FFCP PHASE1:Hg19::chr16:6533849..6533868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54715 | |EntrezGene=54715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |HGNC=18222 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZY7,Q8TCM0 | |UniProt=F8VZY7,Q8TCM0 | ||
|association_with_transcript=55bp_to_ENST00000551752,uc002cyv.1_5end | |association_with_transcript=55bp_to_ENST00000551752,uc002cyv.1_5end | ||
|cluster_id=chr16:6533849..6533868,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_17_at_RBFOX1_5end | |description=CAGE_peak_17_at_RBFOX1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!6.32e-08!2;CL:0000047!7.77e-07!8 | |ontology_enrichment_celltype=CL:0000242!6.32e-08!2;CL:0000047!7.77e-07!8 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.04e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.29e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;7.29e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p17@RBFOX1 | |short_description=p17@RBFOX1 | ||
}} | }} |
Latest revision as of 07:58, 17 September 2015
Short description: | p17@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RBFOX1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 55bp_to_ENST00000551752, uc002cyv.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | F8VZY7Q8TCM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.04e-07 | 8 |