FFCP PHASE1:Hg19::chr12:109125264..109125269,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23603 | |EntrezGene=23603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2254 | |HGNC=2254 | ||
|TSSclassifier=strong | |||
|UniProt=F8VV53 | |UniProt=F8VV53 | ||
|association_with_transcript=24bp_to_ENST00000549384,ENST00000551059,ENST00000552871_5end | |association_with_transcript=24bp_to_ENST00000549384,ENST00000551059,ENST00000552871_5end | ||
|cluster_id=chr12:109125264..109125269,- | |||
|description=CAGE_peak_2_at_CORO1C_5end | |description=CAGE_peak_2_at_CORO1C_5end | ||
|id=chr12:109125264..109125269,- | |id=chr12:109125264..109125269,- | ||
|ontology_enrichment_celltype=CL:0000055!2.80e-32!180;CL:0002371!5.23e-29!591;CL:0000144!1.93e-28!625;CL:0000048!4.36e-22!430;CL:0000548!6.35e-22!679;CL:0000004!6.35e-22!679;CL:0000255!6.35e-22!679;CL:0000723!1.51e-21!436;CL:0000012!3.27e-21!682;CL:0000034!3.69e-19!444;CL:0000222!3.99e-19!119;CL:0000680!2.25e-18!57;CL:0000056!2.25e-18!57;CL:0000355!2.25e-18!57;CL:0000057!4.45e-18!75;CL:0000187!6.60e-17!54;CL:0000192!1.72e-16!42;CL:0000514!1.72e-16!42;CL:0000183!5.30e-16!59;CL:0000359!9.51e-15!32;CL:0000393!1.39e-14!60;CL:0000211!1.39e-14!60;CL:0000003!5.77e-13!722;CL:0000220!3.40e-11!246;CL:0002620!5.95e-11!23;CL:0002321!1.44e-10!248;CL:0002320!1.04e-08!365;CL:0000134!2.28e-08!358;CL:0000219!2.73e-07!390;CL:0000063!7.14e-07!578;CL:0002009!7.87e-07!65 | |ontology_enrichment_celltype=CL:0000055!2.80e-32!180;CL:0002371!5.23e-29!591;CL:0000144!1.93e-28!625;CL:0000048!4.36e-22!430;CL:0000548!6.35e-22!679;CL:0000004!6.35e-22!679;CL:0000255!6.35e-22!679;CL:0000723!1.51e-21!436;CL:0000012!3.27e-21!682;CL:0000034!3.69e-19!444;CL:0000222!3.99e-19!119;CL:0000680!2.25e-18!57;CL:0000056!2.25e-18!57;CL:0000355!2.25e-18!57;CL:0000057!4.45e-18!75;CL:0000187!6.60e-17!54;CL:0000192!1.72e-16!42;CL:0000514!1.72e-16!42;CL:0000183!5.30e-16!59;CL:0000359!9.51e-15!32;CL:0000393!1.39e-14!60;CL:0000211!1.39e-14!60;CL:0000003!5.77e-13!722;CL:0000220!3.40e-11!246;CL:0002620!5.95e-11!23;CL:0002321!1.44e-10!248;CL:0002320!1.04e-08!365;CL:0000134!2.28e-08!358;CL:0000219!2.73e-07!390;CL:0000063!7.14e-07!578;CL:0002009!7.87e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.65e-14;32!CL:0000192;6.50e-12;43!CL:0002620;3.20e-11;23!CL:0000187;1.22e-09;55!CL:0000057;4.04e-08;73!CL:0000393;1.48e-07;61!CL:0000211;1.48e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;4.65e-14;32!CL:0000192;6.50e-12;43!CL:0002620;3.20e-11;23!CL:0000187;1.22e-09;55!CL:0000057;4.04e-08;73!CL:0000393;1.48e-07;61!CL:0000211;1.48e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.32e-24,427;CL:0000723,3.70e-23,433;CL:0000034,1.50e-20,441;CL:0000222,2.76e-19,121;CL:0000057,6.76e-19,76;CL:0000680,3.32e-18,58;CL:0000056,3.32e-18,58;CL:0000355,3.32e-18,58;CL:0000187,9.75e-17,55;CL:0