FFCP PHASE1:Hg19::chr20:4804113..4804127,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9770 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9883 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000474232,uc002wle.2_5end | |||
|cluster_id=chr20:4804113..4804127,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_RASSF2_5end | |||
|id=chr20:4804113..4804127,- | |||
|ontology_enrichment_celltype=CL:0000037!1.06e-48!172;CL:0000566!1.06e-48!172;CL:0000988!4.21e-47!182;CL:0002032!2.89e-46!165;CL:0000837!2.89e-46!165;CL:0000738!2.08e-43!140;CL:0000763!7.51e-38!112;CL:0000049!7.51e-38!112;CL:0002031!1.30e-33!124;CL:0002087!1.82e-32!119;CL:0000766!5.71e-32!76;CL:0000557!3.50e-28!71;CL:0000839!2.38e-26!70;CL:0002009!5.69e-25!65;CL:0002057!1.15e-24!42;CL:0002194!2.86e-24!63;CL:0000576!2.86e-24!63;CL:0000040!2.86e-24!63;CL:0000559!2.86e-24!63;CL:0000860!1.02e-20!45;CL:0000542!3.21e-08!53;CL:0000051!3.21e-08!53;CL:0000945!4.12e-08!24;CL:0000826!4.12e-08!24;CL:0000838!6.28e-08!52;CL:0000115!1.84e-07!35;CL:0000071!2.47e-07!18;CL:0002546!2.47e-07!18;CL:0002139!5.39e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.36e-20;33!CL:0002057;4.36e-20;33!CL:0000473;8.11e-19;39!CL:0000234;8.11e-19;39!CL:0000576;2.34e-18;48!CL:0000766;2.36e-16;69!CL:0000763;1.94e-13;100!CL:0002087;2.41e-11;104!CL:0000738;4.05e-11;136!CL:0000988;1.38e-09;177!CL:0000945;1.33e-08;24!CL:0000071;1.05e-07;18!CL:0002139;2.73e-07;24!CL:0000094;6.32e-07;8!CL:0000115;6.88e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.61e-55,168;CL:0000988,1.03e-53,177;CL:0002032,4.10e-53,161;CL:0000837,4.10e-53,161;CL:0000738,7.18e-49,136;CL:0000763,2.00e-44,108;CL:0000049,2.00e-44,108;CL:0002031,1.47e-38,120;CL:0000766,1.12e-37,72;CL:0002087,2.41e-37,115;CL:0000557,1.80e-33,67;CL:0000839,2.26e-31,66;CL:0002009,5.94e-30,61;CL:0002194,3.28e-29,59;CL:0000576,3.28e-29,59;CL:0000040,3.28e-29,59;CL:0000559,3.28e-29,59;CL:0000473,1.57e-28,48;CL:0000234,1.57e-28,48;CL:0000860,2.54e-26,42;CL:0002057,2.54e-26,42;CL:0000542,8.67e-09,53;CL:0000051,8.67e-09,53;CL:0000945,1.40e-08,24;CL:0000826,1.40e-08,24;CL:0000838,1.78e-08,52;CL:0000115,5.25e-08,36;CL:0000071,9.54e-08,18;CL:0002546,9.54e-08,18;CL:0002139,2.20e-07,24;CL:0000094,6.31e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.12e-19;42!CL:0000049;1.74e-12;108!CL:0002546;1.05e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.53e-07,51;DOID:0060083,4.53e-07,51;DOID:1240,5.64e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.56e-31!102;UBERON:0003061!4.56e-31!102;UBERON:0002193!4.90e-30!112;UBERON:0002371!9.04e-22!80;UBERON:0001474!1.87e-20!86;UBERON:0002405!2.93e-16!115;UBERON:0007023!8.20e-16!115;UBERON:0003081!1.02e-14!216;UBERON:0004765!7.86e-14!101;UBERON:0001434!7.86e-14!101;UBERON:0001049!3.03e-10!57;UBERON:0005068!3.03e-10!57;UBERON:0006241!3.03e-10!57;UBERON:0007135!3.03e-10!57;UBERON:0000178!3.83e-09!15;UBERON:0000179!3.83e-09!15;UBERON:0000463!3.83e-09!15;UBERON:0005743!1.09e-08!86;UBERON:0001017!1.23e-08!82;UBERON:0002780!8.32e-08!41;UBERON:0001890!8.32e-08!41;UBERON:0006240!8.32e-08!41;UBERON:0003080!1.09e-07!42;UBERON:0002616!1.67e-07!59;UBERON:0001986!2.47e-07!18;UBERON:0004638!2.47e-07!18;UBERON:0004852!2.47e-07!18;UBERON:0001893!3.26e-07!34;UBERON:0002020!3.33e-07!34;UBERON:0003528!3.33e-07!34;UBERON:0000955!3.85e-07!69;UBERON:0006238!3.85e-07!69;UBERON:0002791!5.43e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.13e-09;15!UBERON:0000179;1.13e-09;15!UBERON:0000463;1.13e-09;15!UBERON:0004638;1.05e-07;18!UBERON:0001986;1.05e-07;18!UBERON:0004852;1.05e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.81e-37,98;UBERON:0003061,2.81e-37,98;UBERON:0002193,3.30e-36,108;UBERON:0002405,1.15e-27,93;UBERON:0002371,5.06e-27,76;UBERON:0001474,7.28e-25,82;UBERON:0004765,2.40e-19,90;UBERON:0003081,2.29e-17,203;UBERON:0007023,4.21e-16,114;UBERON:0001434,2.86e-15,100;UBERON:0001049,1.46e-10,56;UBERON:0005068,1.46e-10,56;UBERON:0006241,1.46e-10,56;UBERON:0007135,1.46e-10,56;UBERON:0000178,1.10e-09,15;UBERON:0000179,1.10e-09,15;UBERON:0000463,1.10e-09,15;UBERON:0000073,1.69e-09,53;UBERON:0002616,1.69e-09,53;UBERON:0001017,1.06e-08,81;UBERON:0002780,5.25e-08,41;UBERON:0001890,5.25e-08,41;UBERON:0003080,5.25e-08,41;UBERON:0006240,5.25e-08,41;UBERON:0004638,9.54e-08,18;UBERON:0001986,9.54e-08,18;UBERON:0004852,9.54e-08,18;UBERON:0001893,1.28e-07,34;UBERON:0003528,1.31e-07,34;UBERON:0002020,1.31e-07,34;UBERON:0000955,2.63e-07,68;UBERON:0006238,2.63e-07,68;UBERON:0002791,6.25e-07,32;UBERON:0001869,8.53e-07,32;UBERON:0001016,8.80e-07,89 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.26858963686374,4.00293193412522,1.34088328328186,0.872338524100369,0,0,0.261185628199839,1.47440361900905,4.18680700783456,1.09220686065086,0,0,0,2.01697543935533,1.80808358407193,1.46062018077475,2.92759679274304,1.35433163884467,0.408001382488506,5.64218498660558,8.30084362680065,6.43309797842556,7.15593045690376,21.1665133921825,20.5251473624864,18.1821904834599,46.8103489450196,27.2518872649021,37.3106857191743,0,0,0,17.6625217323088,13.6482463187925,15.8544237240817,40.4416648228271,44.1197784434312,44.2702176260338,28.2133497542305,28.8265362756892,33.9999749277126,114.137617441958,68.3955458076745,69.8642096220911,97.8526245372932,44.4061319063572,29.4221052350348,53.2230925795978,44.0596415230053,21.9928473796384,68.2596447858505,50.3478053195384,47.3992703080196,93.7446850922171,50.4876377607015,24.0454128356241,74.3783858461293,59.3718700090773,38.9995646737415,95.6568770541477,48.0707414868133,38.3602275479425,55.7201738166881,37.4474248296152,25.5357122088186,58.2896903395644,54.2342235157009,32.1439490163573,44.7995631948693,46.4029821344332,25.6334533827116,16.4779123323315,24.236890196015,28.7232344346475,56.276644204394,60.8216416008101,75.3803001609306,16.2457263932512,19.891667719909,21.3717059904622,26.3994366691984,23.4839602842717,14.2321480618169,12.8019066769952,16.0158394814405,19.5415829584524,19.8313461835459,13.3567525634951,13.6611112586268,10.5702694086769,31.728677934394,7.93027971474155,10.6496626966492,12.3790519844286,1.96709770113833,4.71612915298998,3.70082698199117,3.00935691703221,0.32592226663359,0,1.94826728407911,11.9209188867136,2.94605907474837,4.2091439970888,5.41607727530031,4.22701355094728,9.49433237187111,12.9905944636904,20.1735512983669,13.0411388580774,1.92772532110679,2.40786745280742,6.27213142829861,14.1636678371958,3.44898444241729,4.12352934579156,7.33757106856558,7.64556994377832,5.85975108470777,5.70271226669025,7.82990619204418,8.31912972503719,12.4930726552346,7.81364931745256,4.92676798152628,4.43534835094411,7.2208852861547,2.75166367377318,0,1.34140171940727,4.73091478821062,0.361439152384566,0,0,0,0.486634870302636,0.661743720148475,0.221729397462564,0.790513071238134,11.1987109550544,0,0,9.7364218096405,8.00996791576629,8.24339355216964,17.40981557429,9.15191857248205,17.4585025624896,27.2304498092386,12.9035189265919,32.9783476527215,16.9592382577203,12.5849830862972,20.9089711874451,11.9127130925982,5.68516870172524,4.98072767761394,19.7485161531155,29.0037108318586,9.12326526862215,30.7518192510694,13.971197053143,25.1144003843345,14.2879565254528,15.4925267112057,9.79719880204903,9.19899824795299,20.8838445104988,24.1826301988138,279.374484964454,236.545961130478,0,0.496971951695318,0.12663051166458,0.529636723252875,0,1.06400514659507,0,0,0,0.311211035399766,3.09834545760283,0.817309515567294,1.05950199351452,1.15235184896,0,0,0,0,0,0,0,0,0,0.103325781175765,13.0680314301026,6.92347401979959,0