FFCP PHASE1:Hg19::chr7:28763873..28763898,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:28763873..28763898,+
|short_description=p7@CREB5
|description=CAGE_peak_7_at_CREB5_5end
|association_with_transcript=-18bp_to_ENST00000468813_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9586 | |EntrezGene=9586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16844 | |HGNC=16844 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000468813_5end | |||
|cluster_id=chr7:28763873..28763898,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_7_at_CREB5_5end | |||
|id=chr7:28763873..28763898,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.84e-16!42;CL:0000860!3.87e-14!45;CL:0000766!1.16e-11!76;CL:0000557!4.22e-09!71;CL:0000839!1.11e-08!70;CL:0002009!1.67e-08!65;CL:0002194!1.99e-08!63;CL:0000576!1.99e-08!63;CL:0000040!1.99e-08!63;CL:0000559!1.99e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.00e-29;33!CL:0002057;4.00e-29;33!CL:0000473;7.05e-20;39!CL:0000234;7.05e-20;39!CL:0000576;2.21e-14;48!CL:0000766;8.73e-12;69!CL:0000775;1.50e-09;3!CL:0000094;1.34e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.76e-26,42;CL:0002057,9.76e-26,42;CL:0000766,2.70e-23,72;CL:0000473,1.06e-21,48;CL:0000234,1.06e-21,48;CL:0000557,9.43e-18,67;CL:0002009,7.38e-17,61;CL:0000839,1.26e-16,66;CL:0002194,4.35e-16,59;CL:0000576,4.35e-16,59;CL:0000040,4.35e-16,59;CL:0000559,4.35e-16,59;CL:0000763,4.82e-15,108;CL:0000049,4.82e-15,108;CL:0000738,3.93e-11,136;CL:0000775,1.53e-09,3;CL:0002032,7.18e-09,161;CL:0000837,7.18e-09,161;CL:0000094,1.27e-08,8;CL:0002031,1.32e-08,120;CL:0000037,3.61e-08,168;CL:0000988,2.34e-07,177;CL:0002087,6.12e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-19;42!UBERON:0006241;3.77e-08;3!UBERON:0003057;3.77e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.68e-16!115;UBERON:0001049!1.92e-14!57;UBERON:0005068!1.92e-14!57;UBERON:0006241!1.92e-14!57;UBERON:0007135!1.92e-14!57;UBERON:0001017!4.02e-13!82;UBERON:0005743!3.68e-12!86;UBERON:0003075!1.55e-11!86;UBERON:0007284!1.55e-11!86;UBERON:0000073!2.50e-11!94;UBERON:0001016!2.50e-11!94;UBERON:0002020!4.66e-11!34;UBERON:0003528!4.66e-11!34;UBERON:0002346!5.01e-11!90;UBERON:0002780!6.31e-11!41;UBERON:0001890!6.31e-11!41;UBERON:0006240!6.31e-11!41;UBERON:0002616!8.13e-11!59;UBERON:0001893!1.30e-10!34;UBERON:0002791!2.09e-10!33;UBERON:0003080!2.22e-10!42;UBERON:0000955!2.48e-10!69;UBERON:0006238!2.48e-10!69;UBERON:0002390!1.29e-09!102;UBERON:0003061!1.29e-09!102;UBERON:0001869!1.35e-09!32;UBERON:0000467!1.65e-08!625;UBERON:0004765!1.91e-08!101;UBERON:0001434!1.91e-08!101;UBERON:0001474!1.91e-08!86;UBERON:0000062!2.01e-08!511;UBERON:0000480!2.21e-08!626;UBERON:0003056!3.41e-08!61;UBERON:0002193!3.92e-08!112;UBERON:0002371!4.61e-08!80;UBERON:0000923!7.06e-08!604;UBERON:0005291!7.06e-08!604;UBERON:0006598!7.06e-08!604;UBERON:0002532!7.06e-08!604;UBERON:0002050!9.34e-08!605;UBERON:0005423!9.34e-08!605;UBERON:0000922!1.86e-07!612;UBERON:0000468!2.18e-07!659;UBERON:0004121!3.96e-07!169;UBERON:0000956!4.15e-07!25;UBERON:0000203!4.15e-07!25;UBERON:0002619!5.25e-07!22;UBERON:0000924!5.85e-07!173;UBERON:0006601!5.85e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;3.77e-08;3!UBERON:0005174;3.77e-08;3!UBERON:0001137;3.77e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.42e-15,76;UBERON:0002390,2.07e-13,98;UBERON:0003061,2.07e-13,98;UBERON:0001474,2