FFCP PHASE1:Hg19::chr1:145610717..145610730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27246 | |EntrezGene=27246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18154 | |HGNC=18154 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4L5 | |UniProt=Q9Y4L5 | ||
|association_with_transcript=-305bp_to_ENST00000369291,NM_014455,uc001eoj.2,uc001eok.2,uc009wiy.2_5end | |association_with_transcript=-305bp_to_ENST00000369291,NM_014455,uc001eoj.2,uc001eok.2,uc009wiy.2_5end | ||
|cluster_id=chr1:145610717..145610730,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_RNF115_5end | |description=CAGE_peak_4_at_RNF115_5end | ||
|id=chr1:145610717..145610730,+ | |id=chr1:145610717..145610730,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.23e-36!42;CL:0002009!2.22e-35!65;CL:0000557!7.58e-35!71;CL:0002194!1.10e-33!63;CL:0000576!1.10e-33!63;CL:0000040!1.10e-33!63;CL:0000559!1.10e-33!63;CL:0000860!1.82e-32!45;CL:0000839!2.60e-32!70;CL:0000766!6.75e-32!76;CL:0000763!5.42e-24!112;CL:0000049!5.42e-24!112;CL:0000738!3.71e-20!140;CL:0002031!5.79e-19!124;CL:0002087!1.70e-18!119;CL:0002032!1.91e-15!165;CL:0000837!1.91e-15!165;CL:0000037!2.19e-15!172;CL:0000566!2.19e-15!172;CL:0000988!7.72e-14!182;CL:0002393!3.87e-08!9;CL:0002397!3.87e-08!9;CL:0000134!2.40e-07!358 | |ontology_enrichment_celltype=CL:0002057!2.23e-36!42;CL:0002009!2.22e-35!65;CL:0000557!7.58e-35!71;CL:0002194!1.10e-33!63;CL:0000576!1.10e-33!63;CL:0000040!1.10e-33!63;CL:0000559!1.10e-33!63;CL:0000860!1.82e-32!45;CL:0000839!2.60e-32!70;CL:0000766!6.75e-32!76;CL:0000763!5.42e-24!112;CL:0000049!5.42e-24!112;CL:0000738!3.71e-20!140;CL:0002031!5.79e-19!124;CL:0002087!1.70e-18!119;CL:0002032!1.91e-15!165;CL:0000837!1.91e-15!165;CL:0000037!2.19e-15!172;CL:0000566!2.19e-15!172;CL:0000988!7.72e-14!182;CL:0002393!3.87e-08!9;CL:0002397!3.87e-08!9;CL:0000134!2.40e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.65e-111;33!CL:0002057;2.65e-111;33!CL:0000473;1.11e-81;39!CL:0000234;1.11e-81;39!CL:0000576;5.43e-75;48!CL:0000766;3.01e-45;69!CL:0000763;4.27e-22;100!CL:0002087;1.75e-16;104!CL:0002393;5.15e-16;6!CL:0002397;5.15e-16;6!CL:0000738;6.49e-16;136!CL:0000840;1.03e-10;5!CL:0001014;3.60e-09;2!CL:0001016;3.60e-09;2!CL:0000988;4.50e-08;177!CL:0000219;8.56e-08;193!CL:0000990;3.63e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.82e-134,42;CL:0002057,7.82e-134,42;CL:0000473,1.82e-122,48;CL:0000234,1.82e-122,48;CL:0002009,1.98e-119,61;CL:0000557,1.42e-113,67;CL:0002194,4.35e-112,59;CL:0000576,4.35e-112,59;CL:0000040,4.35e-112,59;CL:0000559,4.35e-112,59;CL:0000839,9.79e-105,66;CL:0000766,4.91e-100,72;CL:0000763,1.16e-70,108;CL:0000049,1.16e-70,108;CL:0002031,8.41e-60,120;CL:0000738,2.55e-54,136;CL:0002087,1.23e-53,115;CL:0002032,1.71e-44,161;CL:0000837,1.71e-44,161;CL:0000037,2.92e-42,168;CL:0000988,1.19e-39,177;CL:0000134,4.10e-16,354;CL:0002320,1.30e-15,361;CL:0002393,6.94e-15,9;CL:0002397,6.94e-15,9;CL:0000219,7.46e-14,386;CL:0000048,1.07e-11,427;CL:0000723,2.11e-11,433;CL:0000034,5.12e-11,441;CL:0000840,7.43e-11,5;CL:0001029,7.43e-11,5;CL:0001014,3.53e-09,2;CL:0001016,3.53e-09,2;CL:0000990,2.94e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-95;42!CL:0000049;8.83e-20;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.66e-29!80;UBERON:0001474!9.77e-28!86;UBERON:0002390!4.42e-25!102;UBERON:0003061!4.42e-25!102;UBERON:0002405!2.70e-24!115;UBERON:0004765!1.15e-23!101;UBERON:0001434!1.15e-23!101;UBERON:0002193!1.60e-22!112;UBERON:0002204!5.91e-10!167;UBERON:0003081!1.56e-08!216;UBERON:0000062!5.46e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!6.66e-29!80;UBERON:0001474!9.77e-28!86;UBERON:0002390!4.42e-25!102;UBERON:0003061!4.42e-25!102;UBERON:0002405!2.70e-24!115;UBERON:0004765!1.15e-23!101;UBERON:0001434!1.15e-23!101;UBERON:0002193!1.60e-22!112;UBERON:0002204!5.91e-10!167;UBERON:0003081!1.56e-08!216;UBERON:0000062!5.46e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.12e-99,76;UBERON:0001474,2.14e-91,82;UBERON:0004765,1.48e-82,90;UBERON:0002405,1.25e-79,93;UBERON:0002390,3.84e-75,98;UBERON:0003061,3.84e-75,98;UBERON:0001434,1.80e-73,100;UBERON:0002193,2.11e-67,108;UBERON:0002204,1.81e-40,167;UBERON:0003081,1.93e-33,203;UBERON:0000926,3.29e-18,315;UBERON:0004120,3.29e-18,315;UBERON:0006603,3.29e-18,315;UBERON:0002384,6.22e-15,371;UBERON:0000923,9.22e-08,560;UBERON:0010316,9.22e-08,560;UBERON:0005291,9.22e-08,560;UBERON:0006598,9.22e-08,560;UBERON:0010317,9.22e-08,560;UBERON:0002532,9.22e-08,560;UBERON:0002050,1.23e-07,564;UBERON:0005423,4.06e-07,581;UBERON:0000922,8.49e-07,592 