FFCP PHASE1:Hg19::chr11:31825194..31825209,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:31825194..31825209,- to FFCP PHASE1:Hg19::chr11:31825194..31825209,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000530714_5end | |||
|cluster_id=chr11:31825194..31825209,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_17_at_PAX6_5end | |||
|id=chr11:31825194..31825209,- | |||
|ontology_enrichment_celltype=CL:0000128!3.97e-11!7;CL:0000126!3.97e-11!7;CL:0000127!3.97e-11!7;CL:0002453!3.97e-11!7;CL:0000064!1.04e-10!3;CL:0005012!1.04e-10!3;CL:0000067!1.04e-10!3;CL:0002304!1.04e-10!3;CL:0002605!1.42e-10!3;CL:0000243!7.98e-08!15;CL:0000125!7.98e-08!15;CL:0000030!7.98e-08!15;CL:0000339!7.98e-08!15;CL:0002319!1.81e-07!25;CL:0000095!6.83e-07!17;CL:0000123!6.83e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000064;9.52e-20;3!CL:0000067;9.52e-20;3!CL:0005012;9.52e-20;3!CL:0002304;9.52e-20;3!CL:0000047;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.50e-20,3;CL:0000067,6.50e-20,3;CL:0005012,6.50e-20,3;CL:0002304,6.50e-20,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.17e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;4.54e-29;2!UBERON:0002757;4.54e-29;2!UBERON:0010134;4.54e-29;2!UBERON:0005408;4.54e-29;2!UBERON:0001899;4.54e-29;2!UBERON:0002037;2.12e-22;6!UBERON:0007625;9.01e-21;11!UBERON:0001778;9.52e-20;3!UBERON:0001775;9.52e-20;3!UBERON:0004733;1.63e-19;12!UBERON:0002028;1.63e-19;12!UBERON:0004732;4.83e-18;13!UBERON:0002680;3.68e-15;9!UBERON:0001895;3.68e-15;9!UBERON:0003296;4.54e-15;4!UBERON:0010133;4.54e-15;4!UBERON:0000488;4.54e-15;4!UBERON:0002784;4.54e-15;4!UBERON:0000019;3.59e-12;19!UBERON:0000047;3.59e-12;19!UBERON:0004088;3.59e-12;19!UBERON:0010230;3.59e-12;19!UBERON:0000970;1.41e-11;20!UBERON:0002104;4.87e-11;21!UBERON:0001456;4.87e-11;21!UBERON:0002203;2.29e-10;6!UBERON:0001768;2.29e-10;6!UBERON:0002200;2.29e-10;6!UBERON:0000020;4.21e-10;23!UBERON:0001032;1.08e-09;24!UBERON:0004456;1.08e-09;24!UBERON:0001801;1.12e-09;14!UBERON:0001894;5.15e-09;7!UBERON:0000955;1.69e-08;68!UBERON:0002360;2.23e-08;2!UBERON:0000094;2.23e-08;2!UBERON:0010743;2.23e-08;2!UBERON:0000073;1.16e-07;53!UBERON:0002616;1.16e-07;53!UBERON:0010371;1.69e-07;31!UBERON:0001017;3.82e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.92e-29,2;UBERON:0002757,1.92e-29,2;UBERON:0010134,1.92e-29,2;UBERON:0005408,1.92e-29,2;UBERON:0001899,1.92e-29,2;UBERON:0002037,2.12e-22,6;UBERON:0006215,2.12e-22,6;UBERON:0007625,9.50e-21,11;UBERON:0001778,6.50e-20,3;UBERON:0001775,6.50e-20,3;UBERON:0003075,1.38e-19,82;UBERON:0007284,1.38e-19,82;UBERON:0004733,1.83e-19,12;UBERON:0002028,1.83e-19,12;UBERON:0007277,1.83e-19,12;UBERON:0002346,1.23e-18,86;UBERON:0004732,5.40e-18,13;UBERON:0003076,1.22e-15,15;UBERON:0003057,1.22e-15,15;UBERON:0003296,2.96e-15,4;UBERON:0010133,2.96e-15,4;UBERON:0002784,2.96e-15,4;UBERON:0010371,2.99e-15,104;UBERON:0000488,3.42e-15,4;UBERON:0002680,3.69e-15,9;UBERON:0001895,3.69e-15,9;UBERON:0010092,3.69e-15,9;UBERON:0001017,5.12e-13,81;UBERON:0000073,1.65e-12,53;UBERON:0002616,1.65e-12,53;UBERON:0004121,1.77e-12,171;UBERON:0000924,1.77e-12,171;UBERON:0006601,1.77e-12,171;UBERON:0001049,7.97e-12,56;UBERON:0005068,7.97e-12,56;UBERON:0006241,7.97e-12,56;UBERON:0007135,7.97e-12,56;UBERON:0010314,8.56e-12,132;UBERON:0001016,1.18e-11,89;UBERON:0000019,1.45e-11,20;UBERON:0000047,1.45e-11,20;UBERON:0010312,1.45e-11,20;UBERON:0004088,1.45e-11,20;UBERON:0010230,1.45e-11,20;UBERON:0003072,1.45e-11,20;UBERON:0004128,1.45e-11,20;UBERON:0003071,1.45e-11,20;UBERON:0000970,5.00e-11,21;UBERON:0002104,5.00e-11,21;UBERON:0003056,1.07e-10,61;UBERON:0001456,1.54e-10,22;UBERON:0002203,1.90e-10,6;UBERON:0001768,1.90e-10,6;UBERON:0002200,1.90e-10,6;UBERON:0001801,1.11e-09,14;UBERON:0000020,1.11e-09,24;UBERON:0001032,1.11e-09,24;UBERON:0004456,1.11e-09,24;UBERON:0000955,1.57e-09,68;UBERON:0006238,1.57e-09,68;UBERON:0001894,4.04e-09,7;UBERON:0006222,4.04e-09,7;UBERON:0002360,2.31e-08,2;UBERON:0000094,2.31e-08,2;UBERON:0010743,2.31e-08,2;UBERON:0005085,1.51e-07,31 | |||
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| ||
|short_description=p17@PAX6 | |||
}} | }} |
Latest revision as of 14:47, 17 September 2015
Short description: | p17@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PAX6_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 11bp_to_ENST00000530714_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.50e-20 | 3 |
ciliated epithelial cell | 6.50e-20 | 3 |
multi-ciliated epithelial cell | 6.50e-20 | 3 |
non-pigmented ciliary epithelial cell | 6.50e-20 | 3 |