FFCP PHASE1:Hg19::chr19:291348..291363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8612 | |EntrezGene=8612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9230 | |HGNC=9230 | ||
|TSSclassifier=strong | |||
|UniProt=O43688,E9PAY8 | |UniProt=O43688,E9PAY8 | ||
|association_with_transcript=71bp_to_ENST00000269812,ENST00000434325,NM_003712,NM_177526,uc002loi.2,uc002loj.2_5end | |association_with_transcript=71bp_to_ENST00000269812,ENST00000434325,NM_003712,NM_177526,uc002loi.2,uc002loj.2_5end | ||
|cluster_id=chr19:291348..291363,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_PPAP2C_5end | |description=CAGE_peak_2_at_PPAP2C_5end | ||
|id=chr19:291348..291363,- | |id=chr19:291348..291363,- | ||
|ontology_enrichment_celltype=CL:0000066!1.06e-26!254;CL:0002076!1.79e-08!43;CL:0000082!3.37e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.06e-26!254;CL:0002076!1.79e-08!43;CL:0000082!3.37e-07!19 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.29e-12,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.03e-09;82 | |||
|ontology_enrichment_disease=DOID:305!1.15e-19!106;DOID:0050687!1.61e-13!143;DOID:299!1.75e-10!25 | |ontology_enrichment_disease=DOID:305!1.15e-19!106;DOID:0050687!1.61e-13!143;DOID:299!1.75e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.69e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.07e-16,106;DOID:0050687,1.11e-12,143;DOID:299,1.95e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0000064!5.49e-22!219;UBERON:0001049!5.76e-20!57;UBERON:0005068!5.76e-20!57;UBERON:0006241!5.76e-20!57;UBERON:0007135!5.76e-20!57;UBERON:0003075!1.11e-18!86;UBERON:0007284!1.11e-18!86;UBERON:0000033!1.76e-18!123;UBERON:0000153!2.04e-18!129;UBERON:0007811!2.04e-18!129;UBERON:0005743!2.31e-18!86;UBERON:0000073!2.58e-17!94;UBERON:0001016!2.58e-17!94;UBERON:0002346!1.18e-16!90;UBERON:0001017!2.25e-16!82;UBERON:0004121!1.36e-15!169;UBERON:0000955!1.72e-15!69;UBERON:0006238!1.72e-15!69;UBERON:0002616!3.09e-15!59;UBERON:0000477!4.10e-15!286;UBERON:0000924!2.12e-14!173;UBERON:0006601!2.12e-14!173;UBERON:0003056!2.23e-14!61;UBERON:0004111!4.25e-14!241;UBERON:0000481!7.54e-14!347;UBERON:0003080!1.13e-13!42;UBERON:0002780!2.10e-13!41;UBERON:0001890!2.10e-13!41;UBERON:0006240!2.10e-13!41;UBERON:0002020!2.86e-13!34;UBERON:0003528!2.86e-13!34;UBERON:0001893!3.09e-13!34;UBERON:0000922!3.42e-13!612;UBERON:0007023!6.92e-13!115;UBERON:0000063!1.24e-12!97;UBERON:0002791!1.29e-12!33;UBERON:0000025!3.22e-12!194;UBERON:0000468!5.71e-12!659;UBERON:0001869!8.59e-12!32;UBERON:0008947!5.57e-11!38;UBERON:0003258!5.57e-11!38;UBERON:0002050!7.09e-11!605;UBERON:0005423!7.09e-11!605;UBERON:0000483!7.52e-11!309;UBERON:0000119!9.39e-11!312;UBERON:0000923!1.25e-10!604;UBERON:0005291!1.25e-10!604;UBERON:0006598!1.25e-10!604;UBERON:0002532!1.25e-10!604;UBERON:0000062!1.76e-10!511;UBERON:0000072!2.65e-10!46;UBERON:0000475!3.30e-10!365;UBERON:0000065!9.56e-10!53;UBERON:0001004!9.83e-10!72;UBERON:0000464!2.47e-09!104;UBERON:0004119!3.41e-09!169;UBERON:0000925!3.41e-09!169;UBERON:0006595!3.41e-09!169;UBERON:0000480!5.55e-09!626;UBERON:0000467!6.83e-09!625;UBERON:0000956!7.75e-08!25;UBERON:0000203!7.75e-08!25;UBERON:0001007!9.70e-08!155;UBERON:0001555!9.70e-08!155;UBERON:0007026!9.70e-08!155;UBERON:0002619!9.76e-08!22;UBERON:0003076!1.09e-07!15;UBERON:0003057!1.09e-07!15;UBERON:0002308!1.17e-07!9;UBERON:0000125!1.17e-07!9;UBERON:0000077!1.21e-07!130;UBERON:0001041!1.51e-07!98;UBERON:0004802!3.37e-07!19;UBERON:0000115!3.37e-07!19;UBERON:0002298!3.78e-07!8;UBERON:0000466!7.04e-07!126;UBERON:0005178!7.12e-07!34;UBERON:0002224!7.12e-07!34;UBERON:0001048!8.15e-07!168 | |ontology_enrichment_uberon=UBERON:0000064!5.49e-22!219;UBERON:0001049!5.76e-20!57;UBERON:0005068!5.76e-20!57;UBERON:0006241!5.76e-20!57;UBERON:0007135!5.76e-20!57;UBERON:0003075!1.11e-18!86;UBERON:0007284!1.11e-18!86;UBERON:0000033!1.76e-18!123;UBERON:0000153!2.04e-18!129;UBERON:0007811!2.04e-18!129;UBERON:0005743!2.31e-18!86;UBERON:0000073!2.58e-17!94;UBERON:0001016!2.58e-17!94;UBERON:0002346!1.18e-16!90;UBERON:0001017!2.25e-16!82;UBERON:0004121!1.36e-15!169;UBERON:0000955!1.72e-15!69;UBERON:0006238!1.72e-15!69;UBERON:0002616!3.09e-15!59;UBERON:0000477!4.10e-15!286;UBERON:0000924!2.12e-14!173;UBERON:0006601!2.12e-14!173;UBERON:0003056!2.23e-14!61;UBERON:0004111!4.25e-14!241;UBERON:0000481!7.54e-14!347;UBERON:0003080!1.13e-13!42;UBERON:0002780!2.10e-13!41;UBERON:0001890!2.10e-13!41;UBERON:0006240!2.10e-13!41;UBERON:0002020!2.86e-13!34;UBERON:0003528!2.86e-13!34;UBERON:0001893!3.09e-13!34;UBERON:0000922!3.42e-13!612;UBERON:0007023!6.92e-13!115;UBERON:0000063!1.24e-12!97;UBERON:0002791!1.29e-12!33;UBERON:0000025!3.22e-12!194;UBERON:0000468!5.71e-12!659;UBERON:0001869!8.59e-12!32;UBERON:0008947!5.57e-11!38;UBERON:0003258!5.57e-11!38;UBERON:0002050!7.09e-11!605;UBERON:0005423!7.09e-11!605;UBERON:0000483!7.52e-11!309;UBERON:0000119!9.39e-11!312;UBERON:0000923!1.25e-10!604;UBERON:0005291!1.25e-10!604;UBERON:0006598!1.25e-10!604;UBERON:0002532!1.25e-10!604;UBERON:0000062!1.76e-10!511;UBERON:0000072!2.65e-10!46;UBERON:0000475!3.30e-10!365;UBERON:0000065!9.56e-10!53;UBERON:0001004!9.83e-10!72;UBERON:0000464!2.47e-09!104;UBERON:0004119!3.41e-09!169;UBERON:0000925!3.41e-09!169;UBERON:0006595!3.41e-09!169;UBERON:0000480!5.55e-09!626;UBERON:0000467!6.83e-09!625;UBERON:0000956!7.75e-08!25;UBERON:0000203!7.75e-08!25;UBERON:0001007!9.70e-08!155;UBERON:0001555!9.70e-08!155;UBERON:0007026!9.70e-08!155;UBERON:0002619!9.76e-08!22;UBERON:0003076!1.09e-07!15;UBERON:0003057!1.09e-07!15;UBERON:0002308!1.17e-07!9;UBERON:0000125!1.17e-07!9;UBERON:0000077!1.21e-07!130;UBERON:0001041!1.51e-07!98;UBERON:0004802!3.37e-07!19;UBERON:0000115!3.37e-07!19;UBERON:0002298!3.78e-07!8;UBERON:0000466!7.04e-07!126;UBERON:0005178!7.12e-07!34;UBERON:0002224!7.12e-07!34;UBERON:0001048!8.15e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.27e-16;34!UBERON:0002780;2.45e-15;41!UBERON:0001890;2.45e-15;41!UBERON:0003528;3.86e-15;34!UBERON:0002020;3.86e-15;34!UBERON:0000073;1.16e-14;53!UBERON:0002616;1.16e-14;53!UBERON:0002791;1.72e-14;32!UBERON:0001869;2.32e-14;32!UBERON:0002619;9.44e-13;22!UBERON:0000125;5.54e-11;9!UBERON:0002308;5.54e-11;9!UBERON:0000956;9.60e-11;25!UBERON:0000203;9.60e-11;25!UBERON:0001950;1.07e-10;20!UBERON:0002298;2.41e-10;6!UBERON:0001017;3.96e-09;75!UBERON:0000955;6.53e-09;68!UBERON:0001016;2.96e-08;83!UBERON:0009663;4.05e-08;7!UBERON:0002420;7.27e-08;9!UBERON:0007245;7.27e-08;9!UBERON:0010009;7.27e-08;9!UBERON:0010011;7.27e-08;9!UBERON:0000454;7.27e-08;9!UBERON:0004732;6.68e-07;13 | |||
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| ||
|short_description=p2@PPAP2C | |short_description=p2@PPAP2C | ||
}} | }} |
Latest revision as of 03:13, 17 September 2015
Short description: | p2@PPAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPAP2C_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 71bp_to_ENST00000269812, ENST00000434325, NM_003712, NM_177526, uc002loi.2, uc002loj.2_5end |
EntrezGene: | PPAP2C |
HGNC: | 9230 |
UniProt: | O43688E9PAY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.29e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.07e-16 | 106 |
cell type cancer | 1.11e-12 | 143 |
adenocarcinoma | 1.95e-10 | 25 |