FFCP PHASE1:Hg19::chr3:159481873..159481888,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_uc010hvz.1_5end | |||
|cluster_id=chr3:159481873..159481888,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_SCHIP1_5end | |||
|id=chr3:159481873..159481888,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.94e-07!24;CL:0000066!7.65e-07!254;CL:0000076!9.72e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.01e-08;24!CL:0000115;8.90e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,7.62e-09,45;CL:0002139,2.09e-08,24;CL:0000115,5.89e-08,36;CL:0000213,5.35e-07,58;CL:0000215,5.35e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.63e-23!286;UBERON:0004111!7.40e-23!241;UBERON:0001049!2.10e-21!57;UBERON:0005068!2.10e-21!57;UBERON:0006241!2.10e-21!57;UBERON:0007135!2.10e-21!57;UBERON:0000025!2.46e-21!194;UBERON:0000467!7.35e-21!625;UBERON:0000480!1.50e-20!626;UBERON:0000119!7.86e-20!312;UBERON:0000483!2.46e-19!309;UBERON:0003075!3.23e-19!86;UBERON:0007284!3.23e-19!86;UBERON:0002616!6.31e-18!59;UBERON:0002020!1.70e-17!34;UBERON:0003528!1.70e-17!34;UBERON:0001893!1.86e-17!34;UBERON:0000468!1.89e-17!659;UBERON:0001017!1.91e-17!82;UBERON:0000064!3.50e-17!219;UBERON:0002791!7.69e-17!33;UBERON:0003080!1.01e-16!42;UBERON:0002346!1.34e-16!90;UBERON:0000481!1.55e-16!347;UBERON:0002780!1.55e-16!41;UBERON:0001890!1.55e-16!41;UBERON:0006240!1.55e-16!41;UBERON:0004121!2.67e-16!169;UBERON:0005743!3.40e-16!86;UBERON:0001869!4.50e-16!32;UBERON:0000955!5.49e-16!69;UBERON:0006238!5.49e-16!69;UBERON:0000062!1.66e-15!511;UBERON:0000033!3.61e-15!123;UBERON:0003056!4.99e-15!61;UBERON:0000073!8.08e-15!94;UBERON:0001016!8.08e-15!94;UBERON:0000924!1.12e-14!173;UBERON:0006601!1.12e-14!173;UBERON:0002050!3.02e-14!605;UBERON:0005423!3.02e-14!605;UBERON:0000923!6.35e-14!604;UBERON:0005291!6.35e-14!604;UBERON:0006598!6.35e-14!604;UBERON:0002532!6.35e-14!604;UBERON:0000475!9.95e-14!365;UBERON:0000922!1.51e-13!612;UBERON:0000153!3.28e-13!129;UBERON:0007811!3.28e-13!129;UBERON:0000956!4.13e-12!25;UBERON:0000203!4.13e-12!25;UBERON:0007023!4.97e-11!115;UBERON:0002619!5.67e-11!22;UBERON:0001950!6.09e-10!20;UBERON:0002308!5.40e-07!9;UBERON:0000125!5.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.12e-20;34!UBERON:0002020;3.12e-20;34!UBERON:0001893;5.58e-20;34!UBERON:0002791;1.45e-19;32!UBERON:0001869;1.66e-19;32!UBERON:0000956;2.04e-16;25!UBERON:0000203;2.04e-16;25!UBERON:0002780;4.25e-16;41!UBERON:0001890;4.25e-16;41!UBERON:0002619;9.28e-15;22!UBERON:0000073;4.54e-14;53!UBERON:0002616;4.54e-14;53!UBERON:0001950;2.39e-13;20!UBERON:0000955;8.73e-09;68!UBERON:0000125;1.33e-08;9!UBERON:0002308;1.33e-08;9!UBERON:0001017;2.42e-08;75!UBERON:0002420;4.30e-08;9!UBERON:0007245;4.30e-08;9!UBERON:0010009;4.30e-08;9!UBERON:0010011;4.30e-08;9!UBERON:0000454;4.30e-08;9!UBERON:0001016;2.82e-07;83!UBERON:0002298;4.16e-07;6!UBERON:0009663;9.33e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.03e-27,56;UBERON:0005068,5.03e-27,56;UBERON:0006241,5.03e-27,56;UBERON:0007135,5.03e-27,56;UBERON:0000073,2.40e-24,53;UBERON:0002616,2.40e-24,53;UBERON:0003528,8.54e-24,34;UBERON:0002020,8.54e-24,34;UBERON:0001893,9.64e-24,34;UBERON:0003075,8.59e-23,82;UBERON:0007284,8.59e-23,82;UBERON:0002780,2.01e-22,41;UBERON:0001890,2.01e-22,41;UBERON:0003080,2.01e-22,41;UBERON:0006240,2.01e-22,41;UBERON:0002791,5.90e-22,32;UBERON:0001869,7.61e-22,32;UBERON:0000025,1.86e-21,192;UBERON:0002346,1.19e-20,86;UBERON:0001017,1.40e-20,81;UBERON:0010314,7.09e-20,132;UBERON:0003056,1.59e-19,61;UBERON:0004111,2.21e-19,240;UBERON:0000955,7.59e-19,68;UBERON:0006238,7.59e-19,68;UBERON:0001016,2.91e-18,89;UBERON:0010371,1.15e-16,104;UBERON:0000956,2.02e-16,25;UBERON:0000203,2.02e-16,25;UBERON:0002619,7.15e-15,22;UBERON:0000119,1.59e-14,309;UBERON:0000483,5.12e-14,306;UBERON:0001950,1.84e-13,20;UBERON:0007023,6.35e-13,114;UBERON:0004121,1.46e-11,171;UBERON:0000924,1.46e-11,171;UBERON:0006601,1.46e-11,171;UBERON:0011216,1.62e-09,223;UBERON:0000125,5.72e-09,9;UBERON:0002308,5.72e-09,9;UBERON:0002420,1.32e-08,9;UBERON:0007245,1.32e-08,9;UBERON:0010009,1.32e-08,9;UBERON:0010011,1.32e-08,9;UBERON:0000454,1.32e-08,9;UBERON:0005423,2.77e-07,581;UBERON:0009663,4.00e-07,7;UBERON:0002298,4.53e-07,6;UBERON:0000922,8.90e-07,592 | |||
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| |||
|short_description=p4@SCHIP1 | |||
}} |
Latest revision as of 09:29, 16 September 2015
Short description: | p4@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCHIP1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -41bp_to_uc010hvz.1_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 7.62e-09 | 45 |
endothelial cell of vascular tree | 2.09e-08 | 24 |
endothelial cell | 5.89e-08 | 36 |
lining cell | 5.35e-07 | 58 |
barrier cell | 5.35e-07 | 58 |