FFCP PHASE1:Hg19::chr15:40532809..40532831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56924 | |EntrezGene=56924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |HGNC=16061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000560806_5end | |association_with_transcript=-14bp_to_ENST00000560806_5end | ||
|cluster_id=chr15:40532809..40532831,+ | |||
|description=CAGE_peak_4_at_PAK6_5end | |description=CAGE_peak_4_at_PAK6_5end | ||
|id=chr15:40532809..40532831,+ | |id=chr15:40532809..40532831,+ | ||
|ontology_enrichment_celltype=CL:0002076!8.72e-18!43;CL:0000223!2.22e-13!59;CL:0002159!3.17e-12!13;CL:0002251!3.70e-10!21;CL:0002368!5.47e-10!13;CL:0000622!1.24e-09!5;CL:0000066!6.06e-08!254;CL:0000154!6.40e-08!6 | |ontology_enrichment_celltype=CL:0002076!8.72e-18!43;CL:0000223!2.22e-13!59;CL:0002159!3.17e-12!13;CL:0002251!3.70e-10!21;CL:0002368!5.47e-10!13;CL:0000622!1.24e-09!5;CL:0000066!6.06e-08!254;CL:0000154!6.40e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.81e-15;42!CL:0002368;2.07e-14;13!CL:0002159;1.25e-13;14!CL:0002251;4.50e-12;20!CL:0000622;2.70e-11;5!CL:0002623;5.95e-11;3!CL:0002166;2.04e-10;3!CL:0002328;1.26e-09;3!CL:0000154;2.07e-09;6!CL:0002202;2.60e-08;9!CL:0002632;2.60e-08;9!CL:0002327;8.38e-08;4!CL:0000575;3.08e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.28e-20,42;CL:0000223,2.36e-15,58;CL:0002368,1.79e-14,13;CL:0002159,1.25e-13,14;CL:0002251,5.12e-12,20;CL:0000622,2.47e-11,5;CL:0002623,5.87e-11,3;CL:0002166,1.18e-10,3;CL:0002328,7.82e-10,3;CL:0000154,1.93e-09,6;CL:0002202,1.99e-08,9;CL:0002632,1.99e-08,9;CL:0002327,9.12e-08,4;CL:0000575,3.98e-07,2;CL:0000066,5.44e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000223;2.21e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!1.46e-08!14 | |ontology_enrichment_disease=DOID:1749!1.46e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.18e-26!34;UBERON:0001869!4.79e-26!32;UBERON:0002791!1.15e-24!33;UBERON:0002020!9.41e-24!34;UBERON:0003528!9.41e-24!34;UBERON:0001950!2.87e-23!20;UBERON:0002619!5.48e-23!22;UBERON:0000153!6.64e-23!129;UBERON:0007811!6.64e-23!129;UBERON:0000956!6.89e-22!25;UBERON:0000203!6.89e-22!25;UBERON:0000033!1.46e-21!123;UBERON:0002780!2.12e-20!41;UBERON:0001890!2.12e-20!41;UBERON:0006240!2.12e-20!41;UBERON:0003080!9.68e-20!42;UBERON:0007023!2.20e-19!115;UBERON:0001049!1.63e-17!57;UBERON:0005068!1.63e-17!57;UBERON:0006241!1.63e-17!57;UBERON:0007135!1.63e-17!57;UBERON:0004121!2.05e-17!169;UBERON:0000924!1.19e-16!173;UBERON:0006601!1.19e-16!173;UBERON:0002616!2.17e-15!59;UBERON:0000955!2.86e-15!69;UBERON:0006238!2.86e-15!69;UBERON:0001017!1.38e-14!82;UBERON:0003056!8.55e-14!61;UBERON:0005743!1.77e-13!86;UBERON:0000161!1.03e-12!35;UBERON:0000200!8.83e-12!6;UBERON:0003075!9.10e-12!86;UBERON:0007284!9.10e-12!86;UBERON:0000073!2.42e-11!94;UBERON:0001016!2.42e-11!94;UBERON:0002346!7.34e-11!90;UBERON:0001004!8.79e-11!72;UBERON:0000064!4.25e-10!219;UBERON:0000166!8.99e-10!21;UBERON:0000475!9.34e-10!365;UBERON:0004119!8.76e-09!169;UBERON:0000925!8.76e-09!169;UBERON:0006595!8.76e-09!169;UBERON:0001871!2.86e-08!7;UBERON:0000165!8.69e-08!28;UBERON:0000930!8.69e-08!28;UBERON:0000062!1.77e-07!511;UBERON:0000922!3.46e-07!612;UBERON:0002021!8.05e-07!5;UBERON:0000923!8.33e-07!604;UBERON:0005291!8.33e-07!604;UBERON:0006598!8.33e-07!604;UBERON:0002532!8.33e-07!604;UBERON:0002050!9.41e-07!605;UBERON:0005423!9.41e