FFCP PHASE1:Hg19::chr19:3366570..3366619,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:3366570..3366619,+ to FFCP PHASE1:Hg19::chr19:3366570..3366619,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4782 | |EntrezGene=4782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7786 | |HGNC=7786 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9H9 | |UniProt=F8W9H9 | ||
|association_with_transcript=0bp_to_ENST00000341919,ENST00000343825,uc002lxp.2,uc010xhi.1,uc010xhj.1_5end | |||
|cluster_id=chr19:3366570..3366619,+ | |||
|description=CAGE_peak_1_at_NFIC_5end | |||
|id=chr19:3366570..3366619,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.43e-26!180;CL:0000057!1.03e-17!75;CL:0000222!2.88e-17!119;CL:0000183!1.13e-12!59;CL:0000680!3.52e-12!57;CL:0000056!3.52e-12!57;CL:0000355!3.52e-12!57;CL:0000187!4.90e-12!54;CL:0000192!6.38e-10!42;CL:0000514!6.38e-10!42;CL:0000220!2.53e-09!246;CL:0002321!1.04e-08!248;CL:0000393!1.40e-08!60;CL:0000211!1.40e-08!60;CL:0000359!3.00e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.67e-08;43!CL:0000057;5.26e-08;73!CL:0000187;3.89e-07;55!CL:0000359;5.14e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-17,76;CL:0000222,1.82e-17,121;CL:0000680,1.35e-12,58;CL:0000056,1.35e-12,58;CL:0000355,1.35e-12,58;CL:0000187,1.87e-12,55;CL:0000192,2.46e-10,43;CL:0000514,2.46e-10,43;CL:0000393,5.45e-09,61;CL:0000211,5.45e-09,61;CL:0002321,7.06e-09,250;CL:0000359,2.97e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.67e-08;43!CL:0000355;2.48e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.97e-19!143;UBERON:0000475!1.46e-18!365;UBERON:0000914!5.31e-17!83;UBERON:0002329!5.31e-17!83;UBERON:0003077!5.31e-17!83;UBERON:0003059!5.31e-17!83;UBERON:0007282!5.31e-17!83;UBERON:0009618!5.31e-17!83;UBERON:0007285!5.31e-17!83;UBERON:0002100!8.61e-16!216;UBERON:0004290!1.29e-15!70;UBERON:0003914!2.53e-15!118;UBERON:0003102!3.15e-15!95;UBERON:0003104!3.42e-15!238;UBERON:0009142!3.42e-15!238;UBERON:0000481!2.30e-14!347;UBERON:0002385!7.36e-14!63;UBERON:0001015!7.36e-14!63;UBERON:0000383!7.36e-14!63;UBERON:0001134!1.22e-13!61;UBERON:0002036!1.22e-13!61;UBERON:0003082!1.22e-13!61;UBERON:0000486!1.63e-13!82;UBERON:0000468!1.89e-13!659;UBERON:0000477!2.19e-13!286;UBERON:0000483!9.09e-13!309;UBERON:0000467!1.31e-12!625;UBERON:0000119!2.04e-12!312;UBERON:0000480!2.31e-12!626;UBERON:0004872!2.61e-12!84;UBERON:0000490!3.12e-12!138;UBERON:0001981!3.95e-12!60;UBERON:0007500!3.95e-12!60;UBERON:0004537!3.95e-12!60;UBERON:0006965!3.95e-12!60;UBERON:0004111!4.77e-12!241;UBERON:0000926!1.42e-11!448;UBERON:0004120!1.42e-11!448;UBERON:0006603!1.42e-11!448;UBERON:0001637!3.61e-11!42;UBERON:0003509!3.61e-11!42;UBERON:0004572!3.61e-11!42;UBERON:0000055!1.10e-10!69;UBERON:0000923!5.10e-10!604;UBERON:0005291!5.10e-10!604;UBERON:0006598!5.10e-10!604;UBERON:0002532!5.10e-10!604;UBERON:0002050!5.22e-10!605;UBERON:0005423!5.22e-10!605;UBERON:0002049!6.78e-10!79;UBERON:0007798!6.78e-10!79;UBERON:0001009!6.75e-09!113;UBERON:0000922!1.15e-08!612;UBERON:0000479!1.27e-08!787;UBERON:0004573!1.78e-08!33;UBERON:0004571!1.78e-08!33;UBERON:0003103!6.11e-08!69;UBERON:0004535!6.91e-08!110;UBERON:0000025!1.39e-07!194;UBERON:0007100!2.46e-07!27;UBERON:0000078!6.29e-07!18;UBERON:0002199!9.76e-07!45;UBERON:0002416!9.76e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.07e-08;42!UBERON:0003509;2.07e-08;42!UBERON:0004572;2.07e-08;42!UBERON:0004573;7.65e-08;33!UBERON:0004571;7.65e-08;33!UBERON:0007100;4.15e-07;25 | |||
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| ||
|short_description=p1@NFIC | |||
}} | }} |
Latest revision as of 06:33, 17 September 2015
Short description: | p1@NFIC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFIC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341919, ENST00000343825, uc002lxp.2, uc010xhi.1, uc010xhj.1_5end |
EntrezGene: | NFIC |
HGNC: | 7786 |
UniProt: | F8W9H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.10e-17 | 76 |
mesodermal cell | 1.82e-17 | 121 |
muscle precursor cell | 1.35e-12 | 58 |
myoblast | 1.35e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-12 | 58 |
muscle cell | 1.87e-12 | 55 |
smooth muscle cell | 2.46e-10 | 43 |
smooth muscle myoblast | 2.46e-10 | 43 |
electrically responsive cell | 5.45e-09 | 61 |
electrically active cell | 5.45e-09 | 61 |
embryonic cell | 7.06e-09 | 250 |
vascular associated smooth muscle cell | 2.97e-07 | 32 |