FFCP PHASE1:Hg19::chr2:133429062..133429090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116372 | |EntrezGene=116372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28431 | |HGNC=28431 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2G4 | |UniProt=Q8N2G4 | ||
|association_with_transcript=0bp_to_NM_001077427,uc002tto.2_5end | |association_with_transcript=0bp_to_NM_001077427,uc002tto.2_5end | ||
|cluster_id=chr2:133429062..133429090,- | |||
|description=CAGE_peak_2_at_LYPD1_5end | |description=CAGE_peak_2_at_LYPD1_5end | ||
|id=chr2:133429062..133429090,- | |id=chr2:133429062..133429090,- | ||
|ontology_enrichment_celltype=CL:0000359!5.91e-17!32;CL:0000220!1.01e-13!246;CL:0002321!2.00e-13!248;CL:0000192!4.15e-12!42;CL:0000514!4.15e-12!42;CL:0000222!2.54e-11!119;CL:0000055!4.43e-11!180;CL:0002319!8.71e-10!25;CL:0000393!1.30e-09!60;CL:0000211!1.30e-09!60;CL:0000183!4.22e-09!59;CL:0000187!1.66e-08!54;CL:0000243!1.74e-08!15;CL:0000125!1.74e-08!15;CL:0000030!1.74e-08!15;CL:0000339!1.74e-08!15;CL:0002595!4.02e-08!5;CL:0000680!1.09e-07!57;CL:0000056!1.09e-07!57;CL:0000355!1.09e-07!57;CL:0000133!1.89e-07!59;CL:0000095!2.96e-07!17;CL:0000123!2.96e-07!17;CL:0002594!6.21e-07!4;CL:0000128!7.06e-07!7;CL:0000126!7.06e-07!7;CL:0000127!7.06e-07!7;CL:0002453!7.06e-07!7 | |ontology_enrichment_celltype=CL:0000359!5.91e-17!32;CL:0000220!1.01e-13!246;CL:0002321!2.00e-13!248;CL:0000192!4.15e-12!42;CL:0000514!4.15e-12!42;CL:0000222!2.54e-11!119;CL:0000055!4.43e-11!180;CL:0002319!8.71e-10!25;CL:0000393!1.30e-09!60;CL:0000211!1.30e-09!60;CL:0000183!4.22e-09!59;CL:0000187!1.66e-08!54;CL:0000243!1.74e-08!15;CL:0000125!1.74e-08!15;CL:0000030!1.74e-08!15;CL:0000339!1.74e-08!15;CL:0002595!4.02e-08!5;CL:0000680!1.09e-07!57;CL:0000056!1.09e-07!57;CL:0000355!1.09e-07!57;CL:0000133!1.89e-07!59;CL:0000095!2.96e-07!17;CL:0000123!2.96e-07!17;CL:0002594!6.21e-07!4;CL:0000128!7.06e-07!7;CL:0000126!7.06e-07!7;CL:0000127!7.06e-07!7;CL:0002453!7.06e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.42e-44;32!CL:0000192;1.40e-25;43!CL:0002595;6.63e-23;5!CL:0002594;6.30e-19;4!CL:0000187;1.28e-12;55!CL:0000393;5.55e-11;61!CL:0000211;5.55e-11;61!CL:0002539;5.95e-11;10!CL:0002593;1.50e-10;2!CL:0000650;1.97e-10;2!CL:1000500;1.97e-10;2!CL:1000618;1.97e-10;2!CL:1001318;1.97e-10;2!CL:0002173;1.97e-10;2!CL:0002589;1.02e-09;2!CL:1000507;2.10e-07;10!CL:1000494;2.10e-07;10!CL:0002592;5.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.23e-46,32;CL:0000192,4.00e-33,43;CL:0000514,4.00e-33,43;CL:0000187,6.78e-25,55;CL:0000393,1.29e-24,61;CL:0000211,1.29e-24,61;CL:0000680,2.27e-23,58;CL:0000056,2.27e-23,58;CL:0000355,2.27e-23,58;CL:0002595,9.34e-23,5;CL:0002594,6.33e-19,4;CL:0000222,1.22e-12,121;CL:0002539,6.84e-11,10;CL:0000650,1.68e-10,2;CL:1000500,1.68e-10,2;CL:1000618,1.68e-10,2;CL:1001318,1.68e-10,2;CL:0002173,1.68e-10,2;CL:0002593,1.68e-10,2;CL:0002589,9.39e-10,2;CL:0002321,3.63e-08,250;CL:1000507,1.85e-07,10;CL:1000494,1.85e-07,10;CL:0002592,5.18e-07,3;CL:0002605,9.60e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.40e-25;43!CL:0000355;7.74e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!7.05e-27!42;UBERON:0003509!7.05e-27!42;UBERON:0004572!7.05e-27!42;UBERON:0000025!1.82e-21!194;UBERON:0001981!1.13e-20!60;UBERON:0007500!1.13e-20!60;UBERON:0004537!1.13e-20!60;UBERON:0006965!1.13e-20!60;UBERON:0002049!4.09e-20!79;UBERON:0007798!4.09e-20!79;UBERON:0000055!1.21e-19!69;UBERON:0003914!4.09