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.53e-42;20!UBERON:0002619;3.01e-38;22!UBERON:0000956;2.61e-33;25!UBERON:0000203;2.61e-33;25!UBERON:0001869;1.87e-28;32!UBERON:0001893;3.64e-27;34!UBERON:0002791;5.39e-25;32!UBERON:0003528;1.93e-23;34!UBERON:0002020;1.93e-23;34!UBERON:0000200;3.56e-20;6!UBERON:0002780;5.44e-16;41!UBERON:0001890;5.44e-16;41!UBERON:0002021;1.43e-11;5!UBERON:0001871;1.74e-11;6!UBERON:0001870;3.31e-11;3!UBERON:0001872;7.18e-11;5!UBERON:0011159;1.12e-10;5!UBERON:0000073;5.21e-10;53!UBERON:0002616;5.21e-10;53!UBERON:0004815;1.26e-09;3!UBERON:0002031;1.26e-09;3!UBERON:0002702;4.99e-08;2!UBERON:0001017;5.50e-08;75!UBERON:0001708;6.52e-08;4!UBERON:0008895;6.52e-08;4!UBERON:0001911;8.38e-08;4!UBERON:0000161;8.94e-08;19!UBERON:0000166;8.94e-08;19!UBERON:0002771;9.01e-08;2!UBERON:0001876;5.80e-07;2!UBERON:0000955;7.39e-07;68!UBERON:0007196;9.34e-07;15!UBERON:0001558;9.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.06e-42,20;UBERON:0002619,1.37e-38,22;UBERON:0000956,1.30e-33,25;UBERON:0000203,1.30e-33,25;UBERON:0001869,5.92e-32,32;UBERON:0001893,7.78e-30,34;UBERON:0002791,1.57e-28,32;UBERON:0003528,1.26e-26,34;UBERON:0002020,1.26e-26,34;UBERON:0002780,5.13e-24,41;UBERON:0001890,5.13e-24,41;UBERON:0003080,5.13e-24,41;UBERON:0006240,5.13e-24,41;UBERON:0000200,3.25e-20,6;UBERON:0010371,8.06e-19,104;UBERON:0003056,3.14e-18,61;UBERON:0000073,1.43e-17,53;UBERON:0002616,1.43e-17,53;UBERON:0004121,7.49e-17,171;UBERON:0000924,7.49e-17,171;UBERON:0006601,7.49e-17,171;UBERON:0001049,2.17e-16,56;UBERON:0005068,2.17e-16,56;UBERON:0006241,2.17e-16,56;UBERON:0007135,2.17e-16,56;UBERON:0000955,8.88e-16,68;UBERON:0006238,8.88e-16,68;UBERON:0001017,6.15e-14,81;UBERON:0011216,2.39e-13,223;UBERON:0003075,2.88e-12,82;UBERON:0007284,2.88e-12,82;UBERON:0001016,4.95e-12,89;UBERON:0001871,1.41e-11,6;UBERON:0002021,1.58e-11,5;UBERON:0002346,1.83e-11,86;UBERON:0001870,2.36e-11,3;UBERON:0001872,5.56e-11,5;UBERON:0011159,8.41e-11,5;UBERON:0007023,1.85e-10,114;UBERON:0010314,3.58e-10,132;UBERON:0004815,7.82e-10,3;UBERON:0002031,7.82e-10,3;UBERON:0002702,4.07e-08,2;UBERON:0001708,4.34e-08,4;UBERON:0008895,4.34e-08,4;UBERON:0001911,9.12e-08,4;UBERON:0005333,9.12e-08,4;UBERON:0008425,9.12e-08,4;UBERON:0005311,9.12e-08,4;UBERON:0002771,9.19e-08,2;UBERON:0001004,2.13e-07,74;UBERON:0000033,5.11e-07,56;UBERON:0001876,5.29e-07,2;UBERON:0002050,6.82e-07,564;UBERON:0007196,8.26e-07,15;UBERON:0001558,8.26e-07,15 | |||
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| ||
|short_description=p4@PAK6 | |short_description=p4@PAK6 | ||
}} | }} |
Latest revision as of 12:50, 17 September 2015
Short description: | p4@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000560806_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.28e-20 | 42 |
endodermal cell | 2.36e-15 | 58 |
respiratory epithelial cell | 1.79e-14 | 13 |
general ecto-epithelial cell | 1.25e-13 | 14 |
epithelial cell of alimentary canal | 5.12e-12 | 20 |
acinar cell | 2.47e-11 | 5 |
acinar cell of salivary gland | 5.87e-11 | 3 |
epithelial cell of Malassez | 1.18e-10 | 3 |
bronchial epithelial cell | 7.82e-10 | 3 |
protein secreting cell | 1.93e-09 | 6 |
epithelial cell of tracheobronchial tree | 1.99e-08 | 9 |
epithelial cell of lower respiratory tract | 1.99e-08 | 9 |
mammary gland epithelial cell | 9.12e-08 | 4 |
corneal epithelial cell | 3.98e-07 | 2 |
epithelial cell | 5.44e-07 | 253 |