FFCP PHASE1:Hg19::chr16:3930681..3930721,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:3930681..3930721,-
|short_description=p1@CREBBP
|description=CAGE_peak_1_at_CREBBP_5end
|association_with_transcript=0bp_to_ENST00000262367_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1387 | |EntrezGene=1387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2348 | |HGNC=2348 | ||
|TSSclassifier=strong | |||
|UniProt=Q92793 | |UniProt=Q92793 | ||
|association_with_transcript=0bp_to_ENST00000262367_5end | |||
|cluster_id=chr16:3930681..3930721,- | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_CREBBP_5end | |||
|id=chr16:3930681..3930721,- | |||
|ontology_enrichment_celltype=CL:0002057!1.33e-21!42;CL:0000738!2.20e-20!140;CL:0000860!6.12e-20!45;CL:0000766!7.80e-17!76;CL:0002031!3.64e-16!124;CL:0002087!1.03e-15!119;CL:0000557!5.69e-14!71;CL:0000037!1.17e-13!172;CL:0000566!1.17e-13!172;CL:0002009!4.18e-13!65;CL:0000988!8.82e-13!182;CL:0000839!1.26e-12!70;CL:0002032!2.62e-12!165;CL:0000837!2.62e-12!165;CL:0002194!2.65e-12!63;CL:0000576!2.65e-12!63;CL:0000040!2.65e-12!63;CL:0000559!2.65e-12!63;CL:0000763!4.66e-09!112;CL:0000049!4.66e-09!112;CL:0000791!5.01e-07!18;CL:0000789!5.01e-07!18;CL:0002420!5.01e-07!18;CL:0002419!5.01e-07!18;CL:0000790!5.01e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.43e-18;33!CL:0002057;2.43e-18;33!CL:0000576;6.93e-12;48!CL:0000473;1.03e-11;39!CL:0000234;1.03e-11;39!CL:0000766;4.84e-09;69!CL:0002087;3.99e-07;104!CL:0000791;6.07e-07;18!CL:0000789;6.07e-07;18!CL:0002419;6.07e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.33e-21,42;CL:0002057,1.33e-21,42;CL:0000738,2.56e-21,136;CL:0000766,3.56e-18,72;CL:0000473,3.41e-17,48;CL:0000234,3.41e-17,48;CL:0002031,5.05e-17,120;CL:0002087,1.39e-16,115;CL:0000557,3.50e-15,67;CL:0002009,2.43e-14,61;CL:0000037,3.09e-14,168;CL:0000839,9.52e-14,66;CL:0002194,1.66e-13,59;CL:0000576,1.66e-13,59;CL:0000040,1.66e-13,59;CL:0000559,1.66e-13,59;CL:0000988,3.09e-13,177;CL:0002032,7.34e-13,161;CL:0000837,7.34e-13,161;CL:0000763,1.22e-09,108;CL:0000049,1.22e-09,108;CL:0000791,5.01e-07,18;CL:0000789,5.01e-07,18;CL:0002420,5.01e-07,18;CL:0002419,5.01e-07,18;CL:0000790,5.01e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.26e-16;42!CL:0000790;6.07e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-25!115;UBERON:0002390!1.66e-16!102;UBERON:0003061!1.66e-16!102;UBERON:0002193!1.26e-14!112;UBERON:0001049!1.14e-11!57;UBERON:0005068!1.14e-11!57;UBERON:0006241!1.14e-11!57;UBERON:0007135!1.14e-11!57;UBERON:0002371!4.96e-11!80;UBERON:0001474!1.17e-10!86;UBERON:0001017!4.64e-10!82;UBERON:0005743!1.41e-09!86;UBERON:0002616!1.78e-09!59;UBERON:0002405!2.30e-09!115;UBERON:0000955!5.12e-09!69;UBERON:0006238!5.12e-09!69;UBERON:0003080!1.51e-08!42;UBERON:0002780!1.75e-08!41;UBERON:0001890!1.75e-08!41;UBERON:0006240!1.75e-08!41;UBERON:0000073!1.81e-08!94;UBERON:0001016!1.81e-08!94;UBERON:0002346!2.29e-08!90;UBERON:0001893!5.10e-08!34;UBERON:0002791!5.53e-08!33;UBERON:0003075!6.30e-08!86;UBERON:0007284!6.30e-08!86;UBERON:0002020!6.34e-08!34;UBERON:0003528!6.34e-08!34;UBERON:0004765!1.44e-07!101;UBERON:0001434!1.44e-07!101;UBERON:0001869!2.63e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.75e-07;114!UBERON:0002791;5.96e-07;32!UBERON:0000073;7.81e-07;53!UBERON:0002616;7.81e-07;53!UBERON:0001893;8.28e-07;34!UBERON:0003528;9.28e-07;34!UBERON:0002020;9.28e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