FFCP PHASE1:Hg19::chr3:159481873..159481888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_uc010hvz.1_5end | |association_with_transcript=-41bp_to_uc010hvz.1_5end | ||
|cluster_id=chr3:159481873..159481888,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_SCHIP1_5end | |description=CAGE_peak_4_at_SCHIP1_5end | ||
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|ontology_enrichment_celltype=CL:0002139!4.94e-07!24;CL:0000066!7.65e-07!254;CL:0000076!9.72e-07!62 | |ontology_enrichment_celltype=CL:0002139!4.94e-07!24;CL:0000066!7.65e-07!254;CL:0000076!9.72e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.01e-08;24!CL:0000115;8.90e-07;36 | |ontology_enrichment_celltype_v019=CL:0002139;3.01e-08;24!CL:0000115;8.90e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002078,7.62e-09,45;CL:0002139,2.09e-08,24;CL:0000115,5.89e-08,36;CL:0000213,5.35e-07,58;CL:0000215,5.35e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;3.12e-20;34!UBERON:0002020;3.12e-20;34!UBERON:0001893;5.58e-20;34!UBERON:0002791;1.45e-19;32!UBERON:0001869;1.66e-19;32!UBERON:0000956;2.04e-16;25!UBERON:0000203;2.04e-16;25!UBERON:0002780;4.25e-16;41!UBERON:0001890;4.25e-16;41!UBERON:0002619;9.28e-15;22!UBERON:0000073;4.54e-14;53!UBERON:0002616;4.54e-14;53!UBERON:0001950;2.39e-13;20!UBERON:0000955;8.73e-09;68!UBERON:0000125;1.33e-08;9!UBERON:0002308;1.33e-08;9!UBERON:0001017;2.42e-08;75!UBERON:0002420;4.30e-08;9!UBERON:0007245;4.30e-08;9!UBERON:0010009;4.30e-08;9!UBERON:0010011;4.30e-08;9!UBERON:0000454;4.30e-08;9!UBERON:0001016;2.82e-07;83!UBERON:0002298;4.16e-07;6!UBERON:0009663;9.33e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0003528;3.12e-20;34!UBERON:0002020;3.12e-20;34!UBERON:0001893;5.58e-20;34!UBERON:0002791;1.45e-19;32!UBERON:0001869;1.66e-19;32!UBERON:0000956;2.04e-16;25!UBERON:0000203;2.04e-16;25!UBERON:0002780;4.25e-16;41!UBERON:0001890;4.25e-16;41!UBERON:0002619;9.28e-15;22!UBERON:0000073;4.54e-14;53!UBERON:0002616;4.54e-14;53!UBERON:0001950;2.39e-13;20!UBERON:0000955;8.73e-09;68!UBERON:0000125;1.33e-08;9!UBERON:0002308;1.33e-08;9!UBERON:0001017;2.42e-08;75!UBERON:0002420;4.30e-08;9!UBERON:0007245;4.30e-08;9!UBERON:0010009;4.30e-08;9!UBERON:0010011;4.30e-08;9!UBERON:0000454;4.30e-08;9!UBERON:0001016;2.82e-07;83!UBERON:0002298;4.16e-07;6!UBERON:0009663;9.33e-07;7 | ||
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| ||
|short_description=p4@SCHIP1 | |short_description=p4@SCHIP1 | ||
}} | }} |
Latest revision as of 09:29, 16 September 2015
Short description: | p4@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCHIP1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -41bp_to_uc010hvz.1_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 7.62e-09 | 45 |
endothelial cell of vascular tree | 2.09e-08 | 24 |
endothelial cell | 5.89e-08 | 36 |
lining cell | 5.35e-07 | 58 |
barrier cell | 5.35e-07 | 58 |