FFCP PHASE1:Hg19::chr4:5890127..5890140,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2365 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=19bp_to_ENST00000534845,uc003gip.2_5end | |||
|cluster_id=chr4:5890127..5890140,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_CRMP1_5end | |||
|id=chr4:5890127..5890140,- | |||
|ontology_enrichment_celltype=CL:0002319!7.54e-12!25;CL:0000047!1.71e-09!8;CL:0000540!3.90e-09!6;CL:0000031!3.90e-09!6;CL:0000404!3.90e-09!6;CL:0000133!5.67e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.59e-10;6!CL:0000404;2.59e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.66e-13,8;CL:0000540,2.55e-10,6;CL:0000031,2.55e-10,6;CL:0000404,2.55e-10,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.59e-10;6!UBERON:0006601;3.06e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.97e-90!82;UBERON:0005743!5.97e-88!86;UBERON:0000073!2.09e-83!94;UBERON:0001016!2.09e-83!94;UBERON:0001049!6.69e-80!57;UBERON:0005068!6.69e-80!57;UBERON:0006241!6.69e-80!57;UBERON:0007135!6.69e-80!57;UBERON:0000955!1.32e-71!69;UBERON:0006238!1.32e-71!69;UBERON:0002780!4.62e-69!41;UBERON:0001890!4.62e-69!41;UBERON:0006240!4.62e-69!41;UBERON:0003080!3.68e-67!42;UBERON:0002616!8.95e-67!59;UBERON:0003075!3.19e-62!86;UBERON:0007284!3.19e-62!86;UBERON:0002346!4.60e-61!90;UBERON:0001893!3.85e-60!34;UBERON:0002020!1.48e-59!34;UBERON:0003528!1.48e-59!34;UBERON:0002791!4.67e-58!33;UBERON:0001869!4.36e-57!32;UBERON:0003056!9.79e-53!61;UBERON:0000956!4.33e-48!25;UBERON:0000203!4.33e-48!25;UBERON:0000924!1.06e-44!173;UBERON:0006601!1.06e-44!173;UBERON:0004121!1.16e-44!169;UBERON:0002619!4.21e-43!22;UBERON:0000033!5.58e-42!123;UBERON:0001950!1.80e-39!20;UBERON:0000153!2.79e-39!129;UBERON:0007811!2.79e-39!129;UBERON:0007023!7.62e-37!115;UBERON:0000025!1.11e-16!194;UBERON:0003076!4.78e-14!15;UBERON:0003057!4.78e-14!15;UBERON:0002420!9.20e-14!9;UBERON:0007245!9.20e-14!9;UBERON:0010009!9.20e-14!9;UBERON:0010011!9.20e-14!9;UBERON:0000454!9.20e-14!9;UBERON:0000200!1.34e-13!6;UBERON:0001871!2.13e-13!7;UBERON:0002308!6.76e-13!9;UBERON:0000125!6.76e-13!9;UBERON:0002021!4.20e-12!5;UBERON:0000064!1.47e-11!219;UBERON:0004111!2.27e-11!241;UBERON:0001872!2.58e-11!5;UBERON:0000349!5.16e-11!5;UBERON:0001894!3.47e-10!7;UBERON:0006222!3.47e-10!7;UBERON:0000483!3.86e-10!309;UBERON:0009663!5.02e-10!7;UBERON:0000119!6.74e-10!312;UBERON:0000477!1.18e-09!286;UBERON:0004733!2.50e-09!12;UBERON:0002028!2.50e-09!12;UBERON:0007277!2.50e-09!12;UBERON:0000369!9.36e-09!4;UBERON:0002435!9.36e-09!4;UBERON:0000204!9.36e-09!4;UBERON:0010082!9.36e-09!4;UBERON:0004732!1.69e-08!13;UBERON:0000475!2.25e-08!365;UBERON:0002298!8.36e-08!8;UBERON:0002680!1.05e-07!9;UBERON:0001895!1.05e-07!9;UBERON:0010092!1.05e-07!9;UBERON:0000062!1.40e-07!511;UBERON:0000922!1.58e-07!612;UBERON:0002771!2.00e-07!3;UBERON:0002240!4.73e-07!3;UBERON:0005383!7.91e-07!3;UBERON:0005382!7.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.62e-73;20!UBERON:0002619;2.73e-66;22!UBERON:0000956;2.82e-58;25!UBERON:0000203;2.82e-58;25!UBERON:0001869;1.57e-49;32!UBERON:0001893;2.20e-46;34!UBERON:0002791;1.60e-44;32!UBERON:0003528;3.70e-42;34!UBERON:0002020;3.70e-42;34!UBERON:0002780;1.51e-33;41!UBERON:0001890;1.51e-33;41!UBERON:0002021;8.12e-32;5!UBERON:0000200;6.58e-26;6!UBERON:0000073;1.30e-25;53!UBERON:0002616;1.30e-25;53!UBERON:0001017;4.04e-25;75!UBERON:0000955;5.53e-25;68!UBERON:0001871;4.35e-22;6!UBERON:0001016;4.57e-19;83!UBERON:0002771;4.19e-13;2!UBERON:0001872;6.91e-12;5!UBERON:0001870;2.28e-09;3!UBERON:0007023;2.86e-08;114!UBERON:0011216;4.90e-08;132!UBERON:0002902;8.28e-08;1!UBERON:0009899;8.28e-08;1!UBERON:0002581;1.18e-07;1!UBERON:0007190;1.18e-07;1!UBERON:0001882;2.17e-07;1!UBERON:0002022;2.17e-07;1!UBERON:0003112;2.17e-07;1!UBERON:0011158;2