000192,2.99e-16,43;CL:0000514,2.99e-16,43;CL:0000359,7.86e-15,32;CL:0000393,2.28e-14,61;CL:0000211,2.28e-14,61;CL:0002620,5.19e-11,23;CL:0002321,1.62e-10,250;CL:0002320,7.64e-10,361;CL:0000134,1.76e-09,354;CL:0000219,3.27e-08,386;CL:0002009,8.74e-08,61;CL:0002194,4.90e-07,59;CL:0000576,4.90e-07,59;CL:0000040,4.90e-07,59;CL:0000559,4.90e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000514;6.50e-12;43!CL:0000355;8.94e-10;58 | |ontology_enrichment_development_v019=CL:0000514;6.50e-12;43!CL:0000355;8.94e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.49e-25!167;UBERON:0000914!1.54e-22!83;UBERON:0002329!1.54e-22!83;UBERON:0003077!1.54e-22!83;UBERON:0003059!1.54e-22!83;UBERON:0007282!1.54e-22!83;UBERON:0009618!1.54e-22!83;UBERON:0007285!1.54e-22!83;UBERON:0004290!1.64e-19!70;UBERON:0000486!2.29e-18!82;UBERON:0003081!1.97e-16!216;UBERON:0001134!2.46e-16!61;UBERON:0002036!2.46e-16!61;UBERON:0003082!2.46e-16!61;UBERON:0002385!2.56e-16!63;UBERON:0001015!2.56e-16!63;UBERON:0000383!2.56e-16!63;UBERON:0001637!2.73e-15!42;UBERON:0003509!2.73e-15!42;UBERON:0004572!2.73e-15!42;UBERON:0002049!2.04e-14!79;UBERON:0007798!2.04e-14!79;UBERON:0005256!3.87e-14!143;UBERON:0000926!7.58e-14!448;UBERON:0004120!7.58e-14!448;UBERON:0006603!7.58e-14!448;UBERON:0000055!1.15e-13!69;UBERON:0001981!1.48e-13!60;UBERON:0007500!1.48e-13!60;UBERON:0004537!1.48e-13!60;UBERON:0006965!1.48e-13!60;UBERON:0004535!4.32e-13!110;UBERON:0004573!6.22e-13!33;UBERON:0004571!6.22e-13!33;UBERON:0004872!1.26e-12!84;UBERON:0001009!3.37e-12!113;UBERON:0000467!1.11e-11!625;UBERON:0000480!1.68e-11!626;UBERON:0000468!1.81e-11!659;UBERON:0002199!9.26e-10!45;UBERON:0002416!9.26e-10!45;UBERON:0003102!1.44e-09!95;UBERON:0002097!2.17e-09!40;UBERON:0004765!3.45e-09!101;UBERON:0001434!3.45e-09!101;UBERON:0002384!9.99e-09!375;UBERON:0000490!1.10e-08!138;UBERON:0003914!3.08e-08!118;UBERON:0000947!3.70e-08!21;UBERON:0010191!3.70e-08!21;UBERON:0002371!3.01e-07!80;UBERON:0001474!7.68e-07!86;UBERON:0002100!8.68e-07!216 | |ontology_enrichment_uberon=UBERON:0002204!1.49e-25!167;UBERON:0000914!1.54e-22!83;UBERON:0002329!1.54e-22!83;UBERON:0003077!1.54e-22!83;UBERON:0003059!1.54e-22!83;UBERON:0007282!1.54e-22!83;UBERON:0009618!1.54e-22!83;UBERON:0007285!1.54e-22!83;UBERON:0004290!1.64e-19!70;UBERON:0000486!2.29e-18!82;UBERON:0003081!1.97e-16!216;UBERON:0001134!2.46e-16!61;UBERON:0002036!2.46e-16!61;UBERON:0003082!2.46e-16!61;UBERON:0002385!2.56e-16!63;UBERON:0001015!2.56e-16!63;UBERON:0000383!2.56e-16!63;UBERON:0001637!2.73e-15!42;UBERON:0003509!2.73e-15!42;UBERON:0004572!2.73e-15!42;UBERON:0002049!2.04e-14!79;UBERON:0007798!2.04e-14!79;UBERON:0005256!3.87e-14!143;UBERON:0000926!7.58e-14!448;UBERON:0004120!7.58e-14!448;UBERON:0006603!7.58e-14!448;UBERON:0000055!1.15e-13!69;UBERON:0001981!1.48e-13!60;UBERON:0007500!1.48e-13!60;UBERON:0004