FFCP PHASE1:Hg19::chr6:30652527..30652589,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:30652527..30652589,- to FFCP PHASE1:Hg19::chr6:30652527..30652589,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_BC047721_5end | |||
|cluster_id=chr6:30652527..30652589,- | |||
|description=CAGE_peak_2_at_PPP1R18_5end | |||
|id=chr6:30652527..30652589,- | |||
|ontology_enrichment_celltype=CL:0000988!8.17e-50!182;CL:0000037!1.66e-49!172;CL:0000566!1.66e-49!172;CL:0002032!2.75e-46!165;CL:0000837!2.75e-46!165;CL:0000738!4.13e-41!140;CL:0002087!1.57e-33!119;CL:0000763!1.04e-31!112;CL:0000049!1.04e-31!112;CL:0002031!1.91e-31!124;CL:0000048!5.07e-28!430;CL:0000723!1.85e-27!436;CL:0000134!8.78e-26!358;CL:0000034!2.96e-25!444;CL:0002320!5.62e-25!365;CL:0000766!2.36e-24!76;CL:0002371!3.95e-22!591;CL:0000557!1.82e-19!71;CL:0002194!3.58e-19!63;CL:0000576!3.58e-19!63;CL:0000040!3.58e-19!63;CL:0000559!3.58e-19!63;CL:0000003!5.23e-19!722;CL:0002009!5.89e-19!65;CL:0000219!9.64e-19!390;CL:0000144!2.21e-18!625;CL:0000839!2.36e-18!70;CL:0002057!5.04e-15!42;CL:0000838!5.76e-13!52;CL:0000542!1.05e-12!53;CL:0000051!1.05e-12!53;CL:0000860!1.69e-12!45;CL:0000084!2.19e-10!25;CL:0000827!2.19e-10!25;CL:0000063!2.40e-10!578;CL:0000548!3.66e-09!679;CL:0000004!3.66e-09!679;CL:0000255!3.66e-09!679;CL:0000012!3.93e-09!682;CL:0000791!7.55e-09!18;CL:0000789!7.55e-09!18;CL:0002420!7.55e-09!18;CL:0002419!7.55e-09!18;CL:0000790!7.55e-09!18;CL:0000222!2.44e-07!119;CL:0000625!3.64e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.35e-11;39!CL:0000234;1.35e-11;39!CL:0000576;4.14e-11;48!CL:0000766;4.27e-11;69!CL:0000763;6.84e-11;100!CL:0000860;1.54e-10;33!CL:0002057;1.54e-10;33!CL:0000084;2.00e-10;25!CL:0000738;7.39e-10;136!CL:0000988;3.27e-09;177!CL:0002087;3.76e-09;104!CL:0000791;6.78e-09;18!CL:0000789;6.78e-09;18!CL:0002419;6.78e-09;18!CL:0000542;7.42e-08;53!CL:0000625;3.40e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.49e-52,168;CL:0000988,8.59e-52,177;CL:0002032,1.17e-48,161;CL:0000837,1.17e-48,161;CL:0000738,1.43e-43,136;CL:0002087,6.29e-36,115;CL:0000763,4.04e-34,108;CL:0000049,4.04e-34,108;CL:0002031,1.15e-33,120;CL:0000048,1.08e-28,427;CL:0000723,3.53e-28,433;CL:0000766,5.20e-27,72;CL:0000134,1.19e-26,354;CL:0000034,6.50e-26,441;CL:0002320,8.10e-26,361;CL:0000557,7.93e-22,67;CL:0002194,9.88e-22,59;CL:0000576,9.88e-22,59;CL:0000040,9.88e-22,59;CL:0000559,9.88e-22,59;CL:0002009,1.97e-21,61;CL:0000839,1.23e-20,66;CL:0000219,1.66e-19,386;CL:0000473,3.27e-18,48;CL:0000234,3.27e-18,48;CL:0000860,4.89e-15,42;CL:0002057,4.89e-15,42;CL:0000838,5.61e-13,52;CL:0000542,1.02e-12,53;CL:0000051,1.02e-12,53;CL:0000084,2.15e-10,25;CL:0000827,2.15e-10,25;CL:0000791,7.42e-09,18;CL:0000789,7.42e-09,18;CL:0002420,7.42e-09,18;CL:0002419,7.42e-09,18;CL:0000790,7.