FFCP PHASE1:Hg19::chr1:14075903..14075940,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7799 | |EntrezGene=7799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9347 | |HGNC=9347 | ||
|TSSclassifier=strong | |||
|UniProt=Q5THJ1,D6RJM6,D6RED5 | |UniProt=Q5THJ1,D6RJM6,D6RED5 | ||
|association_with_transcript=0bp_to_ENST00000343137,ENST00000407521,ENST00000491815,ENST00000503842,ENST00000505823_5end | |association_with_transcript=0bp_to_ENST00000343137,ENST00000407521,ENST00000491815,ENST00000503842,ENST00000505823_5end | ||
|cluster_id=chr1:14075903..14075940,+ | |||
|coexpression_cluster_id=C176 | |coexpression_cluster_id=C176 | ||
|description=CAGE_peak_1_at_PRDM2_5end | |description=CAGE_peak_1_at_PRDM2_5end | ||
|id=chr1:14075903..14075940,+ | |id=chr1:14075903..14075940,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.88e-38!140;CL:0000037!4.43e-35!172;CL:0000566!4.43e-35!172;CL:0002032!5.95e-33!165;CL:0000837!5.95e-33!165;CL:0000988!5.89e-30!182;CL:0002031!1.51e-29!124;CL:0002087!4.41e-28!119;CL:0000766!1.70e-21!76;CL:0002057!1.44e-20!42;CL:0000763!1.55e-20!112;CL:0000049!1.55e-20!112;CL:0000557!1.89e-18!71;CL:0000860!1.19e-17!45;CL:0000839!4.31e-17!70;CL:0002009!3.66e-16!65;CL:0002194!2.92e-15!63;CL:0000576!2.92e-15!63;CL:0000040!2.92e-15!63;CL:0000559!2.92e-15!63;CL:0000542!1.80e-11!53;CL:0000051!1.80e-11!53;CL:0000838!1.98e-11!52;CL:0000791!3.25e-07!18;CL:0000789!3.25e-07!18;CL:0002420!3.25e-07!18;CL:0002419!3.25e-07!18;CL:0000790!3.25e-07!18 | |ontology_enrichment_celltype=CL:0000738!5.88e-38!140;CL:0000037!4.43e-35!172;CL:0000566!4.43e-35!172;CL:0002032!5.95e-33!165;CL:0000837!5.95e-33!165;CL:0000988!5.89e-30!182;CL:0002031!1.51e-29!124;CL:0002087!4.41e-28!119;CL:0000766!1.70e-21!76;CL:0002057!1.44e-20!42;CL:0000763!1.55e-20!112;CL:0000049!1.55e-20!112;CL:0000557!1.89e-18!71;CL:0000860!1.19e-17!45;CL:0000839!4.31e-17!70;CL:0002009!3.66e-16!65;CL:0002194!2.92e-15!63;CL:0000576!2.92e-15!63;CL:0000040!2.92e-15!63;CL:0000559!2.92e-15!63;CL:0000542!1.80e-11!53;CL:0000051!1.80e-11!53;CL:0000838!1.98e-11!52;CL:0000791!3.25e-07!18;CL:0000789!3.25e-07!18;CL:0002420!3.25e-07!18;CL:0002419!3.25e-07!18;CL:0000790!3.25e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.28e-17;33!CL:0002057;3.28e-17;33!CL:0000576;5.39e-13;48!CL:0000473;7.53e-13;39!CL:0000234;7.53e-13;39!CL:0000766;6.71e-11;69!CL:0002087;3.78e-10;104!CL:0000738;5.35e-09;136!CL:0000542;2.92e-07;53!CL:0000791;3.19e-07;18!CL:0000789;3.19e-07;18!CL:0002419;3.19e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.91e-40,136;CL:0000037,5.92e-37,168;CL:0002032,8.41e-35,161;CL:0000837,8.41e-35,161;CL:0000988,3.80e-32,177;CL:0002031,1.17e-31,120;CL:0002087,3.52e-30,115;CL:0000766,6.52e-24,72;CL:0000763,2.75e-22,108;CL:0000049,2.75e-22,108;CL:0000557,1.02e-20,67;CL:0000860,1.44e-20,42;CL:0002057,1.44e-20,42;CL:0000839,2.96e-19,66;CL:0000473,1.45e-18,48;CL:0000234,1.45e-18,48;CL:0002009,2.34e-18,61;CL:0002194,2.06e-17,59;CL:0000576,2.06e-17,59;CL:0000040,2.06e-17,59;CL:0000559,2.06e-17,59;CL:0000542,1.80e-11,53;CL:0000051,1.80e-11,53;CL:0000838,1.98e-11,52;CL:0000791,3.25e-07,18;CL:0000789,3.25e-07,18;CL:0002420,3.25e-07,18;CL:0002419,3.25e-07,18;CL:0000790,3.25e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.32e-15;42!CL:0000051;2.92e-07;53!CL:0000790;3.19e-07;18!CL:0000049;9.20e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.16e-33!115;UBERON:0001049!3.37e-19!57;UBERON:0005068!3.37e-19!57;UBERON:0006241!3.37e-19!57;UBERON:0007135!3.37e-19!57;UBERON:0002390!1.72e-18!102;UBERON:0003061!1.72e-18!102;UBERON:0003080!2.60e-17!42;UBERON:0002780!4.19e-17!41;UBERON:0001890!4.19e-17!41;UBERON:0006240!4.19e-17!41;UBERON:0002193!5.82e-16!112;UBERON:0002616!1.27e-15!59;UBERON:0001017!3.15e-15!82;UBERON:0000955!2.45e-14!69;UBERON:0006238!2.45e-14!69;UBERON:0001893!4.88e-14!34;UBERON:0002020!5.46e-14!34;UBERON:0003528!5.46e-14!34;UBERON:0002371!6.84e-14!80;UBERON:0001474!1.30e-13!86;UBERON:0002791!1.36e-13!33;UBERON:0005743!1.99e-13!86;UBERON:0001869!2.83e-13!32;UBERON:0002619!3.33e-12!22;UBERON:0000073!8.71e-12!94;UBERON:0001016!8.71e-12!94;UBERON:0001950!2.51e-11!20;UBERON:0004765!3.67e-10!101;UBERON:0001434!3.67e-10!101;UBERON:0000956!4.62e-10!25;UBERON:0000203!4.62e-10!25;UBERON:0002405!7.51e-09!115;UBERON:0003075!3.87e-08!86;UBERON:0007284!3.87e-08!86;UBERON:0002346!5.08e-08!90 | |ontology_enrichment_uberon=UBERON:0007023!3.16e-33!115;UBERON:0001049!3.37e-19!57;UBERON:0005068!3.37e-19!57;UBERON:0006241!3.37e-19!57;UBERON:0007135!3.37e-19!57;UBERON:0002390!1.72e-18!102;UBERON:0003061!1.72e-18!102;UBERON:0003080!2.60e-17!42;UBERON:0002780!4.19e-17!41;UBERON:0001890!4.19e-17!41;UBERON:0006240!4.19e-17!41;UBERON:0002193!5.82e-16!112;UBERON:0002616!1.27e-15!59;UBERON:0001017!3.15e-15!82;UBERON:0000955!2.45e-14!69;UBERON:0006238!2.45e-14!69;UBERON:0001893!4.88e-14!34;UBERON:0002020!5.46e-14!34;UBERON:0003528!5.46e-14!34;UBERON:0002371!6.84e-14!80;UBERON:0001474!1.30e-13!86;UBERON:0002791!1.36e-13!33;UBERON:0005743!1.99e-13!86;UBERON:0001869!2.83e-13!32;UBERON:0002619!3.33e-12!22;UBERON:0000073!8.71e-12!94;UBERON:0001016!8.71e-12!94;UBERON:0001950!2.51e-11!20;UBERON:0004765!3.67e-10!101;UBERON:0001434!3.67e-10!101;UBERON:0000956!4.62e-10!25;UBERON:0000203!4.62e-10!25;UBERON:0002405!7.51e-09!115;UBERON:0003075!3.87e-08!86;UBERON:0007284!3.87e-08!86;UBERON:0002346!5.08e-08!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.52e-12;41!UBERON:0001890;1.52e-12;41!UBERON:0002619;3.23e-12;22!UBERON:0001893;4.39e-12;34!UBERON:0001869;5.28e-12;32!UBERON:0003528;5.38e-12;34!UBERON:0002020;5.38e-12;34!UBERON:0002791;6.19e-12;32!UBERON:0001950;2.45e-11;20!UBERON:0000073;1.27e-10;53!UBERON:0002616;1.27e-10;53!UBERON:0000956;4.06e-10;25!UBERON:0000203;4.06e-10;25!UBERON:0007023;2.01e-09;114!UBERON:0001017;1.13e-07;75!UBERON:0000955;3.11e-07;68 | |||
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2611104 | ||
|short_description=p1@PRDM2 | |short_description=p1@PRDM2 | ||
}} | }} |
Latest revision as of 16:05, 16 September 2015
Short description: | p1@PRDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRDM2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000343137, ENST00000407521, ENST00000491815, ENST00000503842, ENST00000505823_5end |
EntrezGene: | PRDM2 |
HGNC: | 9347 |
UniProt: | Q5THJ1D6RJM6D6RED5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-32 | 114 |
hematopoietic system | 3.15e-20 | 98 |
blood island | 3.15e-20 | 98 |
neural tube | 5.69e-19 | 56 |
neural rod | 5.69e-19 | 56 |
future spinal cord | 5.69e-19 | 56 |
neural keel | 5.69e-19 | 56 |
regional part of nervous system | 1.23e-17 | 53 |
regional part of brain | 1.23e-17 | 53 |
hemolymphoid system | 2.01e-17 | 108 |
regional part of forebrain | 4.19e-17 | 41 |
forebrain | 4.19e-17 | 41 |
anterior neural tube | 4.19e-17 | 41 |
future forebrain | 4.19e-17 | 41 |
bone marrow | 1.43e-15 | 76 |
bone element | 3.50e-15 | 82 |
central nervous system | 5.39e-15 | 81 |
immune system | 2.74e-14 | 93 |
brain | 4.17e-14 | 68 |
future brain | 4.17e-14 | 68 |
telencephalon | 4.88e-14 | 34 |
brain grey matter | 5.46e-14 | 34 |
gray matter | 5.46e-14 | 34 |
cerebral hemisphere | 2.83e-13 | 32 |
regional part of telencephalon | 3.25e-13 | 32 |
nervous system | 4.22e-13 | 89 |
regional part of cerebral cortex | 3.33e-12 | 22 |
skeletal element | 6.14e-12 | 90 |
neocortex | 2.51e-11 | 20 |
cerebral cortex | 4.62e-10 | 25 |
pallium | 4.62e-10 | 25 |
skeletal system | 5.23e-10 | 100 |
neural plate | 1.66e-08 | 82 |
presumptive neural plate | 1.66e-08 | 82 |
neurectoderm | 2.28e-08 | 86 |