537!1.48e-13!60;UBERON:0006965!1.48e-13!60;UBERON:0004535!4.32e-13!110;UBERON:0004573!6.22e-13!33;UBERON:0004571!6.22e-13!33;UBERON:0004872!1.26e-12!84;UBERON:0001009!3.37e-12!113;UBERON:0000467!1.11e-11!625;UBERON:0000480!1.68e-11!626;UBERON:0000468!1.81e-11!659;UBERON:0002199!9.26e-10!45;UBERON:0002416!9.26e-10!45;UBERON:0003102!1.44e-09!95;UBERON:0002097!2.17e-09!40;UBERON:0004765!3.45e-09!101;UBERON:0001434!3.45e-09!101;UBERON:0002384!9.99e-09!375;UBERON:0000490!1.10e-08!138;UBERON:0003914!3.08e-08!118;UBERON:0000947!3.70e-08!21;UBERON:0010191!3.70e-08!21;UBERON:0002371!3.01e-07!80;UBERON:0001474!7.68e-07!86;UBERON:0002100!8.68e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.37e-11;33!UBERON:0004571;1.37e-11;33!UBERON:0001637;5.02e-11;42!UBERON:0003509;5.02e-11;42!UBERON:0004572;5.02e-11;42!UBERON:0007500;5.24e-09;56!UBERON:0001981;5.24e-09;56!UBERON:0004537;5.24e-09;56!UBERON:0000947;3.77e-08;21!UBERON:0010191;3.77e-08;21!UBERON:0002097;1.82e-07;41!UBERON:0002049;2.47e-07;75!UBERON:0007798;2.47e-07;75!UBERON:0000055;2.54e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.37e-11;33!UBERON:0004571;1.37e-11;33!UBERON:0001637;5.02e-11;42!UBERON:0003509;5.02e-11;42!UBERON:0004572;5.02e-11;42!UBERON:0007500;5.24e-09;56!UBERON:0001981;5.24e-09;56!UBERON:0004537;5.24e-09;56!UBERON:0000947;3.77e-08;21!UBERON:0010191;3.77e-08;21!UBERON:0002097;1.82e-07;41!UBERON:0002049;2.47e-07;75!UBERON:0007798;2.47e-07;75!UBERON:0000055;2.54e-07;65 | ||
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| ||
|short_description=p2@CORO1C | |short_description=p2@CORO1C | ||
}} | }} |
Latest revision as of 05:32, 16 September 2015
Short description: | p2@CORO1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CORO1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000549384, ENST00000551059, ENST00000552871_5end |
EntrezGene: | CORO1C |
HGNC: | 2254 |
UniProt: | F8VV53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.32e-24 | 427 |
somatic stem cell | 3.70e-23 | 433 |
stem cell | 1.50e-20 | 441 |
mesodermal cell | 2.76e-19 | 121 |
fibroblast | 6.76e-19 | 76 |
muscle precursor cell | 3.32e-18 | 58 |
myoblast | 3.32e-18 | 58 |
multi-potent skeletal muscle stem cell | 3.32e-18 | 58 |
muscle cell | 9.75e-17 | 55 |
smooth muscle cell | 2.99e-16 | 43 |
smooth muscle myoblast | 2.99e-16 | 43 |
vascular associated smooth muscle cell | 7.86e-15 | 32 |
electrically responsive cell | 2.28e-14 | 61 |
electrically active cell | 2.28e-14 | 61 |
skin fibroblast | 5.19e-11 | 23 |
embryonic cell | 1.62e-10 | 250 |
connective tissue cell | 7.64e-10 | 361 |
mesenchymal cell | 1.76e-09 | 354 |
motile cell | 3.27e-08 | 386 |
macrophage dendritic cell progenitor | 8.74e-08 | 61 |
monopoietic cell | 4.90e-07 | 59 |
monocyte | 4.90e-07 | 59 |
monoblast | 4.90e-07 | 59 |
promonocyte | 4.90e-07 | 59 |