FFCP PHASE1:Hg19::chr11:131780577..131780620,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:131780577..131780620,+ to FFCP PHASE1:Hg19::chr11:131780577..131780620,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P121 | |UniProt=Q9P121 | ||
|association_with_transcript=-91bp_to_NM_001144058,NM_001144059,NM_016522,uc001qgo.2,uc001qgp.2,uc001qgq.2_5end | |||
|cluster_id=chr11:131780577..131780620,+ | |||
|description=CAGE_peak_3_at_NTM_5end | |||
|id=chr11:131780577..131780620,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-23!180;CL:0000057!1.55e-13!75;CL:0000680!1.13e-11!57;CL:0000056!1.13e-11!57;CL:0000355!1.13e-11!57;CL:0000359!6.38e-11!32;CL:0000192!6.56e-11!42;CL:0000514!6.56e-11!42;CL:0000187!9.01e-11!54;CL:0000183!7.28e-10!59;CL:0000393!1.58e-09!60;CL:0000211!1.58e-09!60;CL:0002620!8.00e-07!23;CL:0002334!8.46e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.44e-11;32!CL:0002334;3.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.51e-13,76;CL:0000359,1.89e-11,32;CL:0002334,2.88e-09,12;CL:0000192,2.09e-07,43;CL:0000514,2.09e-07,43;CL:0000680,5.93e-07,58;CL:0000056,5.93e-07,58;CL:0000355,5.93e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.94e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.15e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.15e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!9.33e-19!365;UBERON:0002346!5.19e-17!90;UBERON:0000033!8.30e-17!123;UBERON:0000153!8.81e-17!129;UBERON:0007811!8.81e-17!129;UBERON:0001049!1.37e-16!57;UBERON:0005068!1.37e-16!57;UBERON:0006241!1.37e-16!57;UBERON:0007135!1.37e-16!57;UBERON:0002616!2.51e-16!59;UBERON:0003075!2.69e-16!86;UBERON:0007284!2.69e-16!86;UBERON:0002619!3.44e-16!22;UBERON:0000119!1.50e-15!312;UBERON:0001017!2.58e-15!82;UBERON:0001950!2.59e-15!20;UBERON:0000955!3.34e-15!69;UBERON:0006238!3.34e-15!69;UBERON:0000483!3.40e-15!309;UBERON:0005743!3.54e-15!86;UBERON:0000956!1.60e-14!25;UBERON:0000203!1.60e-14!25;UBERON:0001869!1.99e-14!32;UBERON:0001893!2.77e-14!34;UBERON:0000914!3.97e-14!83;UBERON:0002329!3.97e-14!83;UBERON:0003077!3.97e-14!83;UBERON:0003059!3.97e-14!83;UBERON:0007282!3.97e-14!83;UBERON:0009618!3.97e-14!83;UBERON:0007285!3.97e-14!83;UBERON:0002020!4.97e-14!34;UBERON:0003528!4.97e-14!34;UBERON:0002780!9.09e-14!41;UBERON:0001890!9.09e-14!41;UBERON:0006240!9.09e-14!41;UBERON:0000481!1.39e-13!347;UBERON:0002791!1.40e-13!33;UBERON:0000924!1.52e-13!173;UBERON:0006601!1.52e-13!173;UBERON:0000073!2.35e-13!94;UBERON:0001016!2.35e-13!94;UBERON:0003080!4.54e-13!42;UBERON:0004121!7.11e-13!169;UBERON:0002385!2.04e-12!63;UBERON:0001015!2.04e-12!63;UBERON:0000383!2.04e-12!63;UBERON:0000025!3.26e-12!194;UBERON:0001134!3.54e-12!61;UBERON:0002036!3.54e-12!61;UBERON:0003082!3.54e-12!61;UBERON:0003056!4.56e-12!61;UBERON:0000477!4.94e-12!286;UBERON:0004290!8.59e-12!70;UBERON:0000486!1.41e-11!82;UBERON:0007023!2.07e-11!115;UBERON:0004111!1.21e-10!241;UBERON:0000468!3.04e-10!659;UBERON:0000467!4.97e-09!625;UBERON:0004872!6.00e-09!84;UBERON:0000480!6.97e-09!626;UBERON:0001637!7.58e-09!42;UBERON:0003509!7.58e-09!42;UBERON:0004572!7.58e-09!42;UBERON:0001981!9.38e-09!60;UBERON:0007500!9.38e-09!60;UBERON:0004537!9.38e-09!60;UBERON:0006965!9.38e-09!60;UBERON:0000922!4.26e-07!612;UBERON:0000479!4.61e-07!787;UBERON:0002049!5.41e-07!79;UBERON:0007798!5.41e-07!79;UBERON:0004573!7.19e-07!33;UBERON:0004571!7.19e-07!33;UBERON:0002050!9.33e-07!605;UBERON:0005423!9.33e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.13e-22;22!UBERON:0001950;2.65e-21;20!UBERON:0000956;5.20e-19;25!UBERON:0000203;5.20e-19;25!UBERON:0001869;4.57e-16;32!UBERON:0002791;1.43e-14;32!UBERON:0001893;1.95e-14;34!UBERON:0003528;3.69e-14;34!UBERON:0002020;3.69e-14;34!UBERON:0002780;7.64e-10;41!UBERON:0001890;7.64e-10;41!UBERON:0000073;2.14e-09;53!UBERON:0002616;2.14e-09;53!UBERON:0000200;5.15e-08;6!UBERON:0001017;1.16e-07;75!UBERON:0001871;1.17e-07;6!UBERON:0004573;1.91e-07;33!UBERON:0004571;1.91e-07;33!UBERON:0000955;7.03e-07;68 | |||
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| ||
|short_description=p3@NTM | |||
}} | }} |
Latest revision as of 19:03, 16 September 2015
Short description: | p3@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NTM_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_NM_001144058, NM_001144059, NM_016522, uc001qgo.2, uc001qgp.2, uc001qgq.2_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | Q9P121 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.51e-13 | 76 |
vascular associated smooth muscle cell | 1.89e-11 | 32 |
preadipocyte | 2.88e-09 | 12 |
smooth muscle cell | 2.09e-07 | 43 |
smooth muscle myoblast | 2.09e-07 | 43 |
muscle precursor cell | 5.93e-07 | 58 |
myoblast | 5.93e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.15e-09 | 14 |