.76e-13,82;UBERON:0001434,8.96e-12,100;UBERON:0004765,1.58e-11,90;UBERON:0002193,1.71e-11,108;UBERON:0002405,6.00e-11,93;UBERON:0001049,1.26e-10,56;UBERON:0005068,1.26e-10,56;UBERON:0006241,1.26e-10,56;UBERON:0007135,1.26e-10,56;UBERON:0001017,1.36e-09,81;UBERON:0007023,1.74e-09,114;UBERON:0001016,3.88e-09,89;UBERON:0003528,1.13e-08,34;UBERON:0002020,1.13e-08,34;UBERON:0002240,2.99e-08,3;UBERON:0005174,2.99e-08,3;UBERON:0001137,2.99e-08,3;UBERON:0003075,9.53e-08,82;UBERON:0007284,9.53e-08,82;UBERON:0000073,1.16e-07,53;UBERON:0002616,1.16e-07,53;UBERON:0002346,3.61e-07,86;UBERON:0002780,5.57e-07,41;UBERON:0001890,5.57e-07,41;UBERON:0003080,5.57e-07,41;UBERON:0006240,5.57e-07,41;UBERON:0000200,5.88e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0.672325146451775,0,0,0,0,0,0,0,0.547497700291537,0.376627918784408,1.06978768047132,1.31360943119913,0.787107813136792,0,0,0.619264493264304,0,0,0,0.387336002901508,0.426507697462265,0,0,1.20326668482085,0,0,0,0,1.16318591023652,2.26725566213286,2.18325655069035,0.697287110717054,1.6446715520873,0.929119112685311,1.7261543539329,2.81776777182011,1.6553756092201,1.72372840368309,1.29096936716765,1.35426486594342,1.31769637679823,1.09162460023138,0.449446968890169,0.918251677112708,1.28371610830437,0,2.30895910130701,4.58766412529753,5.11469700639233,0.580418477257168,1.13477044938228,0.622822248995575,3.26623264833766,3.12889751052121,0.65156653411535,1.81619850790011,0.736555271975129,0.632924774881769,0.211255286311942,0,0,0.898629049171961,1.05123824989054,2.57160938715328,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.30361867064741,0,0,0.189069634328136,0.665188192387692,0.43917392846563,0.130979075497713,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.469737994575059,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0.969876340912871,0.355009592516614,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0.370353780634118,0.325808305310325,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0,0,0.088048434013226,1.03664057770386,1.58531948758658,0.75745460055828,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.399891964728228,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.27047312111232,2.60279707715243,3.09315525111078,0.502548796003046,0,13.4821264310493,23.932916736322,10.3603878359009,0.12269149171914,0,0,0.623912584592421,0.713715955188647,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0.232420756919918,0.120859449591622,0,0.368323955743585,0,0.182091168006717,0.131124414959424,0.451199612907412,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,0.366277859273374,0.165018999841176,0.574265537996172,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0,0.330569830721956,0.192190067365106,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,2.63435914367922,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.459446800413919,0.507447609232169,0,2.84823593587081,0.714695326373367,1.23408681925858,0.648473311192717,0.540031437238115,3.17250070517708,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.540911356951966,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0,1.54736358051564,0.445234820091624,0.329607748453519,0,1.39473591775749,0.276283915531148,0,0.20453736500431,0.369254416383208,0.933118762985422,0,0.179021174675609,0,0,0,0,0.969332746095218,1.11321717794222,0,0,0,0,0.1137934482855,0,0,0,0,0,1.77148277162768