e-18!118;UBERON:0004111!1.14e-17!241;UBERON:0004573!2.95e-17!33;UBERON:0004571!2.95e-17!33;UBERON:0000477!5.56e-17!286;UBERON:0004872!4.67e-16!84;UBERON:0004535!1.36e-14!110;UBERON:0000119!3.43e-14!312;UBERON:0000483!4.07e-14!309;UBERON:0001009!8.22e-14!113;UBERON:0000481!1.23e-09!347;UBERON:0000490!8.53e-09!138;UBERON:0000947!2.31e-08!21;UBERON:0010191!2.31e-08!21;UBERON:0003834!4.02e-08!5;UBERON:0001533!4.02e-08!5;UBERON:0007625!5.20e-08!11;UBERON:0003498!1.58e-07!5;UBERON:0005985!1.58e-07!5;UBERON:0003075!2.89e-07!86;UBERON:0007284!2.89e-07!86;UBERON:0000073!3.10e-07!94;UBERON:0001016!3.10e-07!94;UBERON:0000475!3.50e-07!365;UBERON:0005743!4.73e-07!86;UBERON:0001310!6.21e-07!4;UBERON:0001134!9.66e-07!61;UBERON:0002036!9.66e-07!61;UBERON:0003082!9.66e-07!61 | |ontology_enrichment_uberon=UBERON:0001637!7.05e-27!42;UBERON:0003509!7.05e-27!42;UBERON:0004572!7.05e-27!42;UBERON:0000025!1.82e-21!194;UBERON:0001981!1.13e-20!60;UBERON:0007500!1.13e-20!60;UBERON:0004537!1.13e-20!60;UBERON:0006965!1.13e-20!60;UBERON:0002049!4.09e-20!79;UBERON:0007798!4.09e-20!79;UBERON:0000055!1.21e-19!69;UBERON:0003914!4.09e-18!118;UBERON:0004111!1.14e-17!241;UBERON:0004573!2.95e-17!33;UBERON:0004571!2.95e-17!33;UBERON:0000477!5.56e-17!286;UBERON:0004872!4.67e-16!84;UBERON:0004535!1.36e-14!110;UBERON:0000119!3.43e-14!312;UBERON:0000483!4.07e-14!309;UBERON:0001009!8.22e-14!113;UBERON:0000481!1.23e-09!347;UBERON:0000490!8.53e-09!138;UBERON:0000947!2.31e-08!21;UBERON:0010191!2.31e-08!21;UBERON:0003834!4.02e-08!5;UBERON:0001533!4.02e-08!5;UBERON:0007625!5.20e-08!11;UBERON:0003498!1.58e-07!5;UBERON:0005985!1.58e-07!5;UBERON:0003075!2.89e-07!86;UBERON:0007284!2.89e-07!86;UBERON:0000073!3.10e-07!94;UBERON:0001016!3.10e-07!94;UBERON:0000475!3.50e-07!365;UBERON:0005743!4.73e-07!86;UBERON:0001310!6.21e-07!4;UBERON:0001134!9.66e-07!61;UBERON:0002036!9.66e-07!61;UBERON:0003082!9.66e-07!61 | ||
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|short_description=p2@LYPD1 | |short_description=p2@LYPD1 | ||
}} | }} |
Latest revision as of 00:37, 17 September 2015
Short description: | p2@LYPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LYPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001077427, uc002tto.2_5end |
EntrezGene: | LYPD1 |
HGNC: | 28431 |
UniProt: | Q8N2G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.23e-46 | 32 |
smooth muscle cell | 4.00e-33 | 43 |
smooth muscle myoblast | 4.00e-33 | 43 |
muscle cell | 6.78e-25 | 55 |
electrically responsive cell | 1.29e-24 | 61 |
electrically active cell | 1.29e-24 | 61 |
muscle precursor cell | 2.27e-23 | 58 |
myoblast | 2.27e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-23 | 58 |
smooth muscle cell of the subclavian artery | 9.34e-23 | 5 |
smooth muscle cell of the umbilical artery | 6.33e-19 | 4 |
mesodermal cell | 1.22e-12 | 121 |
aortic smooth muscle cell | 6.84e-11 | 10 |
mesangial cell | 1.68e-10 | 2 |
kidney interstitial cell | 1.68e-10 | 2 |
juxtaglomerular complex cell | 1.68e-10 | 2 |
renal interstitial pericyte | 1.68e-10 | 2 |
extraglomerular mesangial cell | 1.68e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.68e-10 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 9.39e-10 | 2 |
embryonic cell | 3.63e-08 | 250 |
kidney tubule cell | 1.85e-07 | 10 |
nephron tubule epithelial cell | 1.85e-07 | 10 |
smooth muscle cell of the coronary artery | 5.18e-07 | 3 |
astrocyte of the cerebral cortex | 9.60e-07 | 3 |