.43e-25,114;UBERON:0002390,1.56e-17,98;UBERON:0003061,1.56e-17,98;UBERON:0002193,1.74e-15,108;UBERON:0002371,6.32e-12,76;UBERON:0001049,1.32e-11,56;UBERON:0005068,1.32e-11,56;UBERON:0006241,1.32e-11,56;UBERON:0007135,1.32e-11,56;UBERON:0002405,1.74e-11,93;UBERON:0001474,1.77e-11,82;UBERON:0000073,5.45e-11,53;UBERON:0002616,5.45e-11,53;UBERON:0001017,5.63e-10,81;UBERON:0000955,6.16e-09,68;UBERON:0006238,6.16e-09,68;UBERON:0001016,8.98e-09,89;UBERON:0002346,9.22e-09,86;UBERON:0004765,1.45e-08,90;UBERON:0002780,1.75e-08,41;UBERON:0001890,1.75e-08,41;UBERON:0003080,1.75e-08,41;UBERON:0006240,1.75e-08,41;UBERON:0003075,2.56e-08,82;UBERON:0007284,2.56e-08,82;UBERON:0001893,5.10e-08,34;UBERON:0003528,6.34e-08,34;UBERON:0002020,6.34e-08,34;UBERON:0001434,1.06e-07,100;UBERON:0002791,1.19e-07,32;UBERON:0001869,2.63e-07,32 | |||
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28584 | ||
|short_description=p1@CREBBP | |||
}} | }} |
Latest revision as of 15:19, 16 September 2015
Short description: | p1@CREBBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CREBBP_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000262367_5end |
EntrezGene: | CREBBP |
HGNC: | 2348 |
UniProt: | Q92793 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.33e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-21 | 42 |
leukocyte | 2.56e-21 | 136 |
myeloid leukocyte | 3.56e-18 | 72 |
defensive cell | 3.41e-17 | 48 |
phagocyte | 3.41e-17 | 48 |
hematopoietic lineage restricted progenitor cell | 5.05e-17 | 120 |
nongranular leukocyte | 1.39e-16 | 115 |
granulocyte monocyte progenitor cell | 3.50e-15 | 67 |
macrophage dendritic cell progenitor | 2.43e-14 | 61 |
hematopoietic stem cell | 3.09e-14 | 168 |
myeloid lineage restricted progenitor cell | 9.52e-14 | 66 |
monopoietic cell | 1.66e-13 | 59 |
monocyte | 1.66e-13 | 59 |
monoblast | 1.66e-13 | 59 |
promonocyte | 1.66e-13 | 59 |
hematopoietic cell | 3.09e-13 | 177 |
hematopoietic oligopotent progenitor cell | 7.34e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.34e-13 | 161 |
myeloid cell | 1.22e-09 | 108 |
common myeloid progenitor | 1.22e-09 | 108 |
mature alpha-beta T cell | 5.01e-07 | 18 |
alpha-beta T cell | 5.01e-07 | 18 |
immature T cell | 5.01e-07 | 18 |
mature T cell | 5.01e-07 | 18 |
immature alpha-beta T cell | 5.01e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.43e-25 | 114 |
hematopoietic system | 1.56e-17 | 98 |
blood island | 1.56e-17 | 98 |
hemolymphoid system | 1.74e-15 | 108 |
bone marrow | 6.32e-12 | 76 |
neural tube | 1.32e-11 | 56 |
neural rod | 1.32e-11 | 56 |
future spinal cord | 1.32e-11 | 56 |
neural keel | 1.32e-11 | 56 |
immune system | 1.74e-11 | 93 |
bone element | 1.77e-11 | 82 |
regional part of nervous system | 5.45e-11 | 53 |
regional part of brain | 5.45e-11 | 53 |
central nervous system | 5.63e-10 | 81 |
brain | 6.16e-09 | 68 |
future brain | 6.16e-09 | 68 |
nervous system | 8.98e-09 | 89 |
neurectoderm | 9.22e-09 | 86 |
skeletal element | 1.45e-08 | 90 |
regional part of forebrain | 1.75e-08 | 41 |
forebrain | 1.75e-08 | 41 |
anterior neural tube | 1.75e-08 | 41 |
future forebrain | 1.75e-08 | 41 |
neural plate | 2.56e-08 | 82 |
presumptive neural plate | 2.56e-08 | 82 |
telencephalon | 5.10e-08 | 34 |
brain grey matter | 6.34e-08 | 34 |
gray matter | 6.34e-08 | 34 |
skeletal system | 1.06e-07 | 100 |
regional part of telencephalon | 1.19e-07 | 32 |
cerebral hemisphere | 2.63e-07 | 32 |