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0,0.152826811495903,0.164201178899891,0.236132343941038,0,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,2.76997704265939,2.20598892217156,0.868043482863407,0.895661896959697,0,0,2.61716829803216,1.13362783106643,3.39617685662943,3.71886459049095,1.6446715520873,5.88442104700697,7.48000220037591,5.37937483711111,7.09446689665756,3.44745680736619,3.22742341791913,2.70852973188684,4.70605848856512,4.09359225086769,2.9214052977861,2.14258724659632,3.53021929783703,3.19668562899521,5.60747210317417,7.97854630486527,7.6720455095885,2.32167390902867,2.8369261234557,4.35975574296902,8.54245461872927,14.0800387973454,5.86409880703815,4.23779651843358,4.05105399586321,4.43047342417238,1.05627643155971,1.27562579979026,1.25795187305026,1.23561494261145,1.50176892841506,0.32145117339416,0.570025487482497,0.39783335439818,2.00930569141097,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.261958150995425,0,0,1.9472843619281,0.522389211897802,1.72845348674525,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.435758888184812,0,0.674156540800822,0.392442930250692,0,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0.492434012174795,0.936017060556951,0.743155811443641,0.93733833986777,0,0.283550194484773,0,0,0,0.985326475791887,0,0,4.4677185559258,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0,0.120859449591622,0,0,0,0.364182336013434,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0.183138929636687,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,1.3420566473545,0.667396566847634,0,0.278406173895242,0,0,0,0,0,0.439524537815682,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0.503865495708552,0.102268682502155,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.591095237907095,0.219385397153973,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.23056390438806,0.0897576444097721,0,0.31900115973192,0,0,0,0.31396051279005,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0.821425535170343,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0.0882561266915003,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0.160317640503067,0.426905989478705,0,0.144090417154106,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0.13480708770837,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,3.82455615637551,2.32140586367385,0.121499113316049,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0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| ||
|short_description=p4@RNF115 | |short_description=p4@RNF115 | ||
}} | }} |
Latest revision as of 18:45, 16 September 2015
Short description: | p4@RNF115 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF115_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -305bp_to_ENST00000369291, NM_014455, uc001eoj.2, uc001eok.2, uc009wiy.2_5end |
EntrezGene: | RNF115 |
HGNC: | 18154 |
UniProt: | Q9Y4L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.12e-99 | 76 |
bone element | 2.14e-91 | 82 |
skeletal element | 1.48e-82 | 90 |
immune system | 1.25e-79 | 93 |
hematopoietic system | 3.84e-75 | 98 |
blood island | 3.84e-75 | 98 |
skeletal system | 1.80e-73 | 100 |
hemolymphoid system | 2.11e-67 | 108 |
musculoskeletal system | 1.81e-40 | 167 |
lateral plate mesoderm | 1.93e-33 | 203 |
mesoderm | 3.29e-18 | 315 |
mesoderm-derived structure | 3.29e-18 | 315 |
presumptive mesoderm | 3.29e-18 | 315 |
connective tissue | 6.22e-15 | 371 |
germ layer | 9.22e-08 | 560 |
germ layer / neural crest | 9.22e-08 | 560 |
embryonic tissue | 9.22e-08 | 560 |
presumptive structure | 9.22e-08 | 560 |
germ layer / neural crest derived structure | 9.22e-08 | 560 |
epiblast (generic) | 9.22e-08 | 560 |
embryonic structure | 1.23e-07 | 564 |
developing anatomical structure | 4.06e-07 | 581 |
embryo | 8.49e-07 | 592 |