FFCP PHASE1:Hg19::chr13:80055378..80055401,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:80055378..80055401,+
|short_description=p5@NDFIP2
|description=CAGE_peak_5_at_NDFIP2_5end
|association_with_transcript=-186bp_to_ENST00000487865_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54602 | |EntrezGene=54602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |HGNC=18537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-186bp_to_ENST00000487865_5end | |||
|cluster_id=chr13:80055378..80055401,+ | |||
|coexpression_cluster_id=C2272 | |||
|description=CAGE_peak_5_at_NDFIP2_5end | |||
|id=chr13:80055378..80055401,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.11e-10!43;CL:0000066!5.69e-09!254;CL:0000223!1.47e-08!59;CL:0002251!1.85e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;8.23e-09;20!CL:0002076;3.15e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.41e-10,42;CL:0002251,9.47e-09,20;CL:0000223,1.16e-08,58;CL:0000066,1.37e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!3.44e-07!29;DOID:120!8.51e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:193;1.57e-07;29!DOID:120;4.74e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,3.11e-07,29;DOID:120,7.74e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-16!365;UBERON:0004121!7.50e-15!169;UBERON:0000924!1.89e-14!173;UBERON:0006601!1.89e-14!173;UBERON:0000481!1.57e-13!347;UBERON:0000064!2.32e-13!219;UBERON:0000033!5.11e-12!123;UBERON:0002780!1.22e-11!41;UBERON:0001890!1.22e-11!41;UBERON:0006240!1.22e-11!41;UBERON:0000153!2.30e-11!129;UBERON:0007811!2.30e-11!129;UBERON:0000062!2.73e-11!511;UBERON:0002616!5.34e-11!59;UBERON:0003080!6.24e-11!42;UBERON:0001893!8.63e-11!34;UBERON:0001049!1.59e-10!57;UBERON:0005068!1.59e-10!57;UBERON:0006241!1.59e-10!57;UBERON:0007135!1.59e-10!57;UBERON:0001869!2.13e-10!32;UBERON:0000483!2.50e-10!309;UBERON:0000955!2.78e-10!69;UBERON:0006238!2.78e-10!69;UBERON:0002791!3.01e-10!33;UBERON:0000119!3.64e-10!312;UBERON:0002020!3.84e-10!34;UBERON:0003528!3.84e-10!34;UBERON:0000467!9.08e-10!625;UBERON:0000480!1.08e-09!626;UBERON:0005743!3.69e-09!86;UBERON:0001017!4.07e-09!82;UBERON:0000468!4.31e-09!659;UBERON:0000477!4.87e-09!286;UBERON:0002619!6.09e-09!22;UBERON:0000073!8.32e-09!94;UBERON:0001016!8.32e-09!94;UBERON:0004923!2.78e-08!57;UBERON:0004119!4.75e-08!169;UBERON:0000925!4.75e-08!169;UBERON:0006595!4.75e-08!169;UBERON:0001950!5.92e-08!20;UBERON:0003075!9.21e-08!86;UBERON:0007284!9.21e-08!86;UBERON:0003056!1.54e-07!61;UBERON:0004111!2.11e-07!241;UBERON:0002346!2.30e-07!90;UBERON:0000956!2.66e-07!25;UBERON:0000203!2.66e-07!25;UBERON:0002050!7.81e-07!605;UBERON:0005423!7.81e-07!605;UBERON:0003102!8.50e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.66e-09;32!UBERON:0001893;1.81e-09;34!UBERON:0002619;2.97e-09;22!UBERON:0002791;3.34e-09;32!UBERON:0003528;7.95e-09;34!UBERON:0002020;7.95e-09;34!UBERON:0002780;1.28e-08;41!UBERON:0001890;1.28e-08;41!UBERON:0001950;3.08e-08;20!UBERON:0000956;2.33e-07;25!UBERON:0000203;2.33e-07;25!UBERON:0000073;9.41e-07;53!UBERON:0002616;9.41e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.32e-14,171;UBERON:0000924,2.32e-14,171;UBERON:0006601,2.32e-14,171;UBERON:0011216,5.00e-14,223;UBERON:0010371,6.36e-12,104;UBERON:0002780,1.46e-11,41;UBERON:0001890,1.46e-11,41;UBERON:0003080,1.46e-11,41;UBERON:0006240,1.46e-11,41;UBERON:0001049,4.91e-11,56;UBERON:0005068,4.91e-11,56;UBERON:0006241,4.91e-11,56;UBERON:0007135,4.91e-11,56;UBERON:0000073,4.94e-11,53;UBERON:0002616,4.94e-11,53;UBERON:0000955,8.79e-11,68;UBERON:0006238,8.79e-11,68;UBERON:0001893,1.06e-10,34;UBERON:0001869,2.65e-10,32;UBERON:0003528,4.72e-10,34;UBERON:0002020,4.72e-10,34;UBERON:0002791,5.88e-10,32;UBERON:0000483,6.66e-10,306;UBERON:0000119,9.62e-10,309;UBERON:0001017,1.96e-09,81;UBERON:0002619,5.33e-09,22;UBERON:0001016,5.81e-09,89;UBERON:0004923,9.24e-09,66;UBERON:0003056,4.57e-08,61;UBERON:0001950,5.27e-08,20;UBERON:0003075,6.77e-08,82;UBERON:0007284,6.77e-08,82;UBERON:0003102,7.50e-08,99;UBERON:0002346,1.78e-07,86;UBERON:0010314,1.78e-07,132;UBERON:0004111,3.29e-07,240;UBERON:0000956,3.38e-07,25;UBERON:0000203,3.38e-07,25;UBERON:0004119,5.00e-07,160;UBERON:0000925,5.00e-07,160;UBERON:0006595,5.00e-07,160 | |||
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| ||
|short_description=p5@NDFIP2 | |||
}} | }} |
Latest revision as of 02:25, 18 September 2015
Short description: | p5@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NDFIP2_5end |
Coexpression cluster: | C2272_amniotic_chorionic_oral_glassy_colon_epidermoid_Mallassezderived |
Association with transcript: | -186bp_to_ENST00000487865_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.41e-10 | 42 |
epithelial cell of alimentary canal | 9.47e-09 | 20 |
endodermal cell | 1.16e-08 | 58 |
epithelial cell | 1.37e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 3.11e-07 | 29 |
female reproductive organ cancer | 7.74e-07 | 27 |