.17e-07;1!UBERON:0003128;2.17e-07;1!UBERON:0005403;2.17e-07;1!UBERON:0001703;2.17e-07;1!UBERON:0002241;2.17e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.86e-73,20;UBERON:0002619,1.27e-66,22;UBERON:0000956,1.44e-58,25;UBERON:0000203,1.44e-58,25;UBERON:0001017,1.63e-58,81;UBERON:0001869,1.01e-57,32;UBERON:0001893,3.23e-54,34;UBERON:0001016,2.69e-52,89;UBERON:0002791,2.51e-51,32;UBERON:0002780,6.10e-50,41;UBERON:0001890,6.10e-50,41;UBERON:0003080,6.10e-50,41;UBERON:0006240,6.10e-50,41;UBERON:0003528,3.37e-48,34;UBERON:0002020,3.37e-48,34;UBERON:0001049,4.11e-44,56;UBERON:0005068,4.11e-44,56;UBERON:0006241,4.11e-44,56;UBERON:0007135,4.11e-44,56;UBERON:0000955,8.20e-43,68;UBERON:0006238,8.20e-43,68;UBERON:0000073,3.23e-42,53;UBERON:0002616,3.23e-42,53;UBERON:0003056,1.38e-32,61;UBERON:0002021,5.38e-32,5;UBERON:0003075,5.68e-29,82;UBERON:0007284,5.68e-29,82;UBERON:0002346,1.91e-27,86;UBERON:0000200,6.76e-26,6;UBERON:0004121,3.18e-25,171;UBERON:0000924,3.18e-25,171;UBERON:0006601,3.18e-25,171;UBERON:0001871,2.67e-22,6;UBERON:0010371,5.20e-22,104;UBERON:0011216,2.15e-21,223;UBERON:0007023,9.49e-20,114;UBERON:0010314,2.62e-18,132;UBERON:0002771,3.27e-13,2;UBERON:0001872,7.88e-12,5;UBERON:0000025,4.93e-10,192;UBERON:0001870,2.33e-09,3;UBERON:0002902,8.84e-08,1;UBERON:0009899,8.84e-08,1;UBERON:0002581,1.30e-07,1;UBERON:0007190,1.39e-07,1;UBERON:0002022,1.69e-07,1;UBERON:0003112,2.04e-07,1;UBERON:0011158,2.04e-07,1;UBERON:0003128,2.04e-07,1;UBERON:0001703,2.04e-07,1;UBERON:0002241,2.04e-07,1;UBERON:0004761,2.04e-07,1;UBERON:0009617,2.04e-07,1;UBERON:0001882,2.80e-07,1;UBERON:0005403,2.80e-07,1;UBERON:0004111,3.36e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940364164434263,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,4.63973287666617,2.51274398001523,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,1.02044907978036,7.98455192004777,0,0,0,0,0,0,0,0.583209226766509,0.173624994933292,0.885741385813839,0.241192877250816,0,0.663475559587348,1.47773809476774,3.72955175161753,0,0.697118721393016,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0,0,7.03967351750127,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,1.70939149080872,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0.407992870545287,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.275078873194468,0,0,0,1.94398581305679,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,4.43034089983493,1.95242023843141,0.751145584238999,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0.646948868380091,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,2.8339315265117,1.91560630868582,3.89721092057435,10.8390829375339,3.25039086581824,1.77623210195036,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.02612753855184,0.781078098613847,0.620060389503552,1.33173201407204,3.82882366312754,0,0,0.175871244359621,0,3.21421101526972,0,0.606965604236632,0.227662191351298,0,0,0,0.815636795721981,2.03895598044832,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0.285906176706625,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.437119121007915,1.88126918544609,0,0.235676547101626,0.392616934229891,0.297046400327086,2.113278637917,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,2.65166811744567,12.6541700198709,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p5@CRMP1 | |||
}} |
Latest revision as of 03:57, 18 September 2015
Short description: | p5@CRMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CRMP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 19bp_to_ENST00000534845, uc003gip.2_5end |
EntrezGene: | CRMP1 |
HGNC: | 2365 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.66e-13 | 8 |
neuron | 2.55e-10 | 6 |
neuroblast | 2.55e-10 | 6 |
electrically signaling cell | 2.55e-10 | 6 |