,0,0.336672227908132,0.375355559615893,0.277064115484183,1.75591048352335,0.612975591598039,1.80285670687916,0.567160915800105,0.538168907066586,0.213557388818567,2.54318281391474,0,0.618315175430633,0,0.18611685633159,0.168776332241266,0.487185025805993,0.504867548488229,1.47279837827679,2.10139873864455,0,0.705264687593482,0.339121184620975,0,0,0,3.04934265323988,2.91565490307268,3.02104251460748,2.90250954043037,2.77552935963191,2.91981887260664,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0.473227200159376,0.168584690078102,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.674156540800822,0,0,11.8104872739944,2.80483547606892,1.2347220339942,4.41026134156626,0,1.96565443335525,2.95394953340702,0.882926198829301,0.122988438543114,0,0,0,0,0,0.977424915930974,0,0,3.70977295920246,0.234817388471643,2.88732895522148,2.31492756288305,1.71228737011138,0,0,13.7881523408942,5.38209809820247,22.2946743433092,0,0,0,0,0.290633938513962,0,10.8385912337108,28.439644186272,64.8937001642617,42.8036261648375,69.8120656847881,0.444485260045183,0.381988425558278,3.51652341630141,5.13217338068116,1.85089486865982,2.70308752059526,0.857479297891735,1.68196626518041,12.6428419961651,0.22001485746285,0.904902010304444,0,1.690605505112,12.7650295960738,4.16029747645464,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0.199945982364114,52.2982256757119,29.1309113030633,21.0833939483032,0,0,0,0.144781306667579,0.205476322550383,0,18.6061339029255,5.51686128565396,4.31255149719035,4.2353201972317,18.2948129440174,9.10978977003352,0.773288812777695,6.03058555203656,1.91381625495949,176.016650627588,191.463333890576,254.03670973629,0.12269149171914,0,0,10.6065139380712,3.56857977594324,8.04282316673067,4.56851518471581,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0,2.74514739048685,29.9813637878187,30.1999881146064,26.1482516618439,0,0,1.81434175997808,1.48864684691266,0.306923946576125,0.841980283299221,0.896974044789907,1.53512174720011,1.2868313691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| |||
|short_description=p2@RASSF2 | |||
}} |
Latest revision as of 19:06, 16 September 2015
Short description: | p2@RASSF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASSF2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -11bp_to_ENST00000474232, uc002wle.2_5end |
EntrezGene: | RASSF2 |
HGNC: | 9883 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.81e-37 | 98 |
blood island | 2.81e-37 | 98 |
hemolymphoid system | 3.30e-36 | 108 |
immune system | 1.15e-27 | 93 |
bone marrow | 5.06e-27 | 76 |
bone element | 7.28e-25 | 82 |
skeletal element | 2.40e-19 | 90 |
lateral plate mesoderm | 2.29e-17 | 203 |
adult organism | 4.21e-16 | 114 |
skeletal system | 2.86e-15 | 100 |
neural tube | 1.46e-10 | 56 |
neural rod | 1.46e-10 | 56 |
future spinal cord | 1.46e-10 | 56 |
neural keel | 1.46e-10 | 56 |
blood | 1.10e-09 | 15 |
haemolymphatic fluid | 1.10e-09 | 15 |
organism substance | 1.10e-09 | 15 |
regional part of nervous system | 1.69e-09 | 53 |
regional part of brain | 1.69e-09 | 53 |
central nervous system | 1.06e-08 | 81 |
regional part of forebrain | 5.25e-08 | 41 |
forebrain | 5.25e-08 | 41 |
anterior neural tube | 5.25e-08 | 41 |
future forebrain | 5.25e-08 | 41 |
blood vessel endothelium | 9.54e-08 | 18 |
endothelium | 9.54e-08 | 18 |
cardiovascular system endothelium | 9.54e-08 | 18 |
telencephalon | 1.28e-07 | 34 |
brain grey matter | 1.31e-07 | 34 |
gray matter | 1.31e-07 | 34 |
brain | 2.63e-07 | 68 |
future brain | 2.63e-07 | 68 |
regional part of telencephalon | 6.25e-07 | 32 |
cerebral hemisphere | 8.53e-07 | 32 |
nervous system | 8.80e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.53e-07 | 51 |
immune system cancer | 4.53e-07 | 51 |
leukemia | 5.64e-07 | 39 |