FFCP PHASE1:Hg19::chr10:22825620..22825656,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5305 | |EntrezGene=5305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8997 | |HGNC=8997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK023329_5end | |association_with_transcript=0bp_to_AK023329_5end | ||
|cluster_id=chr10:22825620..22825656,- | |||
|coexpression_cluster_id=C642 | |coexpression_cluster_id=C642 | ||
|description=CAGE_peak_2_at_PIP4K2A_5end | |description=CAGE_peak_2_at_PIP4K2A_5end | ||
|id=chr10:22825620..22825656,- | |id=chr10:22825620..22825656,- | ||
|ontology_enrichment_celltype=CL:0000037!1.60e-27!172;CL:0000566!1.60e-27!172;CL:0002032!1.46e-26!165;CL:0000837!1.46e-26!165;CL:0000988!8.70e-24!182;CL:0000738!5.94e-22!140;CL:0002087!1.04e-20!119;CL:0002031!1.08e-20!124;CL:0000542!1.03e-17!53;CL:0000051!1.03e-17!53;CL:0000838!1.67e-17!52;CL:0000134!1.35e-11!358;CL:0002320!2.57e-11!365;CL:0000219!4.01e-11!390;CL:0000763!9.58e-11!112;CL:0000049!9.58e-11!112;CL:0000791!8.89e-09!18;CL:0000789!8.89e-09!18;CL:0002420!8.89e-09!18;CL:0002419!8.89e-09!18;CL:0000790!8.89e-09!18;CL:0000084!1.20e-08!25;CL:0000827!1.20e-08!25;CL:0000945!1.94e-08!24;CL:0000826!1.94e-08!24;CL:0000048!3.21e-07!430;CL:0000839!6.60e-07!70;CL:0000766!6.84e-07!76 | |ontology_enrichment_celltype=CL:0000037!1.60e-27!172;CL:0000566!1.60e-27!172;CL:0002032!1.46e-26!165;CL:0000837!1.46e-26!165;CL:0000988!8.70e-24!182;CL:0000738!5.94e-22!140;CL:0002087!1.04e-20!119;CL:0002031!1.08e-20!124;CL:0000542!1.03e-17!53;CL:0000051!1.03e-17!53;CL:0000838!1.67e-17!52;CL:0000134!1.35e-11!358;CL:0002320!2.57e-11!365;CL:0000219!4.01e-11!390;CL:0000763!9.58e-11!112;CL:0000049!9.58e-11!112;CL:0000791!8.89e-09!18;CL:0000789!8.89e-09!18;CL:0002420!8.89e-09!18;CL:0002419!8.89e-09!18;CL:0000790!8.89e-09!18;CL:0000084!1.20e-08!25;CL:0000827!1.20e-08!25;CL:0000945!1.94e-08!24;CL:0000826!1.94e-08!24;CL:0000048!3.21e-07!430;CL:0000839!6.60e-07!70;CL:0000766!6.84e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000542;8.99e-10;53!CL:0000791;8.86e-09;18!CL:0000789;8.86e-09;18!CL:0002419;8.86e-09;18!CL:0000084;1.35e-08;25!CL:0000945;1.91e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.80e-29,168;CL:0002032,2.51e-28,161;CL:0000837,2.51e-28,161;CL:0000988,1.81e-25,177;CL:0000738,1.11e-23,136;CL:0002087,1.46e-22,115;CL:0002031,1.71e-22,120;CL:0000542,1.03e-17,53;CL:0000051,1.03e-17,53;CL:0000838,1.67e-17,52;CL:0000134,3.26e-12,354;CL:0000763,5.67e-12,108;CL:0000049,5.67e-12,108;CL:0002320,6.39e-12,361;CL:0000219,1.05e-11,386;CL:0000791,8.89e-09,18;CL:0000789,8.89e-09,18;CL:0002420,8.89e-09,18;CL:0002419,8.89e-09,18;CL:0000790,8.89e-09,18;CL:0000084,1.20e-08,25;CL:0000827,1.20e-08,25;CL:0000945,1.94e-08,24;CL:0000826,1.94e-08,24;CL:0000839,4.07e-08,66;CL:0000766,4.89e-08,72;CL:0000048,1.07e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;8.99e-10;53!CL:0000790;8.86e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!3.25e-08!51;DOID:0060083!3.25e-08!51 | |ontology_enrichment_disease=DOID:2531!3.25e-08!51;DOID:0060083!3.25e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.25e-08,51;DOID:0060083,3.25e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.11e-14!34;UBERON:0003528!1.11e-14!34;UBERON:0001893!1.33e-14!34;UBERON:0002791!3.85e-14!33;UBERON:0001049!7.19e-14!57;UBERON:0005068!7.19e-14!57;UBERON:0006241!7.19e-14!57;UBERON:0007135!7.19e-14!57;UBERON:0001869!2.41e-13!32;UBERON:0002780!2.01e-12!41;UBERON:0001890!2.01e-12!41;UBERON:0006240!2.01e-12!41;UBERON:0003080!1.48e-11!42;UBERON:0002616!5.31e-11!59;UBERON:0005743!6.39e-11!86;UBERON:0000955!1.30e-10!69;UBERON:0006238!1.30e-10!69;UBERON:0001017!1.73e-10!82;UBERON:0002384!3.06e-10!375;UBERON:0000956!8.45e-10!25;UBERON:0000203!8.45e-10!25;UBERON:0007023!1.10e-09!115;UBERON:0002619!1.36e-09!22;UBERON:0000073!2.41e-09!94;UBERON:0001016!2.41e-09!94;UBERON:0002390!3.60e-09!102;UBERON:0003061!3.60e-09!102;UBERON:0001950!1.57e-08!20;UBERON:0002193!1.86e-08!112;UBERON:0003075!9.89e-08!86;UBERON:0007284!9.89e-08!86 | |ontology_enrichment_uberon=UBERON:0002020!1.11e-14!34;UBERON:0003528!1.11e-14!34;UBERON:0001893!1.33e-14!34;UBERON:0002791!3.85e-14!33;UBERON:0001049!7.19e-14!57;UBERON:0005068!7.19e-14!57;UBERON:0006241!7.19e-14!57;UBERON:0007135!7.19e-14!57;UBERON:0001869!2.41e-13!32;UBERON:0002780!2.01e-12!41;UBERON:0001890!2.01e-12!41;UBERON:0006240!2.01e-12!41;UBERON:0003080!1.48e-11!42;UBERON:0002616!5.31e-11!59;UBERON:0005743!6.39e-11!86;UBERON:0000955!1.30e-10!69;UBERON:0006238!1.30e-10!69;UBERON:0001017!1.73e-10!82;UBERON:0002384!3.06e-10!375;UBERON:0000956!8.45e-10!25;UBERON:0000203!8.45e-10!25;UBERON:0007023!1.10e-09!115;UBERON:0002619!1.36e-09!22;UBERON:0000073!2.41e-09!94;UBERON:0001016!2.41e-09!94;UBERON:0002390!3.60e-09!102;UBERON:0003061!3.60e-09!102;UBERON:0001950!1.57e-08!20;UBERON:0002193!1.86e-08!112;UBERON:0003075!9.89e-08!86;UBERON:0007284!9.89e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.11e-12;34!UBERON:0003528;1.28e-12;34!UBERON:0002020;1.28e-12;34!UBERON:0002791;2.17e-12;32!UBERON:0001869;2.96e-12;32!UBERON:0000956;7.05e-10;25!UBERON:0000203;7.05e-10;25!UBERON:0002619;1.21e-09;22!UBERON:0002780;1.84e-09;41!UBERON:0001890;1.84e-09;41!UBERON:0001950;1.41e-08;20!UBERON:0000073;4.51e-08;53!UBERON:0002616;4.51e-08;53 | |||
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| ||
|short_description=p2@PIP4K2A | |short_description=p2@PIP4K2A | ||
}} | }} |
Latest revision as of 15:07, 17 September 2015
Short description: | p2@PIP4K2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIP4K2A_5end |
Coexpression cluster: | C642_Whole_blood_optic_substantia_globus_corpus_thalamus |
Association with transcript: | 0bp_to_AK023329_5end |
EntrezGene: | PIP4K2A |
HGNC: | 8997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.80e-29 | 168 |
hematopoietic oligopotent progenitor cell | 2.51e-28 | 161 |
hematopoietic multipotent progenitor cell | 2.51e-28 | 161 |
hematopoietic cell | 1.81e-25 | 177 |
leukocyte | 1.11e-23 | 136 |
nongranular leukocyte | 1.46e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.71e-22 | 120 |
lymphocyte | 1.03e-17 | 53 |
common lymphoid progenitor | 1.03e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.67e-17 | 52 |
mesenchymal cell | 3.26e-12 | 354 |
myeloid cell | 5.67e-12 | 108 |
common myeloid progenitor | 5.67e-12 | 108 |
connective tissue cell | 6.39e-12 | 361 |
motile cell | 1.05e-11 | 386 |
mature alpha-beta T cell | 8.89e-09 | 18 |
alpha-beta T cell | 8.89e-09 | 18 |
immature T cell | 8.89e-09 | 18 |
mature T cell | 8.89e-09 | 18 |
immature alpha-beta T cell | 8.89e-09 | 18 |
T cell | 1.20e-08 | 25 |
pro-T cell | 1.20e-08 | 25 |
lymphocyte of B lineage | 1.94e-08 | 24 |
pro-B cell | 1.94e-08 | 24 |
myeloid lineage restricted progenitor cell | 4.07e-08 | 66 |
myeloid leukocyte | 4.89e-08 | 72 |
multi fate stem cell | 1.07e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.10e-14 | 56 |
neural rod | 1.10e-14 | 56 |
future spinal cord | 1.10e-14 | 56 |
neural keel | 1.10e-14 | 56 |
brain grey matter | 1.11e-14 | 34 |
gray matter | 1.11e-14 | 34 |
telencephalon | 1.33e-14 | 34 |
regional part of telencephalon | 1.58e-13 | 32 |
cerebral hemisphere | 2.41e-13 | 32 |
regional part of nervous system | 2.97e-13 | 53 |
regional part of brain | 2.97e-13 | 53 |
regional part of forebrain | 2.01e-12 | 41 |
forebrain | 2.01e-12 | 41 |
anterior neural tube | 2.01e-12 | 41 |
future forebrain | 2.01e-12 | 41 |
brain | 3.27e-11 | 68 |
future brain | 3.27e-11 | 68 |
central nervous system | 5.04e-11 | 81 |
connective tissue | 8.35e-11 | 371 |
hematopoietic system | 2.47e-10 | 98 |
blood island | 2.47e-10 | 98 |
cerebral cortex | 8.45e-10 | 25 |
pallium | 8.45e-10 | 25 |
regional part of cerebral cortex | 1.36e-09 | 22 |
hemolymphoid system | 1.71e-09 | 108 |
nervous system | 2.27e-09 | 89 |
adult organism | 2.50e-09 | 114 |
neural plate | 2.71e-09 | 82 |
presumptive neural plate | 2.71e-09 | 82 |
neocortex | 1.57e-08 | 20 |
neurectoderm | 6.02e-08 | 86 |
pre-chordal neural plate | 1.28e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.25e-08 | 51 |
immune system cancer | 3.25e-08 | 51 |