FFCP PHASE1:Hg19::chr21:15588468..15588491,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54033 | |EntrezGene=54033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9897 | |HGNC=9897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461088,ENST00000495055_5end | |association_with_transcript=0bp_to_ENST00000461088,ENST00000495055_5end | ||
|cluster_id=chr21:15588468..15588491,+ | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_RBM11_5end | |description=CAGE_peak_1_at_RBM11_5end | ||
|id=chr21:15588468..15588491,+ | |id=chr21:15588468..15588491,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.49e-07!18;CL:0000789!3.49e-07!18;CL:0002420!3.49e-07!18;CL:0002419!3.49e-07!18;CL:0000790!3.49e-07!18 | |ontology_enrichment_celltype=CL:0000791!3.49e-07!18;CL:0000789!3.49e-07!18;CL:0002420!3.49e-07!18;CL:0002419!3.49e-07!18;CL:0000790!3.49e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.51e-08;18!CL:0000789;2.51e-08;18!CL:0002419;2.51e-08;18!CL:0000625;4.45e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.30e-08,18;CL:0000789,2.30e-08,18;CL:0002420,2.30e-08,18;CL:0002419,2.30e-08,18;CL:0000790,2.30e-08,18;CL:0000625,4.31e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.48e-10;82!CL:0000790;2.51e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-32!115;UBERON:0001049!4.68e-27!57;UBERON:0005068!4.68e-27!57;UBERON:0006241!4.68e-27!57;UBERON:0007135!4.68e-27!57;UBERON:0005743!2.37e-25!86;UBERON:0001017!1.53e-24!82;UBERON:0002346!2.57e-24!90;UBERON:0000073!4.03e-23!94;UBERON:0001016!4.03e-23!94;UBERON:0003075!9.83e-22!86;UBERON:0007284!9.83e-22!86;UBERON:0002616!1.42e-21!59;UBERON:0002780!1.70e-21!41;UBERON:0001890!1.70e-21!41;UBERON:0006240!1.70e-21!41;UBERON:0003080!2.22e-20!42;UBERON:0000955!1.03e-18!69;UBERON:0006238!1.03e-18!69;UBERON:0002020!1.91e-17!34;UBERON:0003528!1.91e-17!34;UBERON:0001893!3.76e-17!34;UBERON:0003056!4.70e-17!61;UBERON:0002791!1.51e-16!33;UBERON:0001869!3.74e-16!32;UBERON:0002619!1.90e-13!22;UBERON:0001950!2.20e-12!20;UBERON:0000956!2.42e-12!25;UBERON:0000203!2.42e-12!25;UBERON:0000924!1.58e-10!173;UBERON:0006601!1.58e-10!173;UBERON:0000153!9.46e-10!129;UBERON:0007811!9.46e-10!129;UBERON:0000033!2.27e-09!123;UBERON:0004121!4.71e-09!169;UBERON:0003076!7.87e-08!15;UBERON:0003057!7.87e-08!15;UBERON:0004732!9.96e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.37e-18;41!UBERON:0001890;1.37e-18;41!UBERON:0003528;1.30e-17;34!UBERON:0002020;1.30e-17;34!UBERON:0001893;1.89e-17;34!UBERON:0000073;2.32e-17;53!UBERON:0002616;2.32e-17;53!UBERON:0001869;2.71e-17;32!UBERON:0002791;3.04e-17;32!UBERON:0002619;1.46e-16;22!UBERON:0001950;3.33e-15;20!UBERON:0000956;2.06e-14;25!UBERON:0000203;2.06e-14;25!UBERON:0000955;5.23e-11;68!UBERON:0001017;9.52e-11;75!UBERON:0001016;1.76e-10;83!UBERON:0007023;1.96e-09;114!UBERON:0000125;5.26e-08;9!UBERON:0002308;5.26e-08;9!UBERON:0002420;8.47e-08;9!UBERON:0007245;8.47e-08;9!UBERON:0010009;8.47e-08;9!UBERON:0010011;8.47e-08;9!UBERON:0000454;8.47e-08;9!UBERON:0001894;5.10e-07;7 | |||
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| ||
|short_description=p1@RBM11 | |short_description=p1@RBM11 | ||
}} | }} |
Latest revision as of 18:11, 17 September 2015
Short description: | p1@RBM11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBM11_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 0bp_to_ENST00000461088, ENST00000495055_5end |
EntrezGene: | RBM11 |
HGNC: | 9897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.30e-08 | 18 |
alpha-beta T cell | 2.30e-08 | 18 |
immature T cell | 2.30e-08 | 18 |
mature T cell | 2.30e-08 | 18 |
immature alpha-beta T cell | 2.30e-08 | 18 |
CD8-positive, alpha-beta T cell | 4.31e-07 | 11 |