FFCP PHASE1:Hg19::chr20:4982132..4982164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9962 | |EntrezGene=9962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10973 | |HGNC=10973 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGH3,B4DJZ1 | |UniProt=Q9UGH3,B4DJZ1 | ||
|association_with_transcript=0bp_to_ENST00000338244,ENST00000424750,NM_005116,uc002wlg.1,uc002wlj.1,uc010zqr.1_5end | |association_with_transcript=0bp_to_ENST00000338244,ENST00000424750,NM_005116,uc002wlg.1,uc002wlj.1,uc010zqr.1_5end | ||
|cluster_id=chr20:4982132..4982164,- | |||
|description=CAGE_peak_1_at_SLC23A2_5end | |description=CAGE_peak_1_at_SLC23A2_5end | ||
|id=chr20:4982132..4982164,- | |id=chr20:4982132..4982164,- | ||
|ontology_enrichment_celltype=CL:0000766!5.04e-12!76;CL:0000738!7.82e-12!140;CL:0002194!3.03e-09!63;CL:0000576!3.03e-09!63;CL:0000040!3.03e-09!63;CL:0000559!3.03e-09!63;CL:0002087!3.56e-09!119;CL:0000557!3.63e-09!71;CL:0002057!1.14e-08!42;CL:0000839!1.21e-08!70;CL:0002009!3.61e-08!65;CL:0000037!8.07e-08!172;CL:0000566!8.07e-08!172;CL:0002031!1.23e-07!124;CL:0002032!5.57e-07!165;CL:0000837!5.57e-07!165;CL:0000860!7.22e-07!45;CL:0000988!7.41e-07!182 | |ontology_enrichment_celltype=CL:0000766!5.04e-12!76;CL:0000738!7.82e-12!140;CL:0002194!3.03e-09!63;CL:0000576!3.03e-09!63;CL:0000040!3.03e-09!63;CL:0000559!3.03e-09!63;CL:0002087!3.56e-09!119;CL:0000557!3.63e-09!71;CL:0002057!1.14e-08!42;CL:0000839!1.21e-08!70;CL:0002009!3.61e-08!65;CL:0000037!8.07e-08!172;CL:0000566!8.07e-08!172;CL:0002031!1.23e-07!124;CL:0002032!5.57e-07!165;CL:0000837!5.57e-07!165;CL:0000860!7.22e-07!45;CL:0000988!7.41e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.34e-11;39!CL:0000234;8.34e-11;39!CL:0000860;6.04e-10;33!CL:0002057;6.04e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.20e-14,72;CL:0000738,4.63e-13,136;CL:0000473,4.69e-11,48;CL:0000234,4.69e-11,48;CL:0002194,5.53e-11,59;CL:0000576,5.53e-11,59;CL:0000040,5.53e-11,59;CL:0000559,5.53e-11,59;CL:0000557,9.31e-11,67;CL:0002087,2.57e-10,115;CL:0000839,3.49e-10,66;CL:0002009,1.01e-09,61;CL:0000860,1.14e-08,42;CL:0002057,1.14e-08,42;CL:0000037,1.20e-08,168;CL:0002031,1.29e-08,120;CL:0002032,9.16e-08,161;CL:0000837,9.16e-08,161;CL:0000988,1.10e-07,177;CL:0000763,4.22e-07,108;CL:0000049,4.22e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.88e-08;82!CL:0002057;5.50e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.68e-24!57;UBERON:0005068!1.68e-24!57;UBERON:0006241!1.68e-24!57;UBERON:0007135!1.68e-24!57;UBERON:0001017!6.10e-23!82;UBERON:0005743!1.52e-21!86;UBERON:0000955!1.55e-21!69;UBERON:0006238!1.55e-21!69;UBERON:0002616!3.25e-20!59;UBERON:0002780!6.55e-20!41;UBERON:0001890!6.55e-20!41;UBERON:0006240!6.55e-20!41;UBERON:0000073!9.03e-20!94;UBERON:0001016!9.03e-20!94;UBERON:0003080!1.44e-19!42;UBERON:0007023!2.43e-18!115;UBERON:0001893!2.60e-16!34;UBERON:0002020!3.65e-16!34;UBERON:0003528!3.65e-16!34;UBERON:0002791!9.73e-16!33;UBERON:0001869!3.15e-15!32;UBERON:0002346!7.36e-15!90;UBERON:0003075!2.04e-14!86;UBERON:0007284!2.04e-14!86;UBERON:0002619!1.15e-13!22;UBERON:0001950!1.56e-12!20;UBERON:0000956!9.60e-12!25;UBERON:0000203!9.60e-12!25;UBERON:0003056!1.44e-10!61;UBERON:0002405!4.72e-09!115;UBERON:0002390!9.69e-08!102;UBERON:0003061!9.69e-08!102;UBERON:0000153!1.16e-07!129;UBERON:0007811!1.16e-07!129;UBERON:0000062!1.78e-07!511;UBERON:0000924!3.63e-07!173;UBERON:0006601!3.63e-07!173;UBERON:0002371!4.53e-07!80;UBERON:0000033!5.18e-07!123;UBERON:0002368!5.33e-07!35;UBERON:0001474!7.49e-07!86;UBERON:0004121!8.69e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-14;41!UBERON:0001890;1.01e-14;41!UBERON:0001893;4.56e-14;34!UBERON:0003528;5.82e-14;34!UBERON:0002020;5.82e-14;34!UBERON:0001869;6.72e-14;32!UBERON:0002791;8.10e-14;32!UBERON:0002619;1.02e-13;22!UBERON:0000073;1.31e-13;53!UBERON:0002616;1.31e-13;53!UBERON:0001950;1.42e-12;20!UBERON:0000956;6.19e-12;25!UBERON:0000203;6.19e-12;25!UBERON:0001017;7.69e-11;75!UBERON:0000955;8.12e-11;68!UBERON:0001016;1.77e-09;83 | |||
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| ||
|short_description=p1@SLC23A2 | |short_description=p1@SLC23A2 | ||
}} | }} |
Latest revision as of 22:54, 16 September 2015
Short description: | p1@SLC23A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC23A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338244, ENST00000424750, NM_005116, uc002wlg.1, uc002wlj.1, uc010zqr.1_5end |
EntrezGene: | SLC23A2 |
HGNC: | 10973 |
UniProt: | Q9UGH3B4DJZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.20e-14 | 72 |
leukocyte | 4.63e-13 | 136 |
defensive cell | 4.69e-11 | 48 |
phagocyte | 4.69e-11 | 48 |
monopoietic cell | 5.53e-11 | 59 |
monocyte | 5.53e-11 | 59 |
monoblast | 5.53e-11 | 59 |
promonocyte | 5.53e-11 | 59 |
granulocyte monocyte progenitor cell | 9.31e-11 | 67 |
nongranular leukocyte | 2.57e-10 | 115 |
myeloid lineage restricted progenitor cell | 3.49e-10 | 66 |
macrophage dendritic cell progenitor | 1.01e-09 | 61 |
classical monocyte | 1.14e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-08 | 42 |
hematopoietic stem cell | 1.20e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 1.29e-08 | 120 |
hematopoietic oligopotent progenitor cell | 9.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.16e-08 | 161 |
hematopoietic cell | 1.10e-07 | 177 |
myeloid cell | 4.22e-07 | 108 |
common myeloid progenitor | 4.22e-07 | 108 |