42e-09,18;CL:0000222,2.43e-07,121;CL:0000625,3.59e-07,11;CL:0000115,6.46e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-11;42!CL:0000049;7.42e-10;108!CL:0000790;6.78e-09;18!CL:0000051;7.42e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!2.51e-10!51;DOID:0060083!2.51e-10!51;DOID:1240!1.78e-09!39;DOID:8692!1.77e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.12e-08;31!DOID:1240;2.01e-07;39!DOID:2531;9.60e-07;51!DOID:0060083;9.60e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.46e-10,51;DOID:0060083,2.46e-10,51;DOID:1240,1.75e-09,39;DOID:8692,1.74e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.70e-28!112;UBERON:0002390!1.95e-27!102;UBERON:0003061!1.95e-27!102;UBERON:0003081!2.95e-26!216;UBERON:0002384!1.61e-23!375;UBERON:0002371!8.52e-18!80;UBERON:0001474!2.97e-16!86;UBERON:0002405!3.58e-15!115;UBERON:0004765!2.87e-14!101;UBERON:0001434!2.87e-14!101;UBERON:0002204!1.18e-13!167;UBERON:0004535!3.42e-10!110;UBERON:0001009!3.19e-09!113;UBERON:0000055!3.06e-08!69;UBERON:0000178!9.53e-08!15;UBERON:0000179!9.53e-08!15;UBERON:0000463!9.53e-08!15;UBERON:0001981!1.25e-07!60;UBERON:0007500!1.25e-07!60;UBERON:0004537!1.25e-07!60;UBERON:0006965!1.25e-07!60;UBERON:0002049!2.70e-07!79;UBERON:0007798!2.70e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.27e-08;15!UBERON:0000179;9.27e-08;15!UBERON:0000463;9.27e-08;15!UBERON:0002390;3.88e-07;32 | |||
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| ||
|short_description=p2@PPP1R18 | |||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p2@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP1R18_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_BC047721_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.01e-30 | 108 |
hematopoietic system | 9.30e-30 | 98 |
blood island | 9.30e-30 | 98 |
lateral plate mesoderm | 1.78e-27 | 203 |
connective tissue | 2.59e-24 | 371 |
immune system | 4.87e-24 | 93 |
bone marrow | 8.19e-20 | 76 |
bone element | 4.85e-18 | 82 |
skeletal element | 3.26e-16 | 90 |
skeletal system | 9.50e-15 | 100 |
mesoderm | 5.48e-14 | 315 |
mesoderm-derived structure | 5.48e-14 | 315 |
presumptive mesoderm | 5.48e-14 | 315 |
musculoskeletal system | 8.70e-14 | 167 |
cardiovascular system | 4.69e-10 | 109 |
circulatory system | 4.33e-09 | 112 |
vessel | 4.19e-08 | 68 |
blood | 9.39e-08 | 15 |
haemolymphatic fluid | 9.39e-08 | 15 |
organism substance | 9.39e-08 | 15 |
epithelial tube open at both ends | 1.71e-07 | 59 |
blood vessel | 1.71e-07 | 59 |
blood vasculature | 1.71e-07 | 59 |
vascular cord | 1.71e-07 | 59 |
vasculature | 3.64e-07 | 78 |
vascular system | 3.64e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.46e-10 | 51 |
immune system cancer | 2.46e-10 | 51 |
leukemia | 1.75e-09 | 39 |
myeloid leukemia | 1.74e-08 | 31 |