;UBERON:0004876!2.04e-08!20;UBERON:0001851!2.82e-08!16;UBERON:0006555!3.29e-08!17;UBERON:0005103!3.29e-08!17;UBERON:0000083!3.29e-08!17;UBERON:0009201!3.29e-08!17;UBERON:0004819!3.29e-08!17;UBERON:0006553!3.29e-08!17;UBERON:0003074!3.29e-08!17;UBERON:0003060!3.29e-08!17;UBERON:0000080!3.59e-08!18;UBERON:0002120!3.59e-08!18;UBERON:0004875!3.59e-08!18;UBERON:0005721!3.59e-08!18;UBERON:0005754!3.59e-08!18;UBERON:0007297!3.59e-08!18;UBERON:0004211!3.94e-08!16;UBERON:0001285!3.94e-08!16;UBERON:0007684!3.94e-08!16;UBERON:0003220!3.94e-08!16;UBERON:0004208!3.94e-08!16;UBERON:0003064!4.03e-08!37;UBERON:0004573!4.82e-08!33;UBERON:0004571!4.82e-08!33;UBERON:0003103!5.13e-08!69;UBERON:0002050!1.00e-07!605;UBERON:0005423!1.00e-07!605;UBERON:0001225!1.28e-07!13;UBERON:0008987!1.28e-07!13;UBERON:0000923!1.34e-07!604;UBERON:0005291!1.34e-07!604;UBERON:0006598!1.34e-07!604;UBERON:0002532!1.34e-07!604;UBERON:0001986!3.02e-07!18;UBERON:0004638!3.02e-07!18;UBERON:0004852!3.02e-07!18;UBERON:0000064!3.30e-07!219;UBERON:0000922!3.90e-07!612;UBERON:0000487!8.79e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.06e-09;74!UBERON:0007500;6.61e-09;56!UBERON:0001981;6.61e-09;56!UBERON:0004537;6.61e-09;56!UBERON:0000353;1.86e-08;15!UBERON:0001637;1.96e-08;42!UBERON:0003509;1.96e-08;42!UBERON:0004572;1.96e-08;42!UBERON:0001851;4.76e-08;15!UBERON:0006555;4.86e-08;15!UBERON:0004819;4.86e-08;15!UBERON:0001285;4.86e-08;15!UBERON:0007684;4.86e-08;15!UBERON:0002049;8.69e-08;75!UBERON:0007798;8.69e-08;75!UBERON:0001225;1.68e-07;12!UBERON:0008987;1.68e-07;12!UBERON:0004573;3.14e-07;33!UBERON:0004571;3.14e-07;33!UBERON:0004638;3.14e-07;18!UBERON:0001986;3.14e-07;18!UBERON:0004852;3.14e-07;18!UBERON:0000055;4.42e-07;65!UBERON:0000487;9.78e-07;22 | |||
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| ||
|short_description=p2@GIPC1 | |||
}} | }} |
Latest revision as of 05:05, 16 September 2015
Short description: | p2@GIPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GIPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000345425, ENST00000393028, ENST00000393029, ENST00000393033, NM_005716, NM_202467, NM_202468, NM_202469, NM_202470, NM_202494, uc002myt.2, uc002myu.2, uc002myv.2, uc002myw.2, uc002myx.2, uc002myy.2_5end |
EntrezGene: | GIPC1 |
HGNC: | 1226 |
UniProt: | O14908A8K4I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.03e-24 | 121 |
embryonic cell | 2.94e-15 | 250 |
meso-epithelial cell | 7.89e-13 | 45 |
muscle precursor cell | 1.13e-11 | 58 |
myoblast | 1.13e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-11 | 58 |
muscle cell | 1.21e-11 | 55 |
lining cell | 2.23e-11 | 58 |
barrier cell | 2.23e-11 | 58 |
endothelial cell | 5.92e-11 | 36 |
smooth muscle cell | 6.46e-11 | 43 |
smooth muscle myoblast | 6.46e-11 | 43 |
electrically responsive cell | 2.89e-10 | 61 |
electrically active cell | 2.89e-10 | 61 |
vascular associated smooth muscle cell | 1.02e-08 | 32 |
fibroblast | 1.46e-08 | 76 |
epithelial cell of nephron | 5.48e-08 | 15 |
endothelial cell of vascular tree | 7.09e-08 | 24 |
kidney cortical cell | 1.71e-07 | 12 |
renal cortical epithelial cell | 1.71e-07 | 12 |
blood vessel endothelial cell | 2.93e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.93e-07 | 18 |