,0.361789315876224,1.52581736317083,0.663475559587348,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,2.66517388009317,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0,0,0,0.741412462787447,1.60515529459758,0.702793337176017,0,0.19566461893209,0.485560759068186,0,0,0.91821828489147,0.126373159256976,1.35291077473043,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0.529536760149002,0,0.137041924646751,0.19871461170299,0.189932387867636,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0,0.67952103036807,0.104602846312333,0,0,0.600420288709789,1.23214841002794,0,0,0,0.558564802544508,2.52076466412852,0.717873024576814,0.199679000498991,0.429226048136571,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0.76205998859206,0.795229689809303,1.0896272488926,0,0,0.415440338029185,1.1248694577575,0,0.182248669974074,0.335434687599266,0.157611414598396,0.0524545881349981,0,0.35857467866569,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0.113312091520126,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| ||
|short_description=p7@CREB5 | |||
}} | }} |
Latest revision as of 03:30, 18 September 2015
Short description: | p7@CREB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CREB5_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -18bp_to_ENST00000468813_5end |
EntrezGene: | CREB5 |
HGNC: | 16844 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.76e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.76e-26 | 42 |
myeloid leukocyte | 2.70e-23 | 72 |
defensive cell | 1.06e-21 | 48 |
phagocyte | 1.06e-21 | 48 |
granulocyte monocyte progenitor cell | 9.43e-18 | 67 |
macrophage dendritic cell progenitor | 7.38e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.26e-16 | 66 |
monopoietic cell | 4.35e-16 | 59 |
monocyte | 4.35e-16 | 59 |
monoblast | 4.35e-16 | 59 |
promonocyte | 4.35e-16 | 59 |
myeloid cell | 4.82e-15 | 108 |
common myeloid progenitor | 4.82e-15 | 108 |
leukocyte | 3.93e-11 | 136 |
neutrophil | 1.53e-09 | 3 |
hematopoietic oligopotent progenitor cell | 7.18e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.18e-09 | 161 |
granulocyte | 1.27e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 1.32e-08 | 120 |
hematopoietic stem cell | 3.61e-08 | 168 |
hematopoietic cell | 2.34e-07 | 177 |
nongranular leukocyte | 6.12e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.42e-15 | 76 |
hematopoietic system | 2.07e-13 | 98 |
blood island | 2.07e-13 | 98 |
bone element | 2.76e-13 | 82 |
skeletal system | 8.96e-12 | 100 |
skeletal element | 1.58e-11 | 90 |
hemolymphoid system | 1.71e-11 | 108 |
immune system | 6.00e-11 | 93 |
neural tube | 1.26e-10 | 56 |
neural rod | 1.26e-10 | 56 |
future spinal cord | 1.26e-10 | 56 |
neural keel | 1.26e-10 | 56 |
central nervous system | 1.36e-09 | 81 |
adult organism | 1.74e-09 | 114 |
nervous system | 3.88e-09 | 89 |
brain grey matter | 1.13e-08 | 34 |
gray matter | 1.13e-08 | 34 |
spinal cord | 2.99e-08 | 3 |
dorsal region element | 2.99e-08 | 3 |
dorsum | 2.99e-08 | 3 |
neural plate | 9.53e-08 | 82 |
presumptive neural plate | 9.53e-08 | 82 |
regional part of nervous system | 1.16e-07 | 53 |
regional part of brain | 1.16e-07 | 53 |
neurectoderm | 3.61e-07 | 86 |
regional part of forebrain | 5.57e-07 | 41 |
forebrain | 5.57e-07 | 41 |
anterior neural tube | 5.57e-07 | 41 |
future forebrain | 5.57e-07 | 41 |
gyrus | 5